Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G114.9 Capsicum annuum HOM05D003429 ORTHO05D003873 1.1e-162 576.6 300 100.0
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 2.0e-124 449.5 358 70.7
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 1.7e-123 446.4 358 70.1
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 9.3e-114 414.1 360 66.9
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 6.1e-105 384.8 358 58.9
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 3.9e-104 382.1 358 59.2
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 2.8e-102 375.9 355 58.3
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 8.2e-102 374.4 358 57.8
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 8.2e-102 374.4 358 57.8
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 1.1e-101 374.0 357 58.0
Dinv04984 Davidia involucrata HOM05D003429 ORTHO05D003873 1.1e-101 374.0 357 58.0
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 1.4e-101 373.6 358 57.5
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 3.1e-101 372.5 358 57.5
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 6.9e-101 371.3 358 57.0
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 9.0e-101 370.9 358 56.7
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 9.0e-101 370.9 357 57.4
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 1.2e-100 370.5 357 57.4
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 1.2e-100 370.5 358 57.5
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 1.5e-100 370.2 358 56.7
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 2.0e-100 369.8 358 57.3
Prupe.2G051400 Prunus persica HOM05D003429 ORTHO05D003873 3.4e-100 369.0 358 57.8
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 4.5e-100 368.6 357 56.6
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 4.5e-100 368.6 358 56.7
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 5.9e-100 368.2 357 56.6
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 7.7e-100 367.9 359 56.3
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 1.0e-99 367.5 358 55.6
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 1.0e-99 367.5 357 56.0
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 1.0e-99 367.5 358 57.3
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 1.3e-99 367.1 358 57.3
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.3e-99 367.1 358 56.7
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.3e-99 367.1 358 56.7
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 1.3e-99 367.1 357 57.7
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.7e-99 366.7 358 56.4
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 1.7e-99 366.7 358 55.6
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 1.7e-99 366.7 364 55.5
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 1.7e-99 366.7 357 56.9
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 2.2e-99 366.3 358 55.6
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 2.9e-99 365.9 358 56.4
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 2.9e-99 365.9 357 56.6
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 2.9e-99 365.9 358 57.0
VMungo1309G0597 Vigna mungo HOM05D003429 ORTHO05D003873 2.9e-99 365.9 357 55.7
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 3.8e-99 365.5 366 55.7
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 5.0e-99 365.2 358 57.5
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 5.0e-99 365.2 358 57.3
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 5.0e-99 365.2 357 55.7
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 5.0e-99 365.2 358 56.4
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 6.5e-99 364.8 358 56.7
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 6.5e-99 364.8 337 58.8
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 8.5e-99 364.4 358 55.9
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 1.1e-98 364.0 358 55.9
Cpa.g.sc33.148 Carica papaya HOM05D003429 ORTHO05D003873 1.4e-98 363.6 282 68.4
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 1.4e-98 363.6 358 55.0
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 1.4e-98 363.6 357 55.5
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 1.4e-98 363.6 358 57.0
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 1.9e-98 363.2 357 57.4
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 4.2e-98 362.1 358 55.0
DCAR_022673 Daucus carota HOM05D003429 ORTHO05D003873 5.5e-98 361.7 357 55.7
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 9.4e-98 360.9 358 55.3
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 9.4e-98 360.9 358 55.3
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 9.4e-98 360.9 357 55.2
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 9.4e-98 360.9 357 57.1
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 2.1e-97 359.8 358 55.9
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 6.1e-97 358.2 359 55.7
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 1.8e-96 356.7 359 55.2
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 1.8e-96 356.7 238 75.2
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 2.3e-96 356.3 249 71.5
Sc09g0004760 Simmondsia chinensis HOM05D003429 ORTHO05D003873 3.9e-96 355.5 358 55.3
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 6.7e-96 354.8 363 54.3
CARHR206820 Cardamine hirsuta HOM05D003429 ORTHO05D003873 2.5e-95 352.8 360 54.2
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 2.5e-95 352.8 359 55.2
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 3.3e-95 352.4 357 54.3
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 3.3e-95 352.4 358 54.2
vmacro07757 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 4.3e-95 352.1 353 55.8
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 7.4e-95 351.3 357 53.5
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 9.7e-95 350.9 359 54.3
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 1.3e-94 350.5 359 54.3
Ca_15294_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 1.3e-94 350.5 390 52.1
