Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1094.19 Capsicum annuum HOM05D001311 ORTHO05D114933 1.6e-107 392.9 219 100.0
CAN.G1094.18 Capsicum annuum HOM05D001311 ORTHO05D001204 4.5e-25 119.0 99 57.6
Nitab4.5_0001157g0010 Nicotiana tabacum HOM05D001311 ORTHO05D001204 8.0e-22 108.2 101 55.4
Nitab4.5_0001157g0020 Nicotiana tabacum HOM05D001311 ORTHO05D001204 3.0e-21 106.3 102 53.9
Sopen09g031120 Solanum pennellii HOM05D001311 ORTHO05D001204 2.0e-20 103.6 99 53.5
PGSC0003DMG400032272 Solanum tuberosum HOM05D001311 ORTHO05D001204 2.0e-20 103.6 99 52.5
Nitab4.5_0001237g0030 Nicotiana tabacum HOM05D001311 ORTHO05D001204 6.3e-19 98.6 102 53.9
Nitab4.5_0001237g0010 Nicotiana tabacum HOM05D001311 ORTHO05D001204 3.5e-17 92.8 100 49.0
Peaxi162Scf00092g00414 Petunia axillaris HOM05D001311 ORTHO05D001204 2.8e-14 83.2 87 51.7
CAN.G1094.16 Capsicum annuum HOM05D001311 ORTHO05D001204 6.1e-14 82.0 75 53.3
Actinidia08484 Actinidia chinensis HOM05D001311 ORTHO05D001204 2.3e-13 80.1 78 48.7
Solyc09g082230.1 Solanum lycopersicum HOM05D001311 ORTHO05D001204 2.3e-13 80.1 76 50.0
Sopen09g031110 Solanum pennellii HOM05D001311 ORTHO05D001204 1.5e-12 77.4 73 50.7
CSS0028312 Camellia sinensis var. sinensis HOM05D001311 ORTHO05D001204 2.0e-12 77.0 86 47.7
PGSC0003DMG400032273 Solanum tuberosum HOM05D001311 ORTHO05D001204 2.0e-12 77.0 76 50.0
DCAR_002378 Daucus carota HOM05D001311 ORTHO05D001204 3.4e-12 76.3 84 44.0
Cpa.g.sc58.88 Carica papaya HOM05D001311 ORTHO05D001204 9.8e-12 74.7 63 47.6
DCAR_030652 Daucus carota HOM05D001311 ORTHO05D001204 1.7e-11 73.9 66 50.0
CSS0026047 Camellia sinensis var. sinensis HOM05D001311 ORTHO05D001204 2.2e-11 73.6 86 45.3
Hma1.2p1_0602F.1_g187470 Hydrangea macrophylla HOM05D001311 ORTHO05D001204 2.2e-11 73.6 67 46.3
TWI53G0321 Tripterygium wilfordii HOM05D001311 ORTHO05D001204 2.2e-11 73.6 58 55.2
COL.COLO4_21507 Corchorus olitorius HOM05D001311 ORTHO05D001204 2.8e-11 73.2 66 42.4
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 2.8e-11 73.2 60 51.7
TAR636G3534 Trochodendron aralioides HOM05D001311 ORTHO05D001204 2.8e-11 73.2 64 46.9
Potri.010G085600 Populus trichocarpa HOM05D001311 ORTHO05D001204 4.9e-11 72.4 72 40.3
QL06p001953 Quercus lobata HOM05D001311 ORTHO05D001204 4.9e-11 72.4 66 45.5
Manes.03G176700 Manihot esculenta HOM05D001311 ORTHO05D001204 8.3e-11 71.6 72 41.7
vmacro15353 Vaccinium macrocarpon HOM05D001311 ORTHO05D001204 8.3e-11 71.6 78 43.6
