Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1101.4 Capsicum annuum HOM05D000027 ORTHO05D011615 7.1e-81 303.9 156 100.0
Nitab4.5_0000880g0130 Nicotiana tabacum HOM05D000027 ORTHO05D000500 1.5e-22 110.2 71 76.1
Nitab4.5_0002405g0140 Nicotiana tabacum HOM05D000027 ORTHO05D011615 9.7e-22 107.5 74 73.0
Peaxi162Scf00265g00104 Petunia axillaris HOM05D000027 ORTHO05D000500 9.1e-20 100.9 71 70.4
Cc02_g30770 Coffea canephora HOM05D000027 ORTHO05D000500 7.7e-11 71.2 71 49.3
ECA247G0192 Erigeron canadensis HOM05D000027 ORTHO05D000500 5.0e-10 68.6 73 47.9
Cc01_g13570 Coffea canephora HOM05D000027 ORTHO05D000500 6.5e-10 68.2 71 52.1
Hma1.2p1_0543F.1_g175380 Hydrangea macrophylla HOM05D000027 ORTHO05D000500 6.5e-10 68.2 71 43.7
Manes.02G125100 Manihot esculenta HOM05D000027 ORTHO05D000500 1.1e-09 67.4 71 45.1
Lj2A1071T66 Lonicera japonica HOM05D000027 ORTHO05D000500 1.9e-09 66.6 71 50.7
Lsat_1_v5_gn_9_25020 Lactuca sativa HOM05D000027 ORTHO05D000500 3.2e-09 65.9 72 47.2
Manes.02G124900 Manihot esculenta HOM05D000027 ORTHO05D000500 3.2e-09 65.9 71 42.3
Oeu045621.1 Olea europaea HOM05D000027 ORTHO05D000500 3.2e-09 65.9 71 52.1
MELO3C020591.2 Cucumis melo HOM05D000027 ORTHO05D000500 7.2e-09 64.7 74 41.9
Lj2A1043T32 Lonicera japonica HOM05D000027 ORTHO05D000500 7.2e-09 64.7 71 49.3
GSVIVG01016427001 Vitis vinifera HOM05D000027 ORTHO05D000500 9.4e-09 64.3 74 45.9
Ciclev10028405m.g Citrus clementina HOM05D000027 ORTHO05D000500 1.2e-08 63.9 71 42.3
HanXRQChr02g0055951 Helianthus annuus HOM05D000027 ORTHO05D000500 1.2e-08 63.9 73 47.9
Solyc06g076550.4 Solanum lycopersicum HOM05D000027 ORTHO05D000500 1.2e-08 63.9 73 43.8
Sopen06g032940 Solanum pennellii HOM05D000027 ORTHO05D000500 1.2e-08 63.9 73 43.8
Oeu038985.1 Olea europaea HOM05D000027 ORTHO05D000500 1.6e-08 63.5 67 47.8
Sopen10g034720 Solanum pennellii HOM05D000027 ORTHO05D000500 1.6e-08 63.5 74 41.9
MSTRG.247 Avicennia marina HOM05D000027 ORTHO05D000500 2.1e-08 63.2 69 46.4
Ciclev10028419m.g Citrus clementina HOM05D000027 ORTHO05D000500 2.1e-08 63.2 77 37.7
Manes.01G100300 Manihot esculenta HOM05D000027 ORTHO05D000500 2.1e-08 63.2 71 45.1
PGSC0003DMG400011031 Solanum tuberosum HOM05D000027 ORTHO05D000500 2.1e-08 63.2 74 43.2
Thhalv10002974m.g Eutrema salsugineum HOM05D000027 ORTHO05D000500 2.7e-08 62.8 75 42.7
Sopen10g034350 Solanum pennellii HOM05D000027 ORTHO05D000500 2.7e-08 62.8 74 43.2