AUR62035521 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.7e-94 350.1 356 53.9
AUR62041296 Chenopodium quinoa HOM05D003429 ORTHO05D003873 1.7e-94 350.1 356 53.9
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 2.2e-94 349.7 358 54.5
GSVIVG01025856001 Vitis vinifera HOM05D003429 ORTHO05D003873 2.8e-94 349.4 358 55.0
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 6.3e-94 348.2 359 54.0
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 6.3e-94 348.2 359 54.0
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 6.3e-94 348.2 358 53.6
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 6.3e-94 348.2 358 53.9
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 1.1e-93 347.4 358 53.9
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 1.8e-93 346.7 357 53.5
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 2.4e-93 346.3 358 53.9
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 2.4e-93 346.3 391 51.7
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 4.1e-93 345.5 374 51.3
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 4.1e-93 345.5 358 52.8
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 4.1e-93 345.5 358 52.8
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 1.2e-92 344.0 359 53.5
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 2.0e-92 343.2 357 52.9
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 4.5e-92 342.0 322 56.8
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 1.0e-91 340.9 357 53.2
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 2.2e-91 339.7 239 70.7
Os03g0616700 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 5.0e-91 338.6 358 52.5
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 6.5e-91 338.2 401 49.6
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 8.5e-91 337.8 357 52.1
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 1.9e-90 336.7 359 52.6
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 7.2e-90 334.7 359 52.4
CDE07G0955 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 9.4e-90 334.3 248 68.1
Glyma.10G104900 Glycine max HOM05D003429 ORTHO05D003873 9.4e-90 334.3 358 51.7
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 1.2e-89 334.0 359 52.4
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 3.6e-89 332.4 359 52.1
Nitab4.5_0000211g0060 Nicotiana tabacum HOM05D003429 ORTHO05D003873 1.4e-88 330.5 236 76.7
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 1.8e-88 330.1 359 52.1
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 8.8e-88 327.8 363 52.1
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 1.1e-87 327.4 354 51.7
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 2.0e-87 326.6 358 50.6
Psat6g086480 Pisum sativum HOM05D003429 ORTHO05D003873 2.6e-87 326.2 358 50.6
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 2.6e-87 326.2 357 49.9
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 4.4e-87 325.5 358 50.3
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 6.3e-86 321.6 402 48.5
Nn7g37083 Nelumbo nucifera HOM05D003429 ORTHO05D003873 3.1e-85 319.3 306 57.2
CBR_g30950 Chara braunii HOM05D003429 ORTHO05D003873 5.3e-85 318.5 356 48.3
QL04p022427 Quercus lobata HOM05D003429 ORTHO05D003873 9.1e-85 317.8 321 55.1
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 2.5e-82 309.7 358 49.2
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 3.2e-82 309.3 251 60.6
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 4.7e-81 305.4 358 46.4
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 4.7e-81 305.4 358 49.7
AUR62020999 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.3e-80 303.1 245 62.0
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 4.4e-79 298.9 358 50.8
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 2.2e-78 296.6 326 52.1
Nitab4.5_0002094g0090 Nicotiana tabacum HOM05D003429 ORTHO05D003873 3.5e-76 289.3 250 65.6
Ca_14866_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 5.5e-74 282.0 319 50.5
HPP92_028456 Vanilla planifolia HOM05D003429 ORTHO05D003873 5.7e-71 271.9 335 49.0
MCO13G155 Micromonas commoda HOM05D003429 ORTHO05D003873 1.7e-67 260.4 385 40.0
Cfa010982 Carpinus fangiana HOM05D003429 ORTHO05D003873 2.7e-65 253.1 280 52.5
PRCOL_00000821 Prasinoderma coloniale HOM05D003429 ORTHO05D003873 3.6e-65 252.7 357 41.5
EL10Ac3g07341 Beta vulgaris HOM05D003429 ORTHO05D003873 6.8e-64 248.4 217 58.1
Haze_02953 Corylus avellana HOM05D003429 ORTHO05D003873 8.3e-62 241.5 176 72.2
Oeu055890.1 Olea europaea HOM05D003429 ORTHO05D003873 2.1e-57 226.9 143 76.2
VMungo0720G3126 Vigna mungo HOM05D003429 ORTHO05D003873 4.9e-54 215.7 170 64.1
AUR62018433 Chenopodium quinoa HOM05D003429 ORTHO05D003873 2.7e-52 209.9 264 46.6
Cre02.g141506 Chlamydomonas reinhardtii HOM05D003429 ORTHO05D003873 8.0e-49 198.4 203 51.7
HPP92_028715 Vanilla planifolia HOM05D003429 ORTHO05D003873 1.3e-27 127.9 96 64.6
Actinidia14027 Actinidia chinensis HOM05D003429 ORTHO05D003873 4.7e-25 119.4 91 65.9
Ca_28163_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 8.1e-25 118.6 189 38.6
Haze_02954 Corylus avellana HOM05D003429 ORTHO05D003873 2.0e-23 114.0 90 65.6
Lsat_1_v5_gn_8_67461 Lactuca sativa HOM05D003429 ORTHO05D003873 4.6e-20 102.8 86 57.0
SHI25005 Sapria himalayana HOM05D003429 ORTHO05D003873 1.2e-15 88.2 102 51.0
Lj9A653G52 Lonicera japonica HOM05D003429 ORTHO05D003873 1.1e-13 81.6 178 35.4
QL07p010213 Quercus lobata HOM05D002614 ORTHO05D000004 9.3e-13 78.6 47 74.5
Actinidia13983 Actinidia chinensis HOM05D003429 ORTHO05D003873 1.6e-12 77.8 39 87.2
Oeu055891.1 Olea europaea HOM05D003429 ORTHO05D003873 2.7e-12 77.0 50 74.0
AUR62018434 Chenopodium quinoa HOM05D003429 ORTHO05D003873 3.0e-11 73.6 62 61.3
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 1.1e-08 65.1 249 26.5
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 1.4e-08 64.7 250 27.2
QL04p022451 Quercus lobata HOM05D003429 ORTHO05D003873 9.0e-08 62.0 53 60.4
Nn1g02902 Nelumbo nucifera HOM05D003429 ORTHO05D003873 3.4e-07 60.1 52 59.6
GSVIVG01021243001 Vitis vinifera HOM05D003429 ORTHO05D003873 2.9e-06 57.0 66 50.0


User provided reference genes

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