Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1156.18 Capsicum annuum HOM05D001562 ORTHO05D001437 7.9e-34 147.1 111 100.0
Solyc11g012740.2 Solanum lycopersicum HOM05D001562 ORTHO05D001437 2.4e-22 109.0 96 68.8
Sopen11g007480 Solanum pennellii HOM05D001562 ORTHO05D001437 6.9e-22 107.5 96 67.7
Peaxi162Scf00827g00063 Petunia axillaris HOM05D001562 ORTHO05D001437 1.8e-17 92.8 97 77.3
Nitab4.5_0001296g0060 Nicotiana tabacum HOM05D001562 ORTHO05D001437 3.0e-17 92.0 117 74.4
TWI34G0920 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 9.0e-14 80.5 100 61.0
Nn2g14206 Nelumbo nucifera HOM05D001562 ORTHO05D001437 2.5e-11 72.4 98 56.1
CANSAT64G1075 Cannabis sativa HOM05D001562 ORTHO05D001437 7.2e-11 70.9 112 63.4
TWI32G0837 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 1.2e-10 70.1 95 71.6
Ciclev10031118m.g Citrus clementina HOM05D001562 ORTHO05D001437 3.6e-10 68.6 101 43.6
Glyma.05G087600 Glycine max HOM05D001562 ORTHO05D001437 7.9e-10 67.4 104 42.3
Duzib177G1059 Durio zibethinus HOM05D001562 ORTHO05D001437 1.4e-09 66.6 102 65.7
Hma1.2p1_0165F.1_g073360 Hydrangea macrophylla HOM05D001562 ORTHO05D001437 1.8e-09 66.2 98 49.0
Atru.chr2.1611 Acer truncatum HOM05D001562 ORTHO05D001437 2.3e-09 65.9 121 49.6
Cfa019883 Carpinus fangiana HOM05D001562 ORTHO05D001437 2.3e-09 65.9 99 48.5
Gohir.A11G224900 Gossypium hirsutum HOM05D001562 ORTHO05D001437 2.3e-09 65.9 129 59.7
MSTRG.6265 Avicennia marina HOM05D001562 ORTHO05D001437 3.0e-09 65.5 116 55.2
CiPaw.09G053200 Carya illinoinensis HOM05D001562 ORTHO05D001437 3.0e-09 65.5 97 60.8
Prupe.7G025900 Prunus persica HOM05D001562 ORTHO05D001437 3.9e-09 65.1 100 59.0
Dinv14556 Davidia involucrata HOM05D001562 ORTHO05D001437 5.1e-09 64.7 105 46.7
Haze_20368 Corylus avellana HOM05D001562 ORTHO05D001437 6.7e-09 64.3 99 47.5
Gohir.D11G238400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 6.7e-09 64.3 131 57.3
Glyma.03G004900 Glycine max HOM05D001562 ORTHO05D001437 8.8e-09 63.9 101 37.6
Gorai.007G252400 Gossypium raimondii HOM05D001562 ORTHO05D001437 1.1e-08 63.5 133 56.4
RcHm_v2.0_Chr3g0495551 Rosa chinensis HOM05D001562 ORTHO05D001437 1.1e-08 63.5 120 41.7
Lalb_Chr21g0317331 Lupinus albus HOM05D001562 ORTHO05D001437 1.5e-08 63.2 101 40.6
Oeu036469.1 Olea europaea HOM05D001562 ORTHO05D001437 1.9e-08 62.8 98 57.1
Duzib128G1788 Durio zibethinus HOM05D001562 ORTHO05D001437 2.5e-08 62.4 97 70.1
QL07p016005 Quercus lobata HOM05D001562 ORTHO05D001437 2.5e-08 62.4 104 40.4
CsaV3_3G039620 Cucumis sativus L. HOM05D001562 ORTHO05D001437 5.7e-08 61.2 100 40.0
Lalb_Chr06g0174171 Lupinus albus HOM05D001562 ORTHO05D001437 5.7e-08 61.2 101 41.6
AUR62036494 Chenopodium quinoa HOM05D001562 ORTHO05D001437 7.4e-08 60.8 97 44.3
VMungo1383G0082 Vigna mungo HOM05D001562 ORTHO05D001437 9.7e-08 60.5 99 38.4
MSTRG.26199 Avicennia marina HOM05D001562 ORTHO05D001437 1.3e-07 60.1 119 48.7
MD14G1012500 Malus domestica HOM05D001562 ORTHO05D001437 1.3e-07 60.1 97 58.8
Ca_04454_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 1.7e-07 59.7 112 42.9
Manes.09G134600 Manihot esculenta HOM05D001562 ORTHO05D001437 4.8e-07 58.2 89 52.8
Aqoxy1G00005 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 6.3e-07 57.8 102 51.0
Oeu039190.1 Olea europaea HOM05D001562 ORTHO05D001437 6.3e-07 57.8 119 47.1
EL10Ac5g11646 Beta vulgaris HOM05D001562 ORTHO05D001437 8.2e-07 57.4 97 37.1
AUR62037076 Chenopodium quinoa HOM05D001562 ORTHO05D001437 8.2e-07 57.4 100 35.0
TAR633G0613 Trochodendron aralioides HOM05D001562 ORTHO05D001437 8.2e-07 57.4 99 48.5
Eucgr.A02162 Eucalyptus grandis HOM05D001562 ORTHO05D001437 1.4e-06 56.6 128 46.9
MD12G1014900 Malus domestica HOM05D001562 ORTHO05D001437 1.8e-06 56.2 118 53.4
RhsimUnG0023000 Rhododendron simsii HOM05D001562 ORTHO05D001437 2.4e-06 55.8 124 49.2
Sc01g0005840 Simmondsia chinensis HOM05D001562 ORTHO05D001437 2.4e-06 55.8 99 37.4
MELO3C009704.2 Cucumis melo HOM05D001562 ORTHO05D001437 3.1e-06 55.5 100 41.0
ClCG10G016720 Citrullus lanatus HOM05D001562 ORTHO05D001437 4.1e-06 55.1 100 36.0
arahy.Tifrunner.gnm1.ann1.F8BNUE Arachis hypogaea HOM05D001562 ORTHO05D001437 5.3e-06 54.7 101 40.6
arahy.Tifrunner.gnm1.ann1.UT2HDF Arachis hypogaea HOM05D001562 ORTHO05D001437 5.3e-06 54.7 101 40.6
PGR042G2556 Punica granatum HOM05D001562 ORTHO05D001437 5.3e-06 54.7 32 68.8
CiPaw.10G044900 Carya illinoinensis HOM05D001562 ORTHO05D001437 6.9e-06 54.3 100 50.0
ECA247G2619 Erigeron canadensis HOM05D001562 ORTHO05D001437 6.9e-06 54.3 99 53.5
Psat1g088240 Pisum sativum HOM05D001562 ORTHO05D001437 9.1e-06 53.9 111 42.3
Sed0017141 Sechium edule HOM05D001562 ORTHO05D001437 9.1e-06 53.9 113 44.2


User provided reference genes

Program Settings