Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 1.8e-136 489.2 240 100.0
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 2.5e-125 452.2 240 92.9
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 5.5e-125 451.1 240 92.5
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 2.0e-122 442.6 236 90.7
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.3e-118 429.9 236 88.1
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.5e-114 416.4 241 85.9
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 7.0e-104 380.9 196 92.9
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 3.8e-102 375.2 243 75.7
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.8e-99 366.3 240 74.2
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 4.0e-99 365.2 240 75.8
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.4e-98 361.7 239 74.1
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 1.3e-97 360.1 240 73.8
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 1.3e-97 360.1 240 74.6
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 6.3e-97 357.8 244 73.4
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 2.4e-96 355.9 239 72.4
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 3.1e-96 355.5 240 74.2
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.1e-96 355.1 240 74.2
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.2e-95 353.6 240 72.5
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.6e-95 353.2 243 72.4
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 2.7e-95 352.4 240 72.9
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 3.5e-95 352.1 240 72.5
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 4.5e-95 351.7 239 73.6
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 4.5e-95 351.7 241 74.3
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 4.5e-95 351.7 240 72.9
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 5.9e-95 351.3 240 71.7
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.9e-95 351.3 240 73.3
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 5.9e-95 351.3 240 72.1
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 1.0e-94 350.5 240 72.9
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 1.7e-94 349.7 241 72.6
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 2.9e-94 349.0 240 73.3
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 3.8e-94 348.6 240 71.2
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.0e-94 348.2 244 72.5
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 6.6e-94 347.8 236 72.5
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 8.6e-94 347.4 240 74.2
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 1.5e-93 346.7 240 71.7
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 1.9e-93 346.3 238 69.7
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.5e-93 345.9 244 72.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.5e-93 345.9 237 71.7
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 3.3e-93 345.5 241 71.0
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 9.5e-93 344.0 244 70.1
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 9.5e-93 344.0 240 72.1
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.6e-92 343.2 242 70.7
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.6e-92 343.2 243 70.0
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 2.1e-92 342.8 241 71.8
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 2.8e-92 342.4 240 70.4
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.7e-92 341.7 236 70.8
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 6.1e-92 341.3 240 70.0
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 8.0e-92 340.9 240 70.4
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 8.0e-92 340.9 220 74.1
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.0e-91 340.5 216 76.9
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 1.0e-91 340.5 237 70.0
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.0e-91 340.5 237 70.5
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 6.8e-91 337.8 239 71.1
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 6.8e-91 337.8 243 69.1
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 8.9e-91 337.4 241 71.4
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.5e-90 336.7 240 69.6
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 2.0e-90 336.3 243 70.0
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 2.6e-90 335.9 243 68.7
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 2.6e-90 335.9 243 70.0
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.4e-90 335.5 236 69.9
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 5.7e-90 334.7 220 73.2
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 9.8e-90 334.0 310 58.7
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 1.3e-89 333.6 210 76.7
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.3e-89 333.6 244 68.9
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 2.9e-89 332.4 216 74.1
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 3.7e-89 332.0 251 66.9
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 8.3e-89 330.9 216 74.5
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.8e-88 329.7 229 71.6
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 5.4e-88 328.2 219 72.1
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 5.4e-88 328.2 241 66.0
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 5.9e-87 324.7 196 80.1
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 1.0e-86 323.9 238 67.2
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 1.7e-86 323.2 227 68.7
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 1.7e-86 323.2 234 68.8
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 1.7e-86 323.2 229 71.6
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 3.9e-86 322.0 238 66.8
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 2.5e-85 319.3 238 66.4
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 7.3e-85 317.8 232 69.0
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 2.8e-84 315.8 219 69.9
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 4.7e-84 315.1 236 64.8
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 8.0e-84 314.3 194 77.8
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.0e-83 313.9 240 67.1
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.8e-83 313.2 217 69.6
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 3.1e-83 312.4 196 76.5
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 6.8e-83 311.2 220 69.5
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 2.0e-82 309.7 240 64.6
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 3.4e-82 308.9 237 63.7
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 4.4e-82 308.5 221 67.9
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 7.5e-82 307.8 235 65.5
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 7.5e-82 307.8 235 65.5
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 1.7e-81 306.6 219 68.9
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 6.4e-81 304.7 223 66.8
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 6.4e-81 304.7 223 66.8
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 8.3e-81 304.3 219 68.9
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.2e-79 300.4 207 69.6
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 2.7e-79 299.3 224 62.5
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.0e-78 297.4 223 65.9
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 1.7e-78 296.6 243 63.4
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 6.2e-76 288.1 205 68.8
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 3.1e-75 285.8 216 64.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 9.8e-74 280.8 213 61.0
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 4.9e-73 278.5 200 68.5
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 6.4e-73 278.1 242 58.3
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 7.1e-72 274.6 187 70.6
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 4.9e-65 251.9 192 64.1
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 4.9e-65 251.9 221 57.5
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 3.5e-63 245.7 221 54.3
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.6e-63 245.4 211 60.2
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 2.3e-62 243.0 269 52.8
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 2.5e-61 239.6 202 62.9
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.4e-57 224.9 142 75.4
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 8.4e-57 224.6 183 58.5
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 4.2e-56 222.2 206 56.3
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 5.4e-56 221.9 233 50.6
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 8.7e-54 214.5 141 75.2
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.0e-50 203.4 191 52.9
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 7.6e-50 201.4 125 77.6
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 5.5e-32 142.1 185 41.6
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 6.7e-30 135.2 207 40.6
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.3e-25 120.9 112 56.2
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.3e-22 110.9 249 31.7
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 2.5e-21 106.7 164 40.2
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 4.3e-21 105.9 183 38.8
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 3.3e-13 79.7 66 56.1
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.7e-12 77.4 49 69.4
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 4.1e-11 72.8 60 55.0
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.5e-08 63.5 34 79.4
MCO03G036 Micromonas commoda HOM05D037152 ORTHO05D034124 2.3e-06 57.0 167 30.5


User provided reference genes

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