Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1149.5 Capsicum annuum HOM05D000009 ORTHO05D000008 4.6e-83 311.2 161 100.0
CAN.G1358.6 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-29 132.9 77 88.3
CAN.G309.40 Capsicum annuum HOM05D000009 ORTHO05D000008 2.5e-28 129.4 77 87.0
CAN.G309.27 Capsicum annuum HOM05D000009 ORTHO05D000008 3.2e-28 129.0 77 87.0
CAN.G631.55 Capsicum annuum HOM05D000009 ORTHO05D000008 3.2e-28 129.0 77 87.0
CAN.G1848.4 Capsicum annuum HOM05D000009 ORTHO05D000008 9.3e-28 127.5 77 85.7
CAN.G1848.5 Capsicum annuum HOM05D000009 ORTHO05D000008 9.3e-28 127.5 77 85.7
CAN.G2377.1 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-27 126.3 77 84.4
CAN.G3750.2 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-27 126.3 77 84.4
CAN.G631.62 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-27 126.3 72 90.3
CAN.G1632.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-26 123.6 77 81.8
CAN.G1524.11 Capsicum annuum HOM05D000009 ORTHO05D000008 1.5e-25 120.2 90 73.3
CAN.G1647.4 Capsicum annuum HOM05D000009 ORTHO05D000008 4.3e-25 118.6 77 79.2
Nitab4.5_0009634g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 5.7e-25 118.2 77 77.9
Nitab4.5_0000227g0330 Nicotiana tabacum HOM05D000009 ORTHO05D000008 7.4e-25 117.9 85 71.8
Peaxi162Scf00152g01127 Petunia axillaris HOM05D000009 ORTHO05D000008 1.7e-24 116.7 80 76.2
PGSC0003DMG400019667 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.7e-24 116.7 77 79.2
Nitab4.5_0000227g0100 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.2e-24 116.3 77 76.6
Nitab4.5_0000227g0380 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.8e-24 115.9 77 77.9
Nitab4.5_0005589g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.8e-24 115.9 77 77.9
Nitab4.5_0005589g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.8e-24 115.9 80 76.2
Nitab4.5_0006572g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.8e-24 115.9 77 77.9
Nitab4.5_0001107g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.7e-24 115.5 77 76.6
Nitab4.5_0005589g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.7e-24 115.5 77 77.9
Nitab4.5_0000023g0540 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.8e-24 115.2 78 79.5
Nitab4.5_0002914g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.8e-24 115.2 77 76.6
CAN.G742.15 Capsicum annuum HOM05D000009 ORTHO05D000008 6.3e-24 114.8 77 77.9
Nitab4.5_0004261g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.3e-24 114.8 77 77.9
Nitab4.5_0010433g0010 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.3e-24 114.8 77 75.3
Nitab4.5_0011718g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.3e-24 114.8 77 76.6
Peaxi162Scf00773g00123 Petunia axillaris HOM05D000009 ORTHO05D000008 6.3e-24 114.8 80 72.5
PGSC0003DMG400027407 Solanum tuberosum HOM05D000009 ORTHO05D000008 1.8e-23 113.2 77 74.0
Solyc11g071420.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.4e-23 112.8 77 75.3
PGSC0003DMG400018693 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.1e-23 112.5 77 77.9
PGSC0003DMG402018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 3.1e-23 112.5 82 72.0
