Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1116.13 Capsicum annuum HOM05D000533 ORTHO05D002807 1.3e-25 119.0 63 100.0
HanXRQChr08g0236071 Helianthus annuus HOM05D000533 ORTHO05D002807 1.0e-22 109.4 60 96.7
HanXRQMTg0579311 Helianthus annuus HOM05D000533 ORTHO05D002807 1.0e-22 109.4 60 96.7
Hma1.2p1_1191F.1_g265460 Hydrangea macrophylla HOM05D000533 ORTHO05D002807 1.0e-22 109.4 60 96.7
CAN.G1673.5 Capsicum annuum HOM05D000533 ORTHO05D002807 1.8e-22 108.6 60 96.7
Sed0014600 Sechium edule HOM05D000533 ORTHO05D002807 1.8e-22 108.6 60 96.7
Solyc00g094530.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.8e-22 108.6 60 96.7
Nn1g09945 Nelumbo nucifera HOM05D000533 ORTHO05D002807 3.9e-22 107.5 60 95.0
Nn1g10033 Nelumbo nucifera HOM05D000533 ORTHO05D002807 3.9e-22 107.5 60 95.0
Nn1g10159 Nelumbo nucifera HOM05D000533 ORTHO05D002807 3.9e-22 107.5 60 95.0
Nn1g10187 Nelumbo nucifera HOM05D000533 ORTHO05D002807 3.9e-22 107.5 60 95.0
PGR028G0008 Punica granatum HOM05D000533 ORTHO05D002807 3.9e-22 107.5 60 95.0
AT2G07785 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 5.1e-22 107.1 60 95.0
SHI52701 Sapria himalayana HOM05D000533 ORTHO05D002807 5.1e-22 107.1 60 95.0
Sp3g25800 Schrenkiella parvula HOM05D000533 ORTHO05D002807 5.1e-22 107.1 60 95.0
ATMG01275 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 6.7e-22 106.7 59 94.9
unitig_87.g27987 Utricularia gibba HOM05D000533 ORTHO05D002807 8.7e-22 106.3 60 95.0
SabraMtG0003500 Salix brachista HOM05D000533 ORTHO05D002807 1.1e-21 105.9 59 94.9
SHI35933 Sapria himalayana HOM05D000533 ORTHO05D002807 1.1e-21 105.9 60 95.0
SHI46653 Sapria himalayana HOM05D000533 ORTHO05D002807 1.1e-21 105.9 59 94.9
GSVIVG01006663001 Vitis vinifera HOM05D000533 ORTHO05D002807 1.1e-21 105.9 60 93.3
CAN.G1.14 Capsicum annuum HOM05D000533 ORTHO05D002807 1.5e-21 105.5 60 93.3
SHI26814 Sapria himalayana HOM05D000533 ORTHO05D002807 2.5e-21 104.8 60 91.7
BNapus_Darmor_BZH_scaffold_234p00330 Brassica napus HOM05D000533 ORTHO05D002807 3.3e-21 104.4 58 94.8
BolSC28t60336H Brassica oleracea HOM05D000533 ORTHO05D002807 3.3e-21 104.4 58 94.8
BolSC28t60400H Brassica oleracea HOM05D000533 ORTHO05D002807 3.3e-21 104.4 58 94.8
BraSC159t45722Z Brassica rapa HOM05D000533 ORTHO05D002807 3.3e-21 104.4 58 94.8
BraSC77t46641Z Brassica rapa HOM05D000533 ORTHO05D002807 3.3e-21 104.4 58 94.8
RcHm_v2.0_Chr6g0256751 Rosa chinensis HOM05D000533 ORTHO05D002807 4.3e-21 104.0 60 93.3
RcHm_v2.0_MTg0498831 Rosa chinensis HOM05D000533 ORTHO05D002807 4.3e-21 104.0 60 93.3
SHI42029 Sapria himalayana HOM05D000533 ORTHO05D002807 4.3e-21 104.0 60 93.3
Lalb_Chr00c21g0405731 Lupinus albus HOM05D000533 ORTHO05D002807 5.7e-21 103.6 60 93.3
Lalb_Chr00c24g0407091 Lupinus albus HOM05D000533 ORTHO05D002807 5.7e-21 103.6 60 93.3
SHI50269 Sapria himalayana HOM05D000533 ORTHO05D002807 5.7e-21 103.6 59 93.2
TPR.G74 Trifolium pratense HOM05D000533 ORTHO05D002807 5.7e-21 103.6 60 93.3
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 1.3e-20 102.4 55 96.4
arahy.Tifrunner.gnm1.ann1.P3P6H5 Arachis hypogaea HOM05D009044 ORTHO05D002807 2.1e-20 101.7 60 91.7
CARHR287220 Cardamine hirsuta HOM05D000533 ORTHO05D002807 2.1e-20 101.7 55 96.4
Gorai.001G164200 Gossypium raimondii HOM05D000533 ORTHO05D002807 2.8e-20 101.3 60 91.7