Manes.15G030300 Manihot esculenta HOM05D001311 ORTHO05D001204 1.1e-10 71.2 72 41.7
Sabra10G0058000 Salix brachista HOM05D001311 ORTHO05D001204 1.1e-10 71.2 72 38.9
CAN.G630.59 Capsicum annuum HOM05D001311 ORTHO05D001204 1.4e-10 70.9 68 42.6
Gohir.D02G040100 Gossypium hirsutum HOM05D001311 ORTHO05D001204 1.4e-10 70.9 62 45.2
Gorai.005G044500 Gossypium raimondii HOM05D001311 ORTHO05D001204 1.4e-10 70.9 62 45.2
Atru.chr4.2442 Acer truncatum HOM05D001311 ORTHO05D001204 1.8e-10 70.5 99 36.4
Atru.ctg752_3.56 Acer truncatum HOM05D001311 ORTHO05D001204 1.8e-10 70.5 99 36.4
Duzib151G0208 Durio zibethinus HOM05D001311 ORTHO05D001204 1.8e-10 70.5 71 42.3
PSO761G0572 Papaver somniferum HOM05D001311 ORTHO05D001204 1.8e-10 70.5 79 41.8
Solyc09g082250.3 Solanum lycopersicum HOM05D001311 ORTHO05D001204 2.4e-10 70.1 71 49.3
Thecc.04G234500 Theobroma cacao HOM05D001311 ORTHO05D001204 2.4e-10 70.1 80 37.5
COL.COLO4_21510 Corchorus olitorius HOM05D001311 ORTHO05D001204 3.1e-10 69.7 66 40.9
Nitab4.5_0006783g0010 Nicotiana tabacum HOM05D001311 ORTHO05D001204 3.1e-10 69.7 64 48.4
QL06p001965 Quercus lobata HOM05D001311 ORTHO05D001204 3.1e-10 69.7 63 44.4
Atru.chr4.2441 Acer truncatum HOM05D001311 ORTHO05D001204 4.1e-10 69.3 74 40.5
FAN12G1141 Fragaria x ananassa HOM05D001311 ORTHO05D001204 4.1e-10 69.3 68 44.1
FAN12G1914 Fragaria x ananassa HOM05D001311 ORTHO05D001204 4.1e-10 69.3 68 44.1
PSO210G2080 Papaver somniferum HOM05D001311 ORTHO05D001204 4.1e-10 69.3 63 44.4
TAR636G0806 Trochodendron aralioides HOM05D001311 ORTHO05D001204 4.1e-10 69.3 73 46.6
Actinidia36951 Actinidia chinensis HOM05D001311 ORTHO05D001204 5.4e-10 68.9 77 44.2
Aqoxy2G03418 Aquilegia oxysepala HOM05D001311 ORTHO05D001204 5.4e-10 68.9 58 48.3
DCAR_002377 Daucus carota HOM05D001311 ORTHO05D001204 5.4e-10 68.9 63 47.6
Rhsim02G0026400 Rhododendron simsii HOM05D001311 ORTHO05D001204 7.0e-10 68.6 78 39.7
RcHm_v2.0_Chr4g0415661 Rosa chinensis HOM05D001311 ORTHO05D001204 7.0e-10 68.6 71 40.8
RcHm_v2.0_Chr4g0415691 Rosa chinensis HOM05D001311 ORTHO05D001204 7.0e-10 68.6 71 40.8
TWI34G1927 Tripterygium wilfordii HOM05D001311 ORTHO05D001204 7.0e-10 68.6 61 47.5
Actinidia23524 Actinidia chinensis HOM05D001311 ORTHO05D001204 9.2e-10 68.2 61 47.5
SGA_v2.0_scaffold191G40509 Striga asiatica HOM05D001311 ORTHO05D001204 9.2e-10 68.2 62 41.9
Rhsim04G0201100 Rhododendron simsii HOM05D001311 ORTHO05D001204 1.2e-09 67.8 60 48.3
RcHm_v2.0_Chr4g0415651 Rosa chinensis HOM05D001311 ORTHO05D001204 1.2e-09 67.8 65 44.6