Nitab4.5_0010845g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.1e-23 112.1 77 74.0
PGSC0003DMG400007344 Solanum tuberosum HOM05D000009 ORTHO05D000008 4.1e-23 112.1 77 75.3
CAN.G963.10 Capsicum annuum HOM05D000009 ORTHO05D000008 6.9e-23 111.3 77 77.9
PGSC0003DMG400014047 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.1e-23 110.9 77 74.0
Peaxi162Scf01048g00002 Petunia axillaris HOM05D000009 ORTHO05D000008 1.2e-22 110.5 77 74.0
Sopen11g029090 Solanum pennellii HOM05D000009 ORTHO05D000008 1.2e-22 110.5 77 74.0
Solyc08g007630.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.5e-22 110.2 77 76.6
Sopen11g025550 Solanum pennellii HOM05D000009 ORTHO05D000008 1.5e-22 110.2 77 74.0
Nitab4.5_0005589g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.0e-22 109.8 77 74.0
PGSC0003DMG401018696 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.0e-22 109.8 77 76.6
CAN.G1887.3 Capsicum annuum HOM05D000009 ORTHO05D000008 3.4e-22 109.0 80 72.5
CAN.G553.4 Capsicum annuum HOM05D000009 ORTHO05D000008 3.4e-22 109.0 77 72.7
Nitab4.5_0011718g0040 Nicotiana tabacum HOM05D000009 ORTHO05D000008 4.5e-22 108.6 77 74.0
Sopen08g003590 Solanum pennellii HOM05D000009 ORTHO05D000008 4.5e-22 108.6 77 75.3
Sopen11g028360 Solanum pennellii HOM05D000009 ORTHO05D000008 7.7e-22 107.8 81 67.9
Sopen11g029100 Solanum pennellii HOM05D000009 ORTHO05D000008 7.7e-22 107.8 77 74.0
Nitab4.5_0003550g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.0e-21 107.5 83 68.7
Sopen11g027000 Solanum pennellii HOM05D000009 ORTHO05D000008 1.0e-21 107.5 77 75.3
Nitab4.5_0006572g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.3e-21 107.1 77 70.1
Nitab4.5_0014415g0020 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.3e-21 107.1 77 71.4
Peaxi162Scf01090g00130 Petunia axillaris HOM05D000009 ORTHO05D000008 1.3e-21 107.1 77 72.7
Sopen11g024570 Solanum pennellii HOM05D000009 ORTHO05D000008 1.3e-21 107.1 76 68.4
Nitab4.5_0000613g0070 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.7e-21 106.7 77 72.7
Sopen11g020860 Solanum pennellii HOM05D000009 ORTHO05D000008 1.7e-21 106.7 77 72.7
PGSC0003DMG401027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.2e-21 106.3 77 72.7
PGSC0003DMG402027402 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.2e-21 106.3 77 72.7
Solyc11g064770.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 2.9e-21 105.9 76 68.4
PGSC0003DMG401018576 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.0e-21 105.1 77 72.7
Solyc11g072000.2 Solanum lycopersicum HOM05D000009 ORTHO05D000008 6.5e-21 104.8 77 71.4
CAN.G309.43 Capsicum annuum HOM05D000009 ORTHO05D000008 1.1e-20 104.0 77 71.4
Nitab4.5_0000890g0110 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.1e-20 104.0 82 65.9
Sopen11g030120 Solanum pennellii HOM05D000009 ORTHO05D000008 1.1e-20 104.0 77 72.7
Peaxi162Scf00757g00423 Petunia axillaris HOM05D000009 ORTHO05D000008 1.9e-20 103.2 80 68.8
Peaxi162Scf00637g00219 Petunia axillaris HOM05D000009 ORTHO05D000008 2.5e-20 102.8 77 71.4
Peaxi162Scf00757g00425 Petunia axillaris HOM05D000009 ORTHO05D000008 2.5e-20 102.8 77 71.4