Haze_24221 Corylus avellana HOM05D000027 ORTHO05D000500 3.6e-08 62.4 71 43.7
CsaV3_1G034660 Cucumis sativus L. HOM05D000027 ORTHO05D000500 3.6e-08 62.4 74 40.5
CsaV3_1G035780 Cucumis sativus L. HOM05D000027 ORTHO05D000500 3.6e-08 62.4 74 40.5
DCAR_005920 Daucus carota HOM05D000027 ORTHO05D000500 3.6e-08 62.4 73 42.5
Lj2C1072T5 Lonicera japonica HOM05D000027 ORTHO05D000500 3.6e-08 62.4 71 43.7
Nitab4.5_0010790g0010 Nicotiana tabacum HOM05D000027 ORTHO05D000500 3.6e-08 62.4 74 44.6
Oeu053869.2 Olea europaea HOM05D000027 ORTHO05D000500 3.6e-08 62.4 71 49.3
Peaxi162Scf00009g01533 Petunia axillaris HOM05D000027 ORTHO05D000500 3.6e-08 62.4 74 44.6
Peaxi162Scf00009g01534 Petunia axillaris HOM05D000027 ORTHO05D000500 3.6e-08 62.4 74 44.6
Peaxi162Scf03517g00004 Petunia axillaris HOM05D000027 ORTHO05D000500 3.6e-08 62.4 74 44.6
Sed0004745 Sechium edule HOM05D000027 ORTHO05D000500 3.6e-08 62.4 73 43.8
AL5G25610 Arabidopsis lyrata HOM05D000027 ORTHO05D000500 4.7e-08 62.0 75 41.3
Haze_24212 Corylus avellana HOM05D000027 ORTHO05D000500 4.7e-08 62.0 71 39.4
DCAR_005922 Daucus carota HOM05D000027 ORTHO05D000500 6.1e-08 61.6 71 45.1
Nitab4.5_0000770g0060 Nicotiana tabacum HOM05D000027 ORTHO05D000500 6.1e-08 61.6 74 43.2
Ciclev10028422m.g Citrus clementina HOM05D000027 ORTHO05D000500 8.0e-08 61.2 71 45.1
Haze_24220 Corylus avellana HOM05D000027 ORTHO05D000500 8.0e-08 61.2 71 42.3
QL04p049342 Quercus lobata HOM05D000027 ORTHO05D000500 8.0e-08 61.2 71 46.5
Solyc10g084890.3 Solanum lycopersicum HOM05D000027 ORTHO05D000500 8.0e-08 61.2 74 41.9
AT3G46650 Arabidopsis thaliana HOM05D000027 ORTHO05D000500 1.0e-07 60.8 74 43.2
Cc11_g03130 Coffea canephora HOM05D000027 ORTHO05D000500 1.0e-07 60.8 78 44.9
Dinv34445 Davidia involucrata HOM05D000027 ORTHO05D000500 1.0e-07 60.8 71 39.4
Eucgr.J01973 Eucalyptus grandis HOM05D000027 ORTHO05D000500 1.0e-07 60.8 75 44.0
PGSC0003DMG400011030 Solanum tuberosum HOM05D000027 ORTHO05D000500 1.0e-07 60.8 74 41.9
AT3G46660 Arabidopsis thaliana HOM05D000027 ORTHO05D000500 1.4e-07 60.5 75 38.7
Cpa.g.c40501 Carica papaya HOM05D000027 ORTHO05D000500 1.4e-07 60.5 71 43.7
Eucgr.B02291 Eucalyptus grandis HOM05D000027 ORTHO05D000500 1.4e-07 60.5 75 45.3
Hma1.2p1_0026F.1_g016710 Hydrangea macrophylla HOM05D000027 ORTHO05D000500 1.4e-07 60.5 69 39.1
PGR119G1145 Punica granatum HOM05D000027 ORTHO05D000500 1.4e-07 60.5 71 42.3
Sopen03g027430 Solanum pennellii HOM05D000027 ORTHO05D000500 1.4e-07 60.5 71 40.8
