Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 1.7e-82 309.3 159 100.0
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 7.2e-65 250.8 163 82.8
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 2.3e-63 245.7 163 81.0
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.5e-62 243.0 163 79.8
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 5.5e-57 224.6 163 76.7
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 3.3e-49 198.7 125 80.8
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 7.6e-30 134.4 156 53.2
Peaxi162Scf00003g01820 Petunia axillaris HOM05D007350 ORTHO05D009323 4.1e-28 128.6 97 68.0
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 7.1e-28 127.9 137 54.0
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 2.1e-27 126.3 149 49.7
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 4.3e-25 118.6 157 51.0
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 9.6e-25 117.5 148 46.6
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 9.6e-25 117.5 157 49.7
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.2e-24 117.1 154 47.4
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 1.6e-24 116.7 97 66.0
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 2.8e-24 115.9 141 46.8
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 4.7e-24 115.2 143 46.9
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 4.7e-24 115.2 87 67.8
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 1.4e-23 113.6 100 60.0
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 1.4e-23 113.6 87 65.5
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.4e-23 113.6 87 65.5
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 3.1e-23 112.5 127 49.6
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 4.0e-23 112.1 159 46.5
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 5.2e-23 111.7 154 44.2
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 6.8e-23 111.3 98 63.3
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 8.9e-23 110.9 120 54.2
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 8.9e-23 110.9 87 64.4
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 1.5e-22 110.2 158 42.4
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.5e-22 110.2 144 47.2
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 1.5e-22 110.2 165 43.0
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 4.4e-22 108.6 87 63.2
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 4.4e-22 108.6 100 58.0
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 7.6e-22 107.8 77 71.4
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 7.6e-22 107.8 84 65.5
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 9.9e-22 107.5 125 47.2
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 9.9e-22 107.5 159 43.4
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 1.3e-21 107.1 166 43.4
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.3e-21 107.1 87 65.5
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.7e-21 106.7 144 47.2
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 1.7e-21 106.7 144 47.2
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.7e-21 106.7 103 59.2
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 1.7e-21 106.7 134 48.5
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 2.2e-21 106.3 112 51.8
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 2.9e-21 105.9 86 65.1
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 2.9e-21 105.9 106 54.7
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 6.4e-21 104.8 89 59.6
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 6.4e-21 104.8 77 72.7
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 6.4e-21 104.8 140 45.0
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 8.4e-21 104.4 107 54.2
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 8.4e-21 104.4 77 67.5
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.4e-20 103.6 144 46.5
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 1.9e-20 103.2 127 44.1
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.9e-20 103.2 104 52.9
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 2.4e-20 102.8 109 49.5
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 3.2e-20 102.4 127 44.9
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 3.2e-20 102.4 127 44.9
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 4.2e-20 102.1 144 41.7
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 4.2e-20 102.1 94 53.2
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 5.4e-20 101.7 98 57.1
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 7.1e-20 101.3 77 62.3
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 2.1e-19 99.8 88 60.2
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 2.1e-19 99.8 94 56.4
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 2.7e-19 99.4 113 48.7
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 2.7e-19 99.4 110 52.7
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 4.6e-19 98.6 83 59.0
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 6.0e-19 98.2 89 55.1
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 7.8e-19 97.8 76 61.8
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 7.8e-19 97.8 147 40.8
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 7.8e-19 97.8 93 57.0
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 1.3e-18 97.1 76 63.2
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.3e-18 97.1 76 63.2
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 1.3e-18 97.1 78 60.3
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.7e-18 96.7 89 57.3
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 1.7e-18 96.7 97 53.6
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 2.3e-18 96.3 116 48.3
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 2.3e-18 96.3 79 60.8
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 3.0e-18 95.9 79 63.3
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 3.0e-18 95.9 79 62.0
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 3.9e-18 95.5 79 60.8
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 2.5e-17 92.8 63 79.4
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 3.3e-17 92.4 76 59.2
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 7.3e-17 91.3 90 52.2
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 9.6e-17 90.9 147 39.5
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 2.8e-16 89.4 90 52.2
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 4.8e-16 88.6 76 61.8
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 4.8e-16 88.6 130 40.0
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 8.1e-16 87.8 90 51.1
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 1.4e-15 87.0 90 51.1
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 1.8e-15 86.7 76 56.6
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.4e-15 86.3 90 50.0
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 1.2e-14 84.0 70 61.4
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.5e-14 83.6 63 68.3
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.3e-13 80.5 123 35.8
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 8.4e-13 77.8 52 78.8
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 9.3e-12 74.3 120 39.2
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 3.9e-10 68.9 51 58.8
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 6.6e-10 68.2 69 53.6
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.3e-08 63.9 80 45.0
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 1.4e-07 60.5 81 44.4
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 3.1e-07 59.3 75 44.0
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 2.0e-06 56.6 56 46.4
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 2.0e-06 56.6 72 43.1


User provided reference genes

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