Peaxi162Scf54193g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 2.5e-20 102.8 77 71.4
PGSC0003DMG400018720 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.5e-20 102.8 77 70.1
Nitab4.5_0000023g0520 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.2e-20 102.4 77 70.1
Solyc11g069620.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 5.5e-20 101.7 77 67.5
Sopen11g028330 Solanum pennellii HOM05D000009 ORTHO05D000008 5.5e-20 101.7 77 67.5
Sopen11g028610 Solanum pennellii HOM05D000009 ORTHO05D000008 5.5e-20 101.7 77 67.5
Solyc11g068360.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 7.2e-20 101.3 77 68.8
Sopen09g016280 Solanum pennellii HOM05D000009 ORTHO05D000008 9.4e-20 100.9 77 68.8
CAN.G309.31 Capsicum annuum HOM05D000009 ORTHO05D000008 2.1e-19 99.8 78 71.8
Nitab4.5_0002355g0030 Nicotiana tabacum HOM05D000009 ORTHO05D000008 2.7e-19 99.4 77 67.5
PGSC0003DMG400019669 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.7e-19 99.4 77 67.5
Peaxi162Scf03969g00001 Petunia axillaris HOM05D000009 ORTHO05D000008 3.6e-19 99.0 72 68.1
Nitab4.5_0000075g0120 Nicotiana tabacum HOM05D000009 ORTHO05D000008 6.1e-19 98.2 77 66.2
Peaxi162Scf03637g00004 Petunia axillaris HOM05D000009 ORTHO05D000008 1.0e-18 97.4 80 61.2
CAN.G553.7 Capsicum annuum HOM05D000009 ORTHO05D000008 3.0e-18 95.9 77 70.1
Sopen11g029660 Solanum pennellii HOM05D000009 ORTHO05D000008 3.9e-18 95.5 77 66.2
Sopen11g027060 Solanum pennellii HOM05D000009 ORTHO05D000008 6.7e-18 94.7 77 66.2
CAN.G1848.3 Capsicum annuum HOM05D000009 ORTHO05D000008 8.8e-18 94.4 77 67.5
Peaxi162Scf00637g00221 Petunia axillaris HOM05D000009 ORTHO05D000008 2.0e-17 93.2 77 61.0
Peaxi162Scf00857g00009 Petunia axillaris HOM05D000009 ORTHO05D000008 5.7e-17 91.7 78 60.3
Sopen08g018720 Solanum pennellii HOM05D000009 ORTHO05D000008 2.8e-16 89.4 65 70.8
PGSC0003DMG400002980 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.8e-16 89.4 71 66.2
Nitab4.5_0000762g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 1.4e-15 87.0 51 84.3
CAN.G1524.10 Capsicum annuum HOM05D000009 ORTHO05D000008 1.3e-13 80.5 77 61.0
Peaxi162Scf00071g00945 Petunia axillaris HOM05D000009 ORTHO05D000008 1.7e-13 80.1 77 51.9
CAN.G1632.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.2e-13 79.7 77 59.7
CAN.G1149.3 Capsicum annuum HOM05D000009 ORTHO05D000008 3.8e-13 79.0 81 60.5
CAN.G1524.13 Capsicum annuum HOM05D000009 ORTHO05D000008 3.8e-13 79.0 77 61.0
CAN.G182.10 Capsicum annuum HOM05D000009 ORTHO05D000008 3.8e-13 79.0 77 63.6
CAN.G309.26 Capsicum annuum HOM05D000009 ORTHO05D000008 3.8e-13 79.0 76 63.2
Nitab4.5_0000013g0530 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.2e-12 75.9 60 63.3
CAN.G1632.8 Capsicum annuum HOM05D000009 ORTHO05D000008 4.2e-12 75.5 77 59.7
Solyc03g078300.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 4.2e-12 75.5 77 50.6
Sopen03g021050 Solanum pennellii HOM05D000009 ORTHO05D000008 4.2e-12 75.5 77 50.6
CAN.G525.34 Capsicum annuum HOM05D000009 ORTHO05D000008 5.5e-12 75.1 77 63.6
PGSC0003DMG400009455 Solanum tuberosum HOM05D000009 ORTHO05D000008 5.5e-12 75.1 77 57.1
PGSC0003DMG400013721 Solanum tuberosum HOM05D000009 ORTHO05D000008 7.2e-12 74.7 77 50.6
