Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1155.33 Capsicum annuum HOM05D022522 ORTHO05D015999 2.9e-120 435.3 222 100.0
PGSC0003DMG400020591 Solanum tuberosum HOM05D022522 ORTHO05D015999 1.6e-102 376.3 221 86.9
Sopen09g035250 Solanum pennellii HOM05D022522 ORTHO05D015999 2.2e-99 365.9 221 84.2
Solyc09g092350.1 Solanum lycopersicum HOM05D022522 ORTHO05D015999 3.7e-99 365.2 221 83.7
Peaxi162Scf00047g00005 Petunia axillaris HOM05D022522 ORTHO05D015999 2.6e-76 289.3 239 67.4
CSS0044540 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 2.8e-14 83.2 209 30.1
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 5.8e-12 75.5 176 33.0
SGA_v2.0_scaffold1G00355 Striga asiatica HOM05D021624 ORTHO05D015999 2.2e-11 73.6 215 28.4
SGA_v2.0_scaffold1G00352 Striga asiatica HOM05D009637 ORTHO05D012223 4.9e-11 72.4 121 36.4
Migut.D00139 Erythranthe guttata HOM05D021624 ORTHO05D015999 1.9e-10 70.5 153 33.3
COL.COLO4_23319 Corchorus olitorius HOM05D003556 ORTHO05D003404 2.1e-09 67.0 205 25.9
AUR62025555 Chenopodium quinoa HOM05D003556 ORTHO05D003404 6.0e-09 65.5 174 30.5
Sc25g0000800 Simmondsia chinensis HOM05D003556 ORTHO05D003404 7.9e-09 65.1 199 26.6
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 1.0e-08 64.7 161 25.5
unitig_22.g5237 Utricularia gibba HOM05D021624 ORTHO05D015999 1.0e-08 64.7 207 27.1
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 1.3e-08 64.3 119 31.9
RcHm_v2.0_Chr6g0294271 Rosa chinensis HOM05D003556 ORTHO05D003404 1.3e-08 64.3 134 28.4
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 3.0e-08 63.2 158 29.1
AUR62008689 Chenopodium quinoa HOM05D003556 ORTHO05D003404 3.0e-08 63.2 155 28.4
TWI59G1361 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 3.0e-08 63.2 154 27.9
MSTRG.18138 Avicennia marina HOM05D021624 ORTHO05D015999 5.1e-08 62.4 136 32.4
FAN24G2751 Fragaria x ananassa HOM05D003556 ORTHO05D003404 8.7e-08 61.6 123 30.1
FAN15G3222 Fragaria x ananassa HOM05D003556 ORTHO05D003404 1.5e-07 60.8 123 30.1
QL12p028082 Quercus lobata HOM05D003556 ORTHO05D003404 1.5e-07 60.8 180 30.6
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 1.5e-07 60.8 193 26.4
Atru.chr5.1112 Acer truncatum HOM05D003556 ORTHO05D003404 2.5e-07 60.1 167 29.9
Sabra11G0000800 Salix brachista HOM05D003556 ORTHO05D003404 2.5e-07 60.1 123 29.3
FvH4_2g25950 Fragaria vesca HOM05D003556 ORTHO05D003404 3.3e-07 59.7 124 29.0
Rhsim13G0008900 Rhododendron simsii HOM05D003556 ORTHO05D003404 3.3e-07 59.7 169 26.0
CANSAT25G1336 Cannabis sativa HOM05D003556 ORTHO05D003404 4.3e-07 59.3 119 29.4
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 4.3e-07 59.3 134 28.4
unitig_0.g675 Utricularia gibba HOM05D021624 ORTHO05D015999 4.3e-07 59.3 140 29.3
Gohir.A08G042100 Gossypium hirsutum HOM05D003556 ORTHO05D003404 1.6e-06 57.4 139 30.9
Potri.001G127500 Populus trichocarpa HOM05D003556 ORTHO05D003404 2.1e-06 57.0 148 26.4
SHI15103 Sapria himalayana HOM05D003556 ORTHO05D003404 2.1e-06 57.0 117 30.8
Haze_04964 Corylus avellana HOM05D003556 ORTHO05D003404 3.6e-06 56.2 155 27.1
MBI19_g44106_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 4.8e-06 55.8 153 28.1
Gohir.D08G051900 Gossypium hirsutum HOM05D003556 ORTHO05D003404 6.2e-06 55.5 139 30.9
Gorai.004G052000 Gossypium raimondii HOM05D003556 ORTHO05D003404 6.2e-06 55.5 139 30.9
EL10Ac7g18176 Beta vulgaris HOM05D003556 ORTHO05D003404 8.1e-06 55.1 165 27.9
VMungo0331G0621 Vigna mungo HOM05D003556 ORTHO05D003404 8.1e-06 55.1 120 31.7


User provided reference genes

Program Settings