PGSC0003DMG400011029 Solanum tuberosum HOM05D000027 ORTHO05D000500 1.4e-07 60.5 74 40.5
ClCG03G001120 Citrullus lanatus HOM05D000027 ORTHO05D000500 1.8e-07 60.1 71 43.7
Peaxi162Scf00611g00218 Petunia axillaris HOM05D000027 ORTHO05D000500 1.8e-07 60.1 71 43.7
PGSC0003DMG400011074 Solanum tuberosum HOM05D000027 ORTHO05D000500 1.8e-07 60.1 74 41.9
PGSC0003DMG400021697 Solanum tuberosum HOM05D000027 ORTHO05D000500 1.8e-07 60.1 71 40.8
Actinidia23909 Actinidia chinensis HOM05D000027 ORTHO05D000500 2.3e-07 59.7 71 43.7
MSTRG.246 Avicennia marina HOM05D000027 ORTHO05D000500 2.3e-07 59.7 75 40.0
Eucgr.J01968 Eucalyptus grandis HOM05D000027 ORTHO05D000500 2.3e-07 59.7 71 43.7
Manes.01G167100 Manihot esculenta HOM05D000027 ORTHO05D000500 2.3e-07 59.7 71 39.4
Nn2g13538 Nelumbo nucifera HOM05D000027 ORTHO05D000500 2.3e-07 59.7 74 40.5
Solyc10g085280.1 Solanum lycopersicum HOM05D000027 ORTHO05D000500 2.3e-07 59.7 74 40.5
PGSC0003DMG400011027 Solanum tuberosum HOM05D000027 ORTHO05D000500 2.3e-07 59.7 74 40.5
PGSC0003DMG400030338 Solanum tuberosum HOM05D000027 ORTHO05D000500 2.3e-07 59.7 73 39.7
AT3G46670 Arabidopsis thaliana HOM05D000027 ORTHO05D000500 3.0e-07 59.3 75 40.0
Cc11_g03100 Coffea canephora HOM05D000027 ORTHO05D000500 3.0e-07 59.3 74 45.9
Lj2A1071T67 Lonicera japonica HOM05D000027 ORTHO05D000500 3.0e-07 59.3 71 42.3
Peaxi162Scf00284g00035 Petunia axillaris HOM05D000027 ORTHO05D000500 3.0e-07 59.3 74 40.5
Potri.009G039100 Populus trichocarpa HOM05D002702 ORTHO05D003416 3.0e-07 59.3 68 44.1
QL01p028506 Quercus lobata HOM05D000027 ORTHO05D000500 3.0e-07 59.3 71 38.0
Sopen10g034730 Solanum pennellii HOM05D000027 ORTHO05D000500 3.0e-07 59.3 74 40.5
A06p20840 Brassica napus HOM05D000027 ORTHO05D000500 4.0e-07 58.9 75 40.0
C03p70850 Brassica napus HOM05D000027 ORTHO05D000500 4.0e-07 58.9 75 40.0
BolC3t19355H Brassica oleracea HOM05D000027 ORTHO05D000500 4.0e-07 58.9 75 40.0
Haze_10780 Corylus avellana HOM05D000027 ORTHO05D000500 4.0e-07 58.9 71 38.0
Potri.001G245900 Populus trichocarpa HOM05D000027 ORTHO05D000500 4.0e-07 58.9 71 40.8
PGR102G3188 Punica granatum HOM05D000027 ORTHO05D000500 4.0e-07 58.9 72 40.3
Sp5g15030 Schrenkiella parvula HOM05D000027 ORTHO05D000500 4.0e-07 58.9 75 38.7
THA.LOC104819129 Tarenaya hassleriana HOM05D000027 ORTHO05D000500 4.0e-07 58.9 75 37.3
Cc03_g09630 Coffea canephora HOM05D000027 ORTHO05D000500 5.2e-07 58.5 71 38.0