PSO541G4958 Papaver somniferum HOM05D000533 ORTHO05D002807 2.8e-20 101.3 58 87.9
Gorai.013G212700 Gossypium raimondii HOM05D000533 ORTHO05D002807 6.3e-20 100.1 60 90.0
Psat0s3560g0080 Pisum sativum HOM05D000533 ORTHO05D002807 8.2e-20 99.8 57 93.0
BraSC48t46261Z Brassica rapa HOM05D000533 ORTHO05D002807 1.4e-19 99.0 55 94.5
Nitab4.5_0011987g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 6.9e-19 96.7 53 94.3
Ca_03778_v3 Cicer arietinum L. HOM05D008696 ORTHO05D002807 1.5e-18 95.5 58 87.9
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.5e-18 95.5 58 87.9
Nitab4.5_0004300g0140 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.5e-18 95.5 58 87.9
Peaxi162Scf01173g00012 Petunia axillaris HOM05D000533 ORTHO05D002807 1.5e-18 95.5 52 94.2
Peaxi162Scf00489g00025 Petunia axillaris HOM05D008696 ORTHO05D002807 2.6e-18 94.7 50 98.0
Nitab4.5_0004100g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 5.9e-18 93.6 57 87.7
PSO063G0118 Papaver somniferum HOM05D000533 ORTHO05D002807 5.9e-18 93.6 60 83.3
Nitab4.5_0001796g0260 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.8e-17 90.9 56 82.1
Nitab4.5_0000338g0180 Nicotiana tabacum HOM05D000533 ORTHO05D002807 4.2e-16 87.4 53 84.9
Nitab4.5_0000307g0290 Nicotiana tabacum HOM05D000533 ORTHO05D002807 1.2e-15 85.9 47 93.6
Solyc05g023920.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.2e-15 85.9 60 76.7
Nitab4.5_0000172g1370 Nicotiana tabacum HOM05D000533 ORTHO05D002807 2.7e-15 84.7 47 91.5
Nitab4.5_0000031g0220 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.0e-14 81.3 47 91.5
SEGI_40319 Sequoiadendron giganteum HOM05D000533 ORTHO05D002807 3.3e-13 77.8 56 75.0
SEGI_30332 Sequoiadendron giganteum HOM05D000533 ORTHO05D002807 9.7e-13 76.3 55 76.4
Nitab4.5_0000172g0730 Nicotiana tabacum HOM05D000533 ORTHO05D002807 2.8e-12 74.7 47 83.0
CiPaw.16G068400 Carya illinoinensis HOM05D000533 ORTHO05D002807 4.8e-12 73.9 40 95.0
Nn1g10034 Nelumbo nucifera HOM05D000533 ORTHO05D002807 4.1e-11 70.9 36 97.2
BraSC77t46669Z Brassica rapa HOM05D000533 ORTHO05D002807 9.1e-11 69.7 38 92.1
THA.LOC104820711 Tarenaya hassleriana HOM05D000533 ORTHO05D002807 7.7e-10 66.6 57 52.6
Pp3c11_850 Physcomitrium patens HOM05D000533 ORTHO05D002807 1.0e-09 66.2 57 66.7
Nn7g35869 Nelumbo nucifera HOM05D000533 ORTHO05D002807 6.5e-09 63.5 38 84.2
Lalb_Chr07g0184511 Lupinus albus HOM05D000533 ORTHO05D002807 7.2e-08 60.1 32 93.8
Lj5g0015581 Lotus japonicus HOM05D000533 ORTHO05D002807 7.9e-07 56.6 32 87.5
CDE02G0273 Ceratophyllum demersum HOM05D000533 ORTHO05D002807 1.4e-06 55.8 29 96.6
LjContig00315g0001623 Lotus japonicus HOM05D008696 ORTHO05D002807 3.0e-06 54.7 28 96.4
Nitab4.5_0002325g0100 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.0e-06 54.7 28 96.4
SGA_v2.0_scaffold255G45330 Striga asiatica HOM05D008696 ORTHO05D002807 3.0e-06 54.7 29 93.1
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 3.0e-06 54.7 29 93.1
SHI22124 Sapria himalayana HOM05D000533 ORTHO05D002807 5.1e-06 53.9 36 77.8
SalBow1G1296 Salvia bowleyana HOM05D000533 ORTHO05D002807 8.8e-06 53.1 27 96.3
SalBow1G1594 Salvia bowleyana HOM05D000533 ORTHO05D002807 8.8e-06 53.1 27 96.3
Sc12g0004050 Simmondsia chinensis HOM05D000533 ORTHO05D002807 8.8e-06 53.1 28 92.9


User provided reference genes

Program Settings