CAN.G1358.2 Capsicum annuum HOM05D000009 ORTHO05D000008 2.7e-11 72.8 77 59.7
Peaxi162Scf01285g00005 Petunia axillaris HOM05D000009 ORTHO05D000008 4.7e-11 72.0 80 55.0
vmacro16502 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.0e-10 70.9 71 54.9
PGSC0003DMG400027377 Solanum tuberosum HOM05D000009 ORTHO05D000008 2.3e-10 69.7 77 57.1
Nitab4.5_0000023g0490 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.9e-10 68.9 56 66.1
CAN.G742.4 Capsicum annuum HOM05D000009 ORTHO05D000008 2.6e-09 66.2 46 71.7
CAN.G631.59 Capsicum annuum HOM05D000473 ORTHO05D001219 3.3e-09 65.9 77 53.2
RhsimUnG0246100 Rhododendron simsii HOM05D000009 ORTHO05D000008 9.7e-09 64.3 71 50.7
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 1.3e-08 63.9 71 50.7
Dinv02624 Davidia involucrata HOM05D000009 ORTHO05D000008 1.7e-08 63.5 71 49.3
Rhsim07G0059500 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.2e-08 63.2 71 49.3
Hma1.2p1_0528F.1_g173070 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.8e-08 62.8 71 49.3
Dinv12555 Davidia involucrata HOM05D000009 ORTHO05D000008 3.7e-08 62.4 71 47.9
Hma1.2p1_1026F.1_g249420 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.8e-08 62.0 71 49.3
Medtr3g014080 Medicago truncatula HOM05D000009 ORTHO05D000008 4.8e-08 62.0 72 54.2
vmacro13518 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 4.8e-08 62.0 71 49.3
Cc00_g16010 Coffea canephora HOM05D000009 ORTHO05D000008 6.3e-08 61.6 71 49.3
Rhsim10G0049100 Rhododendron simsii HOM05D000009 ORTHO05D000008 6.3e-08 61.6 71 47.9
Dinv12845 Davidia involucrata HOM05D000009 ORTHO05D000008 8.2e-08 61.2 71 47.9
Dinv02621 Davidia involucrata HOM05D000009 ORTHO05D000008 1.1e-07 60.8 71 47.9
Solyc11g042750.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.1e-07 60.8 30 96.7
Cc00_g22820 Coffea canephora HOM05D000009 ORTHO05D000008 1.4e-07 60.5 77 44.2
Cc02_g29990 Coffea canephora HOM05D000009 ORTHO05D000008 1.4e-07 60.5 77 44.2
CAN.G1887.8 Capsicum annuum HOM05D000473 ORTHO05D000008 1.8e-07 60.1 85 45.9
Solyc11g069930.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 1.8e-07 60.1 46 65.2
Hma1.2p1_0573F.1_g181310 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.4e-07 59.7 71 50.7
Gorai.009G311700 Gossypium raimondii HOM05D000009 ORTHO05D000008 3.1e-07 59.3 74 47.3
Cc00_g16760 Coffea canephora HOM05D000009 ORTHO05D000008 4.1e-07 58.9 71 49.3
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 4.1e-07 58.9 71 47.9
CAN.G309.10 Capsicum annuum HOM05D000009 ORTHO05D028466 5.3e-07 58.5 65 56.9
Peaxi162Scf00857g00007 Petunia axillaris HOM05D000009 ORTHO05D000008 5.3e-07 58.5 46 65.2
Gohir.A05G294500 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.0e-07 58.2 74 45.9
Hma1.2p1_0573F.1_g181330 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.0e-07 58.2 71 49.3
Hma1.2p1_0573F.1_g181340 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.0e-07 58.2 71 49.3
Lj2g0021584 Lotus japonicus HOM05D000009 ORTHO05D000008 7.0e-07 58.2 74 45.9
RcHm_v2.0_Chr1g0349661 Rosa chinensis HOM05D000009 ORTHO05D000008 7.0e-07 58.2 71 49.3