Cc11_g03140 Coffea canephora HOM05D000027 ORTHO05D000500 5.2e-07 58.5 71 46.5
RcHm_v2.0_Chr1g0368971 Rosa chinensis HOM05D000027 ORTHO05D000500 5.2e-07 58.5 69 44.9
Actinidia34436 Actinidia chinensis HOM05D000027 ORTHO05D000500 6.7e-07 58.2 75 40.0
BcaB02g10712 Brassica carinata HOM05D000027 ORTHO05D000500 6.7e-07 58.2 75 40.0
CARHR155110 Cardamine hirsuta HOM05D000027 ORTHO05D000500 6.7e-07 58.2 74 37.8
Haze_17158 Corylus avellana HOM05D000027 ORTHO05D000500 6.7e-07 58.2 70 40.0
HanXRQChr03g0084541 Helianthus annuus HOM05D000027 ORTHO05D000500 6.7e-07 58.2 71 39.4
QL01p028500 Quercus lobata HOM05D000027 ORTHO05D000500 6.7e-07 58.2 71 43.7
Solyc10g085240.1 Solanum lycopersicum HOM05D000027 ORTHO05D000500 6.7e-07 58.2 74 40.5
Aa31LG1G11920 Aethionema arabicum HOM05D000027 ORTHO05D000500 8.8e-07 57.8 74 40.5
BcaB01g00997 Brassica carinata HOM05D000027 ORTHO05D000500 8.8e-07 57.8 71 39.4
BcaB02g10713 Brassica carinata HOM05D000027 ORTHO05D000500 8.8e-07 57.8 75 40.0
CiPaw.13G086700 Carya illinoinensis HOM05D000027 ORTHO05D000500 8.8e-07 57.8 71 40.8
Eucgr.J01962 Eucalyptus grandis HOM05D000027 ORTHO05D000500 8.8e-07 57.8 71 40.8
HanXRQChr03g0084581 Helianthus annuus HOM05D000027 ORTHO05D000500 8.8e-07 57.8 71 38.0
Oeu035131.1 Olea europaea HOM05D000027 ORTHO05D000500 8.8e-07 57.8 75 40.0
BolC1t03258H Brassica oleracea HOM05D000027 ORTHO05D000500 1.2e-06 57.4 70 38.6
Ciclev10028217m.g Citrus clementina HOM05D000027 ORTHO05D000500 1.2e-06 57.4 69 42.0
Ciclev10028437m.g Citrus clementina HOM05D000027 ORTHO05D000500 1.2e-06 57.4 69 43.5
Sabra09G0027800 Salix brachista HOM05D000027 ORTHO05D000500 1.2e-06 57.4 68 44.1
MSTRG.9029 Avicennia marina HOM05D000027 ORTHO05D000500 1.5e-06 57.0 74 44.6
Cpa.g.sc81.42 Carica papaya HOM05D000027 ORTHO05D000500 1.5e-06 57.0 71 42.3
Cc11_g03080 Coffea canephora HOM05D000027 ORTHO05D000500 1.5e-06 57.0 74 45.9
Duzib170G0193 Durio zibethinus HOM05D000027 ORTHO05D000500 1.5e-06 57.0 69 37.7
HanXRQChr08g0237551 Helianthus annuus HOM05D000027 ORTHO05D000500 1.5e-06 57.0 71 42.3
Solyc03g078780.3 Solanum lycopersicum HOM05D000027 ORTHO05D000500 1.5e-06 57.0 71 39.4
ECA248G0808 Erigeron canadensis HOM05D000027 ORTHO05D000500 2.0e-06 56.6 73 35.6
HanXRQChr03g0084551 Helianthus annuus HOM05D000027 ORTHO05D000500 2.0e-06 56.6 71 38.0
MD11G1090500 Malus domestica HOM05D000027 ORTHO05D000500 2.0e-06 56.6 71 40.8
