Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1156.31 Capsicum annuum HOM05D013549 ORTHO05D003066 1.1e-117 426.8 228 100.0
CAN.G884.5 Capsicum annuum HOM05D013549 ORTHO05D000368 9.4e-50 201.1 115 90.4
Nitab4.5_0000496g0210 Nicotiana tabacum HOM05D002903 ORTHO05D003066 3.5e-36 156.0 129 70.5
Solyc05g056380.3 Solanum lycopersicum HOM05D002903 ORTHO05D003066 1.0e-35 154.5 129 71.3
Sopen05g034770 Solanum pennellii HOM05D002903 ORTHO05D003066 1.7e-35 153.7 128 70.3
Peaxi162Scf00353g00026 Petunia axillaris HOM05D002903 ORTHO05D003066 1.5e-34 150.6 118 75.4
CAN.G1156.32 Capsicum annuum HOM05D013549 ORTHO05D000368 1.2e-33 147.5 114 71.9
PGSC0003DMG400023449 Solanum tuberosum HOM05D002903 ORTHO05D003066 8.0e-33 144.8 111 76.6
Nitab4.5_0006582g0050 Nicotiana tabacum HOM05D002903 ORTHO05D003066 8.3e-30 134.8 106 73.6
CAN.G884.4 Capsicum annuum HOM05D013549 ORTHO05D000368 1.6e-28 130.6 73 87.7
CAN.G1986.10 Capsicum annuum HOM05D013549 ORTHO05D000368 2.2e-22 110.2 102 61.8
CAN.G1986.6 Capsicum annuum HOM05D013549 ORTHO05D000368 4.9e-22 109.0 102 60.8
CAN.G1986.3 Capsicum annuum HOM05D013549 ORTHO05D000368 6.4e-22 108.6 102 60.8
Oeu058296.1 Olea europaea HOM05D002903 ORTHO05D003066 4.6e-20 102.4 117 53.0
Dinv19537 Davidia involucrata HOM05D002903 ORTHO05D003066 3.3e-18 96.3 120 49.2
CAN.G1156.42 Capsicum annuum HOM05D013549 ORTHO05D000368 4.3e-18 95.9 110 52.7
Dinv24393 Davidia involucrata HOM05D002903 ORTHO05D003066 2.1e-17 93.6 131 47.3
CAN.G694.96 Capsicum annuum HOM05D000185 ORTHO05D000368 3.6e-17 92.8 110 45.5
CAN.G1921.1 Capsicum annuum HOM05D009846 ORTHO05D000368 1.2e-15 87.8 113 46.0
Peaxi162Scf00683g00240 Petunia axillaris HOM05D013549 ORTHO05D000368 3.4e-15 86.3 103 49.5
Cpa.g.sc42.173 Carica papaya HOM05D002903 ORTHO05D003066 5.8e-15 85.5 127 42.5
DCAR_014329 Daucus carota HOM05D002903 ORTHO05D003066 5.8e-15 85.5 114 44.7
Actinidia20071 Actinidia chinensis HOM05D002903 ORTHO05D003066 2.2e-14 83.6 119 49.6
GSVIVG01022345001 Vitis vinifera HOM05D002903 ORTHO05D003066 2.9e-14 83.2 122 41.0
Cfa002912 Carpinus fangiana HOM05D002903 ORTHO05D003066 8.3e-14 81.6 126 41.3
CiPaw.03G119900 Carya illinoinensis HOM05D002903 ORTHO05D003066 8.3e-14 81.6 128 43.8
Hma1.2p1_0539F.1_g174540 Hydrangea macrophylla HOM05D002903 ORTHO05D003066 1.1e-13 81.3 118 44.9
Haze_25272 Corylus avellana HOM05D002903 ORTHO05D003066 1.9e-13 80.5 126 39.7
Oeu004513.1 Olea europaea HOM05D002903 ORTHO05D003066 1.9e-13 80.5 114 47.4
Haze_25271 Corylus avellana HOM05D002903 ORTHO05D003066 2.4e-13 80.1 128 39.8
Haze_25273 Corylus avellana HOM05D002903 ORTHO05D003066 2.4e-13 80.1 128 39.8
Actinidia06611 Actinidia chinensis HOM05D002903 ORTHO05D003066 9.2e-13 78.2 119 43.7
Nn1g06302 Nelumbo nucifera HOM05D002903 ORTHO05D003066 2.1e-12 77.0 128 45.3
Nn5g28499 Nelumbo nucifera HOM05D002903 ORTHO05D003066 2.7e-12 76.6 122 42.6
