Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1109.2 Capsicum annuum HOM05D008814 ORTHO05D010812 3.3e-80 301.6 148 100.0
CAN.G960.18 Capsicum annuum HOM05D008814 ORTHO05D010812 1.7e-76 289.3 148 95.9
Solyc00g500343.1 Solanum lycopersicum HOM05D008814 ORTHO05D010812 1.4e-73 279.6 148 94.6
Solyc08g036500.1 Solanum lycopersicum HOM05D008814 ORTHO05D010812 1.8e-73 279.3 148 93.9
CAN.G1.21 Capsicum annuum HOM05D008814 ORTHO05D010812 1.0e-68 263.5 148 89.2
PGSC0003DMG400033609 Solanum tuberosum HOM05D008814 ORTHO05D010812 1.7e-60 236.1 130 90.8
Nn117s43415 Nelumbo nucifera HOM05D008814 ORTHO05D010812 3.2e-51 205.3 110 92.7
Nn1g10110 Nelumbo nucifera HOM05D008814 ORTHO05D010812 3.2e-51 205.3 110 92.7
Nn1g10192 Nelumbo nucifera HOM05D008814 ORTHO05D010812 3.2e-51 205.3 110 92.7
Peaxi162Scf01120g00002 Petunia axillaris HOM05D008814 ORTHO05D010812 4.5e-45 184.9 152 69.7
GSVIVG01005452001 Vitis vinifera HOM05D008814 ORTHO05D010812 1.6e-42 176.4 92 92.4
Nitab4.5_0014940g0030 Nicotiana tabacum HOM05D008814 ORTHO05D010812 2.8e-39 165.6 115 76.5
Nitab4.5_0000172g1910 Nicotiana tabacum HOM05D008814 ORTHO05D010812 4.9e-39 164.9 95 81.1
BcaC02g09030 Brassica carinata HOM05D008814 ORTHO05D010812 8.3e-39 164.1 101 81.2
A04p09340 Brassica napus HOM05D008814 ORTHO05D010812 8.3e-39 164.1 101 81.2
BolSC28t60310H Brassica oleracea HOM05D008814 ORTHO05D010812 8.3e-39 164.1 101 81.2
BolSC28t60366H Brassica oleracea HOM05D008814 ORTHO05D010812 8.3e-39 164.1 101 81.2
BraSC48t46234Z Brassica rapa HOM05D008814 ORTHO05D010812 8.3e-39 164.1 101 81.2
BcaC09g49585 Brassica carinata HOM05D008814 ORTHO05D010812 2.4e-38 162.5 101 80.2
C01p34890 Brassica napus HOM05D008814 ORTHO05D010812 4.3e-35 151.8 101 76.2
C01p34810 Brassica napus HOM05D008814 ORTHO05D010812 9.5e-35 150.6 101 75.2
SHI04841 Sapria himalayana HOM05D008814 ORTHO05D010812 3.0e-33 145.6 118 67.8
CsaV3_7G023800 Cucumis sativus L. HOM05D008814 ORTHO05D010812 2.0e-32 142.9 82 84.1
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 4.1e-30 135.2 82 80.5
Sopen05g009620 Solanum pennellii HOM05D008814 ORTHO05D010812 5.4e-30 134.8 80 78.8
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 2.5e-27 125.9 67 94.0
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 8.0e-26 120.9 88 71.6
Solyc08g036535.1 Solanum lycopersicum HOM05D018954 ORTHO05D010812 4.4e-24 115.2 61 90.2
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 1.7e-23 113.2 82 70.7
Nitab4.5_0006085g0070 Nicotiana tabacum HOM05D008814 ORTHO05D010812 2.2e-23 112.8 73 82.2
Nitab4.5_0000172g1420 Nicotiana tabacum HOM05D008814 ORTHO05D010812 3.7e-23 112.1 67 85.1
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 4.1e-22 108.6 65 81.5
Nn2g10474 Nelumbo nucifera HOM05D008814 ORTHO05D010812 2.1e-21 106.3 62 83.9
Nitab4.5_0000478g0040 Nicotiana tabacum HOM05D008814 ORTHO05D010812 3.5e-21 105.5 60 86.7
Nn8g40503 Nelumbo nucifera HOM05D008814 ORTHO05D010812 1.0e-20 104.0 62 80.6
MELO3C027941.2 Cucumis melo HOM05D008814 ORTHO05D010812 3.9e-20 102.1 57 84.2
Lj2P1215T12 Lonicera japonica HOM05D008814 ORTHO05D010812 8.6e-20 100.9 59 81.4
Nn1g09507 Nelumbo nucifera HOM05D008814 ORTHO05D010812 1.1e-19 100.5 62 80.6
ATR0987G010 Amborella trichopoda HOM05D008814 ORTHO05D010812 8.1e-18 94.4 63 81.0
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 8.1e-18 94.4 63 74.6
COL.COLO4_04435 Corchorus olitorius HOM05D018954 ORTHO05D010812 5.2e-17 91.7 62 75.8
COL.COLO4_04461 Corchorus olitorius HOM05D018954 ORTHO05D010812 5.2e-17 91.7 62 75.8
COL.COLO4_04488 Corchorus olitorius HOM05D018954 ORTHO05D010812 5.2e-17 91.7 62 75.8
MELO3C013036.2 Cucumis melo HOM05D008814 ORTHO05D010812 1.4e-14 83.6 53 73.6
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 1.4e-14 83.6 99 54.5
ECA039G0011 Erigeron canadensis HOM05D005210 ORTHO05D010286 4.6e-13 78.6 39 92.3
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 4.6e-13 78.6 39 92.3
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 4.6e-13 78.6 39 92.3
Lsat_1_v5_gn_0_34981 Lactuca sativa HOM05D005210 ORTHO05D010286 1.0e-12 77.4 41 87.8
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 2.3e-12 76.3 153 41.8
BcaC02g09031 Brassica carinata HOM05D008814 ORTHO05D010812 2.3e-12 76.3 58 63.8
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 3.9e-12 75.5 39 84.6
Nn1g10191 Nelumbo nucifera HOM05D008814 ORTHO05D010812 4.7e-10 68.6 55 61.8
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 1.1e-09 67.4 150 37.3
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 1.8e-09 66.6 34 88.2
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 3.4e-08 62.4 31 96.8
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 4.9e-07 58.5 44 65.9
Nitab4.5_0000059g0490 Nicotiana tabacum HOM05D008814 ORTHO05D010812 6.4e-07 58.2 53 52.8
SHI29636 Sapria himalayana HOM05D008814 ORTHO05D010812 4.2e-06 55.5 33 78.8


User provided reference genes

Program Settings