Gohir.D02G040000 Gossypium hirsutum HOM05D001311 ORTHO05D001204 1.6e-09 67.4 62 43.5
Gorai.005G044300 Gossypium raimondii HOM05D001311 ORTHO05D001204 1.6e-09 67.4 62 43.5
TAR636G0293 Trochodendron aralioides HOM05D001311 ORTHO05D001204 1.6e-09 67.4 116 31.0
COL.COLO4_21508 Corchorus olitorius HOM05D001311 ORTHO05D001204 2.0e-09 67.0 66 39.4
Peaxi162Scf00131g00015 Petunia axillaris HOM05D002528 ORTHO05D001204 2.0e-09 67.0 67 44.8
GSVIVG01018003001 Vitis vinifera HOM05D001311 ORTHO05D001204 2.0e-09 67.0 68 41.2
Eucgr.B01057 Eucalyptus grandis HOM05D001311 ORTHO05D001204 2.7e-09 66.6 60 41.7
Gohir.A02G033500 Gossypium hirsutum HOM05D001311 ORTHO05D001204 2.7e-09 66.6 62 43.5
FvH4_4g26600 Fragaria vesca HOM05D001311 ORTHO05D001204 3.5e-09 66.2 68 42.6
FAN07G1835 Fragaria x ananassa HOM05D001311 ORTHO05D001204 3.5e-09 66.2 61 45.9
Nitab4.5_0001834g0040 Nicotiana tabacum HOM05D001311 ORTHO05D001204 3.5e-09 66.2 78 42.3
Ciclev10005971m.g Citrus clementina HOM05D001311 ORTHO05D001204 4.5e-09 65.9 86 40.7
Nn6g34102 Nelumbo nucifera HOM05D001311 ORTHO05D001204 5.9e-09 65.5 69 46.4
CSS0004976 Camellia sinensis var. sinensis HOM05D001311 ORTHO05D001204 7.8e-09 65.1 64 42.2
Dinv14008 Davidia involucrata HOM05D001311 ORTHO05D001204 7.8e-09 65.1 78 42.3
Eucgr.H03446 Eucalyptus grandis HOM05D001311 ORTHO05D001204 7.8e-09 65.1 60 46.7
Rhsim02G0026600 Rhododendron simsii HOM05D001311 ORTHO05D001204 7.8e-09 65.1 78 39.7
MSTRG.9972 Avicennia marina HOM05D001311 ORTHO05D001204 1.0e-08 64.7 75 45.3
CSS0008296 Camellia sinensis var. sinensis HOM05D001311 ORTHO05D001204 1.0e-08 64.7 64 42.2
CSS0018712 Camellia sinensis var. sinensis HOM05D001311 ORTHO05D001204 1.0e-08 64.7 64 42.2
CiPaw.01G168100 Carya illinoinensis HOM05D001311 ORTHO05D001204 1.0e-08 64.7 64 40.6
Ciclev10005998m.g Citrus clementina HOM05D001311 ORTHO05D001204 1.0e-08 64.7 72 37.5
Ciclev10005999m.g Citrus clementina HOM05D001311 ORTHO05D001204 1.0e-08 64.7 64 43.8
Dinv44549 Davidia involucrata HOM05D001311 ORTHO05D001204 1.0e-08 64.7 64 48.4
FAN09G2018 Fragaria x ananassa HOM05D001311 ORTHO05D001204 1.0e-08 64.7 71 38.0
MD16G1196500 Malus domestica HOM05D001311 ORTHO05D001204 1.0e-08 64.7 62 43.5
PGSC0003DMG400032271 Solanum tuberosum HOM05D001311 ORTHO05D001204 1.0e-08 64.7 48 56.2
CANSAT78G1189 Cannabis sativa HOM05D001311 ORTHO05D001204 1.3e-08 64.3 65 46.2
Eucgr.H03444 Eucalyptus grandis HOM05D001311 ORTHO05D001204 1.3e-08 64.3 62 45.2