Actinidia12224 Actinidia chinensis HOM05D002903 ORTHO05D003066 4.6e-12 75.9 137 42.3
SGA_v2.0_scaffold20G09019 Striga asiatica HOM05D002903 ORTHO05D003066 7.8e-12 75.1 129 38.8
Duzib187G0480 Durio zibethinus HOM05D002903 ORTHO05D003066 3.0e-11 73.2 135 40.0
CiPaw.04G081400 Carya illinoinensis HOM05D002903 ORTHO05D003066 3.9e-11 72.8 130 40.0
Gorai.012G036500 Gossypium raimondii HOM05D002903 ORTHO05D003066 3.9e-11 72.8 124 37.1
Gohir.D04G032100 Gossypium hirsutum HOM05D002903 ORTHO05D003066 5.1e-11 72.4 124 37.1
Rhsim08G0001600 Rhododendron simsii HOM05D002903 ORTHO05D003066 5.1e-11 72.4 113 46.0
MBI03_g20844_MAGBIO Magnolia biondii HOM05D002903 ORTHO05D003066 8.6e-11 71.6 122 44.3
Prupe.4G272900 Prunus persica HOM05D002903 ORTHO05D003066 8.6e-11 71.6 134 41.8
TAR376G0422 Trochodendron aralioides HOM05D002903 ORTHO05D003066 8.6e-11 71.6 113 41.6
FvH4_1g24530 Fragaria vesca HOM05D002903 ORTHO05D003066 1.5e-10 70.9 120 40.0
Glyma.14G158800 Glycine max HOM05D002903 ORTHO05D003066 1.5e-10 70.9 120 40.0
Gohir.A05G383200 Gossypium hirsutum HOM05D002903 ORTHO05D003066 1.5e-10 70.9 124 36.3
Sabra07G0085500 Salix brachista HOM05D002903 ORTHO05D003066 1.5e-10 70.9 134 39.6
FAN28G2835 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.9e-10 70.5 120 40.0
Glyma.13G036100 Glycine max HOM05D002903 ORTHO05D003066 1.9e-10 70.5 122 41.0
Peaxi162Scf00166g00626 Petunia axillaris HOM05D013549 ORTHO05D000368 1.9e-10 70.5 101 44.6
RcHm_v2.0_Chr2g0121941 Rosa chinensis HOM05D002903 ORTHO05D003066 1.9e-10 70.5 132 38.6
Atru.chr4.939 Acer truncatum HOM05D002903 ORTHO05D003066 2.5e-10 70.1 117 40.2
DCAR_001203 Daucus carota HOM05D002903 ORTHO05D003066 3.3e-10 69.7 112 44.6
QL10p043057 Quercus lobata HOM05D002903 ORTHO05D003066 3.3e-10 69.7 129 34.9
Potri.005G064700 Populus trichocarpa HOM05D002903 ORTHO05D003066 4.3e-10 69.3 138 35.5
TAR625G1102 Trochodendron aralioides HOM05D002903 ORTHO05D003066 7.3e-10 68.6 118 42.4
FAN23G0840 Fragaria x ananassa HOM05D002903 ORTHO05D003066 1.2e-09 67.8 120 39.2
Phvul.009G155800 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 1.6e-09 67.4 135 36.3
Sabra05G0053700 Salix brachista HOM05D002903 ORTHO05D003066 1.6e-09 67.4 138 36.2
Migut.H00687 Erythranthe guttata HOM05D002903 ORTHO05D003066 2.1e-09 67.0 113 39.8
FAN26G0773 Fragaria x ananassa HOM05D002903 ORTHO05D003066 2.1e-09 67.0 120 39.2
HanXRQChr11g0322701 Helianthus annuus HOM05D002903 ORTHO05D003066 2.8e-09 66.6 109 42.2
FAN19G0913 Fragaria x ananassa HOM05D002903 ORTHO05D003066 3.6e-09 66.2 122 39.3
COL.COLO4_35772 Corchorus olitorius HOM05D002903 ORTHO05D003066 1.1e-08 64.7 133 35.3
Glyma.06G154700 Glycine max HOM05D002903 ORTHO05D003066 1.1e-08 64.7 138 35.5
Thecc.01G134700 Theobroma cacao HOM05D002903 ORTHO05D003066 1.4e-08 64.3 130 38.5
VMungo1309G1474 Vigna mungo HOM05D002903 ORTHO05D003066 1.8e-08 63.9 135 34.8
