Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 1.7e-279 965.3 479 100.0
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 1.7e-258 895.6 479 92.1
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 2.2e-258 895.2 479 91.9
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.6e-256 889.0 479 91.2
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 9.6e-246 853.2 472 89.6
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.3e-234 816.2 440 90.5
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 5.1e-215 751.1 406 91.1
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 1.2e-208 729.9 456 82.2
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 7.0e-196 687.6 478 70.5
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 1.0e-194 683.7 466 71.9
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 1.3e-194 683.3 471 70.9
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.8e-191 672.9 473 71.2
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 6.8e-191 671.0 511 66.5
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 5.7e-190 667.9 478 68.4
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 7.5e-190 667.5 476 69.5
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 1.8e-188 662.9 447 72.5
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 4.1e-188 661.8 474 69.0
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 1.2e-187 660.2 471 69.2
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 7.7e-187 657.5 423 75.4
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 5.0e-186 654.8 468 70.1
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 6.5e-186 654.4 472 68.2
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 1.5e-185 653.3 432 73.4
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 3.2e-185 652.1 432 72.9
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 1.6e-184 649.8 444 70.0
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 4.7e-184 648.3 479 68.1
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 8.0e-184 647.5 413 73.8
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.0e-183 647.1 492 67.1
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.8e-183 646.4 476 65.8
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 5.7e-182 641.3 472 69.3
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 4.9e-181 638.3 418 73.9
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 1.8e-180 636.3 472 66.9
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 4.1e-180 635.2 480 65.2
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 2.0e-179 632.9 413 72.6
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 2.0e-179 632.9 468 66.0
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.3e-178 630.2 468 65.6
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 3.8e-178 628.6 434 68.2
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 6.6e-178 627.9 471 64.8
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 1.9e-177 626.3 437 68.0
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 2.5e-177 625.9 426 69.7
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 3.3e-177 625.5 435 70.8
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 1.6e-176 623.2 477 67.1
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 3.6e-176 622.1 411 72.7
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 1.0e-175 620.5 505 64.2
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 1.8e-175 619.8 437 69.8
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 1.8e-172 609.8 471 62.8
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 2.4e-172 609.4 460 64.3
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 3.2e-172 609.0 477 65.8
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 4.1e-172 608.6 482 63.9
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 5.0e-170 601.7 449 64.8
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.1e-169 600.5 435 68.0
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 7.3e-169 597.8 421 67.0
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 1.2e-168 597.0 407 71.3
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 1.6e-168 596.7 447 65.1
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 2.8e-168 595.9 434 67.1
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 2.3e-167 592.8 441 66.0
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 8.9e-167 590.9 414 70.0
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 1.2e-166 590.5 426 64.8
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 2.0e-166 589.7 405 71.9
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 3.4e-166 589.0 445 64.5
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 7.5e-166 587.8 453 65.3
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.3e-165 587.0 478 61.7
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 1.3e-165 587.0 528 58.5
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 1.1e-164 583.9 418 66.5
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 2.4e-164 582.8 448 64.3
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 2.0e-163 579.7 461 62.9
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 3.9e-162 575.5 470 62.8
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 6.6e-162 574.7 484 60.3
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 1.9e-161 573.2 439 64.2
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 2.5e-161 572.8 445 63.1
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.3e-161 572.4 510 58.4
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.1e-159 567.4 472 62.5
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 6.8e-159 564.7 470 62.8
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 6.8e-159 564.7 444 63.5
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 6.8e-159 564.7 491 59.9
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 4.4e-158 562.0 460 60.7
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 1.3e-157 560.5 444 62.8
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 2.2e-157 559.7 453 60.0
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 3.7e-157 558.9 383 71.0
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 4.1e-156 555.4 466 61.2
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 9.2e-156 554.3 564 53.4
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.7e-155 552.7 479 59.7
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 8.6e-154 547.7 453 61.4
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 9.5e-153 544.3 348 75.6
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.6e-152 542.3 510 56.3
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.1e-151 540.8 348 75.3
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 9.6e-145 517.7 401 63.6
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 5.2e-143 511.9 404 62.1
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 2.1e-139 500.0 453 59.2
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 2.7e-139 499.6 418 57.7
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 1.7e-138 496.9 439 55.8
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 5.6e-137 491.9 404 59.9
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 5.8e-134 481.9 478 55.6
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 8.4e-133 478.0 372 64.5
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 9.3e-132 474.6 324 71.0
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 2.1e-131 473.4 417 55.9
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 3.4e-126 456.1 425 56.9
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 1.7e-117 427.2 323 66.9
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 2.7e-115 419.9 459 48.4
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 1.3e-112 411.0 307 68.1
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 1.5e-102 377.5 286 69.2
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 1.0e-101 374.8 411 47.7
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 3.7e-96 356.3 267 67.4
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 3.1e-79 300.1 191 73.3
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 9.1e-79 298.5 297 50.8
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.6e-75 287.7 241 63.5
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 4.0e-74 283.1 184 71.2
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 2.8e-72 276.9 296 54.1
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 1.8e-63 247.7 181 68.5
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 5.2e-58 229.6 191 60.7
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 7.5e-49 199.1 257 44.0
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.1e-42 178.7 130 67.7
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 5.8e-41 172.9 121 64.5
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 1.9e-39 167.9 153 58.2
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 9.2e-39 165.6 124 62.1
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 2.1e-38 164.5 152 52.6
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 1.2e-33 148.7 287 39.7
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 5.8e-33 146.4 236 37.3
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.6e-30 138.3 133 54.1
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 7.8e-30 136.0 91 64.8
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.2e-27 128.6 485 30.5
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 6.2e-27 126.3 111 54.1
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.9e-23 114.8 223 36.3
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 3.2e-23 114.0 103 52.4
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 9.6e-20 102.4 96 51.0
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 2.2e-16 91.3 56 75.0
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 4.9e-16 90.1 56 73.2
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 6.4e-16 89.7 486 25.1
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 7.1e-15 86.3 142 38.0
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.6e-14 85.1 77 49.4
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.1e-14 84.7 52 73.1
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 1.3e-13 82.0 316 25.3
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.3e-13 82.0 58 63.8
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 3.9e-13 80.5 54 66.7
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 7.6e-09 66.2 32 93.8
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 4.9e-08 63.5 31 90.3
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.9e-07 61.6 64 51.6


User provided reference genes

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