Eucgr.H03445 Eucalyptus grandis HOM05D001311 ORTHO05D001204 1.3e-08 64.3 62 45.2
Nitab4.5_0012606g0010 Nicotiana tabacum HOM05D001311 ORTHO05D001204 1.3e-08 64.3 68 39.7
PSO210G3021 Papaver somniferum HOM05D001311 ORTHO05D001204 1.3e-08 64.3 68 41.2
FvH4_4g16130 Fragaria vesca HOM05D001311 ORTHO05D001204 1.7e-08 63.9 71 36.6
Nitab4.5_0000321g0130 Nicotiana tabacum HOM05D001311 ORTHO05D001204 1.7e-08 63.9 76 42.1
PSO170G3182 Papaver somniferum HOM05D001311 ORTHO05D001204 1.7e-08 63.9 68 41.2
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 1.7e-08 63.9 78 41.0
CiPaw.07G008400 Carya illinoinensis HOM05D001311 ORTHO05D001204 2.3e-08 63.5 63 41.3
COL.COLO4_21500 Corchorus olitorius HOM05D001311 ORTHO05D001204 2.3e-08 63.5 68 42.6
Sopen06g019250 Solanum pennellii HOM05D001311 ORTHO05D001204 2.3e-08 63.5 70 38.6
MBI05_g12087_MAGBIO Magnolia biondii HOM05D001311 ORTHO05D001204 2.9e-08 63.2 61 45.9
QL06p001948 Quercus lobata HOM05D001311 ORTHO05D001204 2.9e-08 63.2 74 44.6
RhsimUnG0028600 Rhododendron simsii HOM05D001311 ORTHO05D001204 2.9e-08 63.2 78 41.0
CANSAT78G2342 Cannabis sativa HOM05D001311 ORTHO05D001204 3.8e-08 62.8 82 40.2
THA.LOC104815883 Tarenaya hassleriana HOM05D001311 ORTHO05D001204 3.8e-08 62.8 98 32.7
Atru.chr2.659 Acer truncatum HOM05D001311 ORTHO05D001204 5.0e-08 62.4 58 46.6
CSS0022770 Camellia sinensis var. sinensis HOM05D001311 ORTHO05D001204 5.0e-08 62.4 64 40.6
MELO3C006522.2 Cucumis melo HOM05D001311 ORTHO05D001204 5.0e-08 62.4 64 40.6
Nn6g34103 Nelumbo nucifera HOM05D001311 ORTHO05D001204 5.0e-08 62.4 62 48.4
Aqoxy2G01172 Aquilegia oxysepala HOM05D001311 ORTHO05D038536 6.6e-08 62.0 63 42.9
MBI16_g26395_MAGBIO Magnolia biondii HOM05D001311 ORTHO05D001204 6.6e-08 62.0 63 42.9
CsaV3_3G013150 Cucumis sativus L. HOM05D001311 ORTHO05D001204 8.6e-08 61.6 64 39.1
Nn6g34099 Nelumbo nucifera HOM05D001311 ORTHO05D001204 8.6e-08 61.6 62 41.9
Aqoxy2G03417 Aquilegia oxysepala HOM05D001311 ORTHO05D001204 1.1e-07 61.2 70 41.4
Sopen09g031130 Solanum pennellii HOM05D001311 ORTHO05D001204 1.1e-07 61.2 49 57.1
TAR365G1051 Trochodendron aralioides HOM05D001311 ORTHO05D001204 1.5e-07 60.8 56 41.1
CiPaw.02G098800 Carya illinoinensis HOM05D001311 ORTHO05D001204 1.9e-07 60.5 58 43.1
ECA246G4164 Erigeron canadensis HOM05D001311 ORTHO05D001204 1.9e-07 60.5 62 35.5
Oeu049781.1 Olea europaea HOM05D001311 ORTHO05D001204 1.9e-07 60.5 61 42.6