Lj1g0005492 Lotus japonicus HOM05D002903 ORTHO05D003066 4.0e-08 62.8 132 38.6
Lsat_1_v5_gn_0_33040 Lactuca sativa HOM05D002903 ORTHO05D003066 8.9e-08 61.6 105 43.8
Thecc.08G137400 Theobroma cacao HOM05D002903 ORTHO05D003066 8.9e-08 61.6 129 38.0
VMungo0647G0886 Vigna mungo HOM05D002903 ORTHO05D003066 8.9e-08 61.6 129 38.0
Gorai.013G109100 Gossypium raimondii HOM05D002903 ORTHO05D003066 1.2e-07 61.2 124 34.7
Peaxi162Scf00505g00053 Petunia axillaris HOM05D002903 ORTHO05D003066 1.2e-07 61.2 112 35.7
CAN.G206.200 Capsicum annuum HOM05D009846 ORTHO05D000368 1.5e-07 60.8 103 39.8
Dinv41151 Davidia involucrata HOM05D002903 ORTHO05D003066 1.5e-07 60.8 128 34.4
Manes.12G157200 Manihot esculenta HOM05D002903 ORTHO05D003066 2.0e-07 60.5 138 34.1
Gohir.D03G062500 Gossypium hirsutum HOM05D002903 ORTHO05D003066 2.6e-07 60.1 124 33.9
Aqoxy5G02305 Aquilegia oxysepala HOM05D002903 ORTHO05D003066 3.4e-07 59.7 121 38.8
Cc10_g13350 Coffea canephora HOM05D002903 ORTHO05D003066 3.4e-07 59.7 128 37.5
Gohir.A02G112000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 3.4e-07 59.7 122 34.4
ECA232G2707 Erigeron canadensis HOM05D002903 ORTHO05D003066 4.4e-07 59.3 105 43.8
Phvul.001G065100 Phaseolus vulgaris HOM05D002903 ORTHO05D003066 4.4e-07 59.3 126 35.7
TWI79G0835 Tripterygium wilfordii HOM05D000001 ORTHO05D010162 4.4e-07 59.3 140 32.1
Gohir.D02G076000 Gossypium hirsutum HOM05D002903 ORTHO05D003066 9.9e-07 58.2 132 36.4
Gorai.005G085300 Gossypium raimondii HOM05D002903 ORTHO05D003066 9.9e-07 58.2 132 36.4
Potri.007G104500 Populus trichocarpa HOM05D002903 ORTHO05D003066 9.9e-07 58.2 128 33.6
PGR102G0277 Punica granatum HOM05D002903 ORTHO05D003066 9.9e-07 58.2 136 33.1
Lsat_1_v5_gn_0_1360 Lactuca sativa HOM05D000094 ORTHO05D001056 1.3e-06 57.8 97 43.3
Dinv25773 Davidia involucrata HOM05D002903 ORTHO05D003066 1.7e-06 57.4 127 33.1
Duzib093G1863 Durio zibethinus HOM05D002903 ORTHO05D003066 1.7e-06 57.4 130 36.2
Nitab4.5_0008281g0010 Nicotiana tabacum HOM05D002903 ORTHO05D003066 2.9e-06 56.6 147 32.0
Sc26g0002820 Simmondsia chinensis HOM05D002903 ORTHO05D003066 2.9e-06 56.6 99 44.4
CAN.G337.7 Capsicum annuum HOM05D009846 ORTHO05D000368 3.7e-06 56.2 102 41.2
CAN.G337.8 Capsicum annuum HOM05D009846 ORTHO05D000368 3.7e-06 56.2 102 41.2
Cpa.g.sc26.66 Carica papaya HOM05D002903 ORTHO05D003066 3.7e-06 56.2 121 38.0
FAN27G1654 Fragaria x ananassa HOM05D002903 ORTHO05D003066 3.7e-06 56.2 103 37.9
Lalb_Chr10g0101441 Lupinus albus HOM05D002903 ORTHO05D003066 3.7e-06 56.2 138 32.6
Eucgr.J01339 Eucalyptus grandis HOM05D002903 ORTHO05D003066 6.4e-06 55.5 121 34.7
RcHm_v2.0_Chr6g0278041 Rosa chinensis HOM05D002903 ORTHO05D003066 6.4e-06 55.5 141 32.6
CsaV3_6G031200 Cucumis sativus L. HOM05D002903 ORTHO05D003066 8.4e-06 55.1 124 34.7


User provided reference genes

Program Settings