Solyc11g043100.1 Solanum lycopersicum HOM05D000009 ORTHO05D000008 7.0e-07 58.2 68 47.1
CANSAT11G0258 Cannabis sativa HOM05D000009 ORTHO05D000008 9.1e-07 57.8 85 45.9
Hma1.2p1_0938F.1_g239270 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.1e-07 57.8 72 50.0
Rhsim03G0031500 Rhododendron simsii HOM05D000009 ORTHO05D000008 9.1e-07 57.8 71 46.5
Cc02_g29890 Coffea canephora HOM05D000009 ORTHO05D000008 1.2e-06 57.4 71 47.9
RcHm_v2.0_Chr1g0318341 Rosa chinensis HOM05D000009 ORTHO05D000008 1.2e-06 57.4 71 46.5
Eucgr.H01035 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.6e-06 57.0 75 45.3
Rhsim07G0209800 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.6e-06 57.0 71 47.9
Dinv25425 Davidia involucrata HOM05D000009 ORTHO05D000008 2.0e-06 56.6 58 51.7
MD11G1066700 Malus domestica HOM05D000009 ORTHO05D000008 2.0e-06 56.6 75 44.0
CANSAT11G0628 Cannabis sativa HOM05D000009 ORTHO05D000008 2.6e-06 56.2 73 46.6
Gohir.D05G296100 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.5e-06 55.8 71 45.1
Potri.003G200800 Populus trichocarpa HOM05D000009 ORTHO05D000008 3.5e-06 55.8 71 45.1
Rhsim07G0059900 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.5e-06 55.8 70 45.7
Rhsim07G0060500 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.5e-06 55.8 70 45.7
Cc02_g29910 Coffea canephora HOM05D000009 ORTHO05D000008 4.5e-06 55.5 77 44.2
Duzib106G1192 Durio zibethinus HOM05D000009 ORTHO05D000008 4.5e-06 55.5 74 43.2
Eucgr.L01252 Eucalyptus grandis HOM05D000009 ORTHO05D000008 4.5e-06 55.5 75 45.3
MD07G1028000 Malus domestica HOM05D000009 ORTHO05D000008 4.5e-06 55.5 74 47.3
Medtr3g014040 Medicago truncatula HOM05D000009 ORTHO05D000008 4.5e-06 55.5 71 45.1
CANSAT11G0215 Cannabis sativa HOM05D000009 ORTHO05D000008 5.9e-06 55.1 73 46.6
Cc00_g05650 Coffea canephora HOM05D000009 ORTHO05D000008 5.9e-06 55.1 72 45.8
Eucgr.H01027 Eucalyptus grandis HOM05D000009 ORTHO05D000008 5.9e-06 55.1 75 45.3
Eucgr.H01041 Eucalyptus grandis HOM05D000009 ORTHO05D000008 5.9e-06 55.1 72 45.8
Gorai.009G312700 Gossypium raimondii HOM05D000009 ORTHO05D000008 5.9e-06 55.1 71 45.1
Rhsim07G0060300 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.9e-06 55.1 70 44.3
Cpa.g.sc10.215 Carica papaya HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 45.1
COL.COLO4_28421 Corchorus olitorius HOM05D000009 ORTHO05D000008 7.7e-06 54.7 74 44.6
FvH4_7g11380 Fragaria vesca HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 46.5
Gohir.A05G296101 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 45.1
Medtr1g037730 Medicago truncatula HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 45.1
Potri.005G007001 Populus trichocarpa HOM05D000009 ORTHO05D000008 7.7e-06 54.7 72 41.7
Rhsim07G0209500 Rhododendron simsii HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 46.5
Rhsim07G0209900 Rhododendron simsii HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 46.5
Thecc.10G003900 Theobroma cacao HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 47.9
Thecc.10G004100 Theobroma cacao HOM05D000009 ORTHO05D000008 7.7e-06 54.7 71 47.9


User provided reference genes

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