Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 5.1e-235 817.4 421 100.0
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 2.6e-210 735.3 429 87.4
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 3.5e-207 724.9 431 86.1
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 3.8e-206 721.5 431 85.6
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 8.5e-206 720.3 431 85.6
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 9.2e-168 594.0 416 76.0
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 1.2e-167 593.6 386 75.6
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 7.3e-165 584.3 371 76.8
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 2.1e-164 582.8 371 76.5
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 1.9e-160 569.7 392 71.9
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 2.4e-160 569.3 377 74.3
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 7.1e-160 567.8 377 72.7
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 7.1e-160 567.8 382 72.3
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 1.2e-159 567.0 384 71.9
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 3.0e-158 562.4 378 73.0
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 1.5e-157 560.1 382 71.7
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 1.9e-157 559.7 374 71.9
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 1.6e-156 556.6 376 72.1
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 2.1e-156 556.2 376 72.3
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 6.2e-156 554.7 379 70.2
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 1.1e-155 553.9 395 69.9
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 3.1e-155 552.4 376 72.3
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 5.2e-155 551.6 377 72.7
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 1.2e-154 550.4 381 70.6
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 1.5e-154 550.1 382 71.7
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 1.5e-154 550.1 381 70.9
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 5.8e-154 548.1 381 70.6
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 7.6e-154 547.7 371 72.2
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 1.7e-153 546.6 375 72.0
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 2.9e-153 545.8 377 72.9
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 8.4e-153 544.3 379 71.2
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 1.4e-152 543.5 370 72.2
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 2.4e-152 542.7 377 71.6
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 1.6e-151 540.0 413 65.9
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 3.5e-151 538.9 367 71.1
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 1.0e-150 537.3 377 69.8
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 1.1e-149 533.9 376 69.4
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 7.3e-149 531.2 385 69.6
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 7.3e-149 531.2 372 70.2
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 9.6e-149 530.8 371 68.7
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 4.8e-148 528.5 369 69.6
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 4.8e-148 528.5 377 69.8
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.1e-147 527.3 373 68.9
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 1.8e-147 526.6 373 68.6
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 2.4e-147 526.2 391 68.8
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 4.0e-147 525.4 367 69.2
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 6.9e-147 524.6 375 68.8
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 9.0e-147 524.2 371 67.9
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 2.0e-146 523.1 376 69.1
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 2.6e-146 522.7 381 69.0
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 2.6e-146 522.7 381 69.8
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 4.5e-146 521.9 367 68.4
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 4.5e-146 521.9 381 69.6
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 4.5e-146 521.9 282 90.8
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 5.8e-146 521.5 431 65.4
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 9.9e-146 520.8 381 69.3
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 3.8e-145 518.8 370 68.6
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 7.1e-144 514.6 385 68.6
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 9.3e-144 514.2 367 67.3
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 1.2e-143 513.8 385 68.6
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 1.2e-143 513.8 385 68.6
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 7.9e-143 511.1 367 69.8
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 2.5e-141 506.1 347 71.5
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 4.3e-141 505.4 389 65.6
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.3e-141 505.4 359 69.6
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 9.6e-141 504.2 383 66.1
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 2.1e-140 503.1 374 65.8
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 6.2e-140 501.5 345 70.7
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 5.3e-139 498.4 381 67.5
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 9.0e-139 497.7 362 67.7
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 2.6e-138 496.1 374 66.3
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 3.4e-138 495.7 388 67.3