Nn7g36799 Nelumbo nucifera HOM05D000027 ORTHO05D000500 2.0e-06 56.6 71 39.4
Solyc10g085230.2 Solanum lycopersicum HOM05D000027 ORTHO05D000500 2.0e-06 56.6 74 40.5
Thecc.09G311000 Theobroma cacao HOM05D000027 ORTHO05D000500 2.0e-06 56.6 71 40.8
A01p26140 Brassica napus HOM05D000027 ORTHO05D000500 2.6e-06 56.2 70 38.6
BraA01t02532Z Brassica rapa HOM05D000027 ORTHO05D000500 2.6e-06 56.2 70 38.6
BraA06t25161Z Brassica rapa HOM05D000027 ORTHO05D000500 2.6e-06 56.2 75 38.7
Carub.0005s1295 Capsella rubella HOM05D000027 ORTHO05D000500 2.6e-06 56.2 75 37.3
Cpa.g.sc81.31 Carica papaya HOM05D000027 ORTHO05D000500 2.6e-06 56.2 71 39.4
Cpa.g.sc81.46 Carica papaya HOM05D000027 ORTHO05D000500 2.6e-06 56.2 71 40.8
Ciclev10001065m.g Citrus clementina HOM05D000027 ORTHO05D000500 2.6e-06 56.2 71 39.4
Cc03_g09610 Coffea canephora HOM05D000027 ORTHO05D000500 2.6e-06 56.2 71 39.4
Cc11_g03020 Coffea canephora HOM05D000027 ORTHO05D000500 2.6e-06 56.2 74 43.2
Eucgr.J01971 Eucalyptus grandis HOM05D000027 ORTHO05D000500 2.6e-06 56.2 71 39.4
Hma1.2p1_0026F.1_g016680 Hydrangea macrophylla HOM05D000027 ORTHO05D000500 2.6e-06 56.2 68 39.7
QL01p028491 Quercus lobata HOM05D000027 ORTHO05D000500 2.6e-06 56.2 71 39.4
GSVIVG01033638001 Vitis vinifera HOM05D000027 ORTHO05D000500 2.6e-06 56.2 82 35.4
Aa31LG4G15660 Aethionema arabicum HOM05D000027 ORTHO05D000500 3.3e-06 55.8 75 36.0
BcaC09g49761 Brassica carinata HOM05D000027 ORTHO05D000500 3.3e-06 55.8 70 37.1
C01p33220 Brassica napus HOM05D000027 ORTHO05D000500 3.3e-06 55.8 70 37.1
Ciclev10028300m.g Citrus clementina HOM05D000027 ORTHO05D000500 3.3e-06 55.8 69 40.6
Duzib150G1347 Durio zibethinus HOM05D000027 ORTHO05D000500 3.3e-06 55.8 71 38.0
ECA238G0215 Erigeron canadensis HOM05D000415 ORTHO05D001916 3.3e-06 55.8 67 41.8
Lsat_1_v5_gn_2_119780 Lactuca sativa HOM05D000027 ORTHO05D000500 3.3e-06 55.8 75 37.3
Sed0010092 Sechium edule HOM05D000027 ORTHO05D000500 3.3e-06 55.8 71 40.8
Actinidia02378 Actinidia chinensis HOM05D000027 ORTHO05D000500 4.4e-06 55.5 72 34.7
CSS0042294 Camellia sinensis var. sinensis HOM05D000027 ORTHO05D000500 4.4e-06 55.5 67 43.3
Eucgr.B02292 Eucalyptus grandis HOM05D000027 ORTHO05D000500 4.4e-06 55.5 71 43.7
RcHm_v2.0_Chr5g0067091 Rosa chinensis HOM05D000027 ORTHO05D000500 4.4e-06 55.5 71 40.8
Ciclev10030803m.g Citrus clementina HOM05D000027 ORTHO05D000500 5.7e-06 55.1 69 40.6
HanXRQChr11g0337971 Helianthus annuus HOM05D000027 ORTHO05D000500 5.7e-06 55.1 73 37.0
