Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 4.5e-95 351.3 182 100.0
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.1e-72 276.9 185 82.7
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 2.4e-72 275.8 185 82.2
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 9.1e-72 273.9 185 82.2
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 2.7e-63 245.7 193 72.5
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 2.8e-44 182.6 195 53.3
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 5.2e-43 178.3 160 56.9
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 8.9e-43 177.6 108 76.9
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.3e-41 173.7 124 72.6
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.2e-41 172.9 108 75.9
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 3.7e-41 172.2 111 72.1
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 6.4e-41 171.4 108 77.8
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.4e-40 170.2 143 60.1
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.2e-39 167.2 97 84.5
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.2e-39 167.2 173 54.3
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 1.6e-39 166.8 178 54.5
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.6e-39 166.8 173 54.3
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.1e-39 166.4 200 49.5
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 2.7e-39 166.0 118 70.3
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 7.8e-39 164.5 112 69.6
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.0e-38 164.1 160 58.1
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.0e-38 164.1 113 71.7
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.3e-38 163.7 112 70.5
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 1.7e-38 163.3 182 50.0
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.0e-38 162.5 126 65.9
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.0e-38 162.5 126 65.9
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 3.0e-38 162.5 166 54.2
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 3.0e-38 162.5 185 50.8
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 5.1e-38 161.8 109 73.4
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 5.1e-38 161.8 168 52.4
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 8.6e-38 161.0 127 63.8
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 1.1e-37 160.6 157 54.8
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.5e-37 160.2 170 51.8
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 1.5e-37 160.2 108 68.5
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.5e-37 160.2 165 53.3
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.5e-37 159.5 109 72.5
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 2.5e-37 159.5 165 51.5
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 3.3e-37 159.1 112 68.8
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 3.3e-37 159.1 179 50.8
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 4.3e-37 158.7 163 53.4
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 5.6e-37 158.3 108 67.6
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.6e-37 158.3 108 68.5
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 5.6e-37 158.3 173 50.9
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 5.6e-37 158.3 190 48.4
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 7.3e-37 157.9 125 64.8
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 7.3e-37 157.9 168 50.6
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 9.5e-37 157.5 109 71.6
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.2e-36 157.1 108 63.9
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.6e-36 156.8 170 54.1
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.6e-36 156.8 127 63.8
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.6e-36 156.8 127 63.8
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 1.6e-36 156.8 171 55.0
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.1e-36 156.4 105 74.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 2.8e-36 156.0 105 74.3
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 2.8e-36 156.0 100 72.0
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.8e-36 156.0 107 72.0
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 4.7e-36 155.2 106 69.8
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 6.2e-36 154.8 131 64.1
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 6.2e-36 154.8 131 64.1
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 8.1e-36 154.5 105 73.3
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 8.1e-36 154.5 131 63.4
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 1.1e-35 154.1 105 72.4
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.8e-35 153.3 114 68.4
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 4.0e-35 152.1 114 66.7
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 4.0e-35 152.1 166 50.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 6.8e-35 151.4 193 47.2
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 8.9e-35 151.0 113 65.5
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 8.9e-35 151.0 118 64.4
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.2e-34 150.6 105 70.5
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.2e-34 150.6 112 65.2
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.5e-34 150.2 110 67.3
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.5e-34 150.2 110 67.3
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 2.0e-34 149.8 159 51.6
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.4e-34 149.1 94 73.4
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 3.4e-34 149.1 135 54.8
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 7.6e-34 147.9 110 66.4
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 9.9e-34 147.5 97 75.3
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.3e-33 147.1 191 47.6
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.3e-33 147.1 108 64.8
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.7e-33 146.7 184 46.7
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.2e-33 146.4 112 62.5
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 3.8e-33 145.6 95 73.7
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.8e-33 145.6 113 67.3
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.1e-32 144.1 163 50.3
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.4e-32 143.7 186 47.8
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 3.5e-31 139.0 96 69.8
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 3.5e-31 139.0 113 57.5
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.3e-30 137.1 199 44.7
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.6e-28 130.2 100 62.0
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.4e-27 127.1 119 58.0
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 3.1e-27 125.9 85 69.4
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 2.6e-26 122.9 102 59.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 4.4e-26 122.1 83 73.5
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.3e-25 120.6 102 58.8
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 1.6e-23 113.6 105 48.6
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.3e-22 109.8 100 56.0
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 6.6e-22 108.2 84 53.6
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.1e-21 107.5 87 62.1
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.3e-21 105.5 81 64.2
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 6.2e-20 101.7 76 60.5
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.4e-19 100.5 104 48.1
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 2.4e-19 99.8 61 73.8
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 8.4e-17 91.3 138 41.3
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-16 90.1 86 50.0
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.8e-10 68.6 43 72.1
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 2.7e-07 59.7 96 39.6
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.5e-07 59.3 139 33.8


User provided reference genes

Program Settings