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.4e-136 490.3 373 65.4
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.9e-136 490.0 435 60.9
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 3.2e-136 489.2 321 76.0
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 9.3e-136 487.6 390 62.8
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 2.7e-135 486.1 366 64.8
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 7.9e-135 484.6 389 65.6
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 3.9e-134 482.3 379 64.1
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 1.1e-133 480.7 375 64.3
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 2.5e-133 479.6 329 71.1
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 5.8e-130 468.4 369 64.0
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 5.5e-128 461.8 319 71.5
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 9.3e-128 461.1 316 71.5
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 3.7e-124 449.1 404 58.9
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 1.3e-121 440.7 408 56.6
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 2.5e-120 436.4 346 66.8
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 2.5e-117 426.4 335 65.7
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 2.8e-116 422.9 293 70.0
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 2.6e-114 416.4 278 72.7
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 2.5e-112 409.8 314 66.6
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 1.0e-105 387.9 270 68.1
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 1.0e-102 377.9 277 69.0
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 5.2e-102 375.6 430 48.1
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 4.8e-100 369.0 415 47.7
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 2.4e-99 366.7 391 53.5
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 5.0e-97 359.0 287 63.4
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 2.7e-95 353.2 322 56.5
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 1.6e-71 274.2 327 46.8
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 4.4e-53 213.0 408 36.5
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 1.4e-46 191.4 133 72.9
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 2.3e-41 174.1 123 65.0
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 3.1e-38 163.7 106 69.8
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 2.3e-33 147.5 210 40.5
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 6.4e-28 129.4 82 75.6
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 1.0e-25 122.1 72 77.8
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 1.0e-17 95.5 55 80.0
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 9.6e-16 89.0 51 74.5
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 5.3e-14 83.2 70 51.4
Pp3c10_6850 Physcomitrium patens HOM05D002406 ORTHO05D006947 3.5e-10 70.5 356 25.6
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 7.9e-10 69.3 96 37.5
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 3.9e-09 67.0 392 24.0
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 1.5e-08 65.1 252 24.6
COL.COLO4_07869 Corchorus olitorius HOM05D002406 ORTHO05D007964 9.7e-08 62.4 325 24.3
Sed0011685 Sechium edule HOM05D002406 ORTHO05D007964 1.3e-07 62.0 324 22.2
SGA_v2.0_scaffold14G06823 Striga asiatica HOM05D002406 ORTHO05D007964 1.3e-07 62.0 251 26.3
CsaV3_5G025330 Cucumis sativus L. HOM05D002406 ORTHO05D007964 1.6e-07 61.6 253 25.7
Duzib251G0875 Durio zibethinus HOM05D002406 ORTHO05D007964 2.2e-07 61.2 255 25.9
ATR0681G159 Amborella trichopoda HOM05D002406 ORTHO05D007964 2.8e-07 60.8 316 23.7
Glyma.02G100000 Glycine max HOM05D002406 ORTHO05D007964 3.7e-07 60.5 249 24.5
TAR371G0458 Trochodendron aralioides HOM05D002406 ORTHO05D007964 3.7e-07 60.5 251 25.1
MELO3C002949.2 Cucumis melo HOM05D002406 ORTHO05D007964 4.8e-07 60.1 253 25.7
CiPaw.15G003700 Carya illinoinensis HOM05D002406 ORTHO05D007964 6.3e-07 59.7 325 23.1
TAR629G2259 Trochodendron aralioides HOM05D002406 ORTHO05D007964 6.3e-07 59.7 251 25.5
ClCG03G009900 Citrullus lanatus HOM05D002406 ORTHO05D007964 8.2e-07 59.3 252 25.0
HanXRQChr12g0364801 Helianthus annuus HOM05D002406 ORTHO05D007964 1.1e-06 58.9 309 23.6
Lalb_Chr04g0254921 Lupinus albus HOM05D002406 ORTHO05D007964 1.1e-06 58.9 327 24.2
GSVIVG01011952001 Vitis vinifera HOM05D002406 ORTHO05D007964 1.1e-06 58.9 251 25.5
Glyma.01G087900 Glycine max HOM05D002406 ORTHO05D007964 1.4e-06 58.5 249 24.5
MBI13_g34060_MAGBIO Magnolia biondii HOM05D002406 ORTHO05D007964 1.4e-06 58.5 265 24.2
Nn4g23734 Nelumbo nucifera HOM05D002406 ORTHO05D007964 1.4e-06 58.5 251 25.9
PGR119G0491 Punica granatum HOM05D002406 ORTHO05D007964 1.4e-06 58.5 326 23.9
Eucgr.G02347 Eucalyptus grandis HOM05D002406 ORTHO05D007964 1.8e-06 58.2 252 26.6
Atru.chr11.1356 Acer truncatum HOM05D002406 ORTHO05D007964 2.4e-06 57.8 251 25.5
Oeu022120.1 Olea europaea HOM05D002406 ORTHO05D007964 2.4e-06 57.8 325 23.7
HPP92_009835 Vanilla planifolia HOM05D002406 ORTHO05D007964 2.4e-06 57.8 325 22.8
QL01p045302 Quercus lobata HOM05D002406 ORTHO05D007964 5.3e-06 56.6 262 26.0
Migut.K01266 Erythranthe guttata HOM05D002406 ORTHO05D007964 6.9e-06 56.2 256 25.0
Lsat_1_v5_gn_8_38401 Lactuca sativa HOM05D002406 ORTHO05D007964 6.9e-06 56.2 251 25.1
Pp3c26_5140 Physcomitrium patens HOM05D002406 ORTHO05D007964 6.9e-06 56.2 247 23.9
TWI31G1069 Tripterygium wilfordii HOM05D002406 ORTHO05D007964 6.9e-06 56.2 329 23.1


User provided reference genes

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