Lsat_1_v5_gn_2_116781 Lactuca sativa HOM05D000027 ORTHO05D000500 5.7e-06 55.1 71 35.2
MD03G1082400 Malus domestica HOM05D000027 ORTHO05D000500 5.7e-06 55.1 75 40.0
MD03G1245400 Malus domestica HOM05D000027 ORTHO05D000500 5.7e-06 55.1 71 38.0
Solyc03g078810.4 Solanum lycopersicum HOM05D000027 ORTHO05D000500 5.7e-06 55.1 71 36.6
AT5G38040 Arabidopsis thaliana HOM05D000027 ORTHO05D000500 7.5e-06 54.7 78 39.7
Carub.0005s1293 Capsella rubella HOM05D000027 ORTHO05D000500 7.5e-06 54.7 75 34.7
CARHR155160 Cardamine hirsuta HOM05D000027 ORTHO05D000500 7.5e-06 54.7 75 36.0
Lsat_1_v5_gn_2_116801 Lactuca sativa HOM05D000027 ORTHO05D000500 7.5e-06 54.7 71 33.8
Lj1A947G90 Lonicera japonica HOM05D000027 ORTHO05D000500 7.5e-06 54.7 71 38.0
Lj1P945G10 Lonicera japonica HOM05D000027 ORTHO05D011615 7.5e-06 54.7 71 38.0
Peaxi162Scf00306g00057 Petunia axillaris HOM05D000027 ORTHO05D000500 7.5e-06 54.7 74 37.8
Sp7g04060 Schrenkiella parvula HOM05D000027 ORTHO05D000500 7.5e-06 54.7 67 40.3
AL7G52904 Arabidopsis lyrata HOM05D000027 ORTHO05D000500 9.7e-06 54.3 67 40.3
arahy.Tifrunner.gnm1.ann1.S8G8YG Arachis hypogaea HOM05D000027 ORTHO05D000500 9.7e-06 54.3 67 40.3
CARHR214710 Cardamine hirsuta HOM05D000027 ORTHO05D000500 9.7e-06 54.3 74 35.1
Cpa.g.sc81.29 Carica papaya HOM05D000027 ORTHO05D000500 9.7e-06 54.3 71 42.3
CiPaw.01G293900 Carya illinoinensis HOM05D000027 ORTHO05D000500 9.7e-06 54.3 67 38.8
Ciclev10020064m.g Citrus clementina HOM05D000027 ORTHO05D000500 9.7e-06 54.3 69 40.6
Cc01_g06490 Coffea canephora HOM05D000027 ORTHO05D000500 9.7e-06 54.3 71 43.7
Duzib170G0011 Durio zibethinus HOM05D000027 ORTHO05D000500 9.7e-06 54.3 71 38.0
Thhalv10002769m.g Eutrema salsugineum HOM05D000027 ORTHO05D000500 9.7e-06 54.3 75 34.7
FvH4_3g37270 Fragaria vesca HOM05D000027 ORTHO05D000500 9.7e-06 54.3 71 35.2
MBI14_g16891_MAGBIO Magnolia biondii HOM05D000027 ORTHO05D000500 9.7e-06 54.3 71 38.0
MD03G1082100 Malus domestica HOM05D000027 ORTHO05D000500 9.7e-06 54.3 75 40.0
MD07G1209100 Malus domestica HOM05D000027 ORTHO05D011615 9.7e-06 54.3 69 40.6
MD07G1209300 Malus domestica HOM05D000027 ORTHO05D011615 9.7e-06 54.3 69 39.1
Hund13817 Selenicereus undatus HOM05D000027 ORTHO05D000500 9.7e-06 54.3 71 36.6
TWI79G1242 Tripterygium wilfordii HOM05D000027 ORTHO05D000500 9.7e-06 54.3 71 38.0


User provided reference genes

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