Solyc06g054090.2 Solanum lycopersicum HOM05D001311 ORTHO05D001204 1.9e-07 60.5 67 40.3
CARHR125820 Cardamine hirsuta HOM05D001311 ORTHO05D001204 2.5e-07 60.1 56 41.1
COL.COLO4_21504 Corchorus olitorius HOM05D001311 ORTHO05D001204 2.5e-07 60.1 81 37.0
Haze_00879 Corylus avellana HOM05D001311 ORTHO05D001204 2.5e-07 60.1 59 40.7
Duzib151G0044 Durio zibethinus HOM05D001311 ORTHO05D001204 2.5e-07 60.1 69 42.0
QL03p000264 Quercus lobata HOM05D001311 ORTHO05D001204 2.5e-07 60.1 60 46.7
TWI09G0509 Tripterygium wilfordii HOM05D001311 ORTHO05D001204 2.5e-07 60.1 64 35.9
Aa31LG5G4980 Aethionema arabicum HOM05D001311 ORTHO05D001204 3.3e-07 59.7 56 41.1
Dinv44550 Davidia involucrata HOM05D001311 ORTHO05D001204 3.3e-07 59.7 65 41.5
Migut.G00351 Erythranthe guttata HOM05D001311 ORTHO05D001204 3.3e-07 59.7 65 41.5
MBI04_g13669_MAGBIO Magnolia biondii HOM05D001311 ORTHO05D001204 3.3e-07 59.7 74 39.2
Nn1g02362 Nelumbo nucifera HOM05D001311 ORTHO05D001204 3.3e-07 59.7 72 37.5
Prupe.1G016600 Prunus persica HOM05D001311 ORTHO05D001204 3.3e-07 59.7 56 41.1
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 3.3e-07 59.7 56 44.6
Hund19070 Selenicereus undatus HOM05D001311 ORTHO05D001204 3.3e-07 59.7 70 38.6
COL.COLO4_21506 Corchorus olitorius HOM05D001311 ORTHO05D001204 4.3e-07 59.3 68 38.2
Hma1.2p1_1572F.1_g291360 Hydrangea macrophylla HOM05D001311 ORTHO05D001204 4.3e-07 59.3 65 41.5
Sed0012209 Sechium edule HOM05D001311 ORTHO05D001204 4.3e-07 59.3 56 39.3
Sc06g0003600 Simmondsia chinensis HOM05D001311 ORTHO05D001204 4.3e-07 59.3 64 40.6
Sc06g0003610 Simmondsia chinensis HOM05D001311 ORTHO05D001204 4.3e-07 59.3 64 40.6
C04p17590 Brassica napus HOM05D001311 ORTHO05D001204 5.6e-07 58.9 72 34.7
BolC4t23306H Brassica oleracea HOM05D001311 ORTHO05D001204 5.6e-07 58.9 72 34.7
Ciclev10002694m.g Citrus clementina HOM05D001311 ORTHO05D001204 5.6e-07 58.9 57 42.1
Atru.chr4.2440 Acer truncatum HOM05D001311 ORTHO05D001204 7.3e-07 58.5 59 45.8
Duzib151G0685 Durio zibethinus HOM05D001311 ORTHO05D001204 7.3e-07 58.5 67 37.3
Nn5g27734 Nelumbo nucifera HOM05D001311 ORTHO05D001204 7.3e-07 58.5 58 46.6
PGR004G1722 Punica granatum HOM05D001311 ORTHO05D001204 7.3e-07 58.5 64 37.5
TAR627G0599 Trochodendron aralioides HOM05D001311 ORTHO05D001204 7.3e-07 58.5 57 45.6
QL06p001881 Quercus lobata HOM05D001311 ORTHO05D001204 9.5e-07 58.2 57 43.9
QL06p001940 Quercus lobata HOM05D001311 ORTHO05D001204 9.5e-07 58.2 63 42.9
Sed0017251 Sechium edule HOM05D001311 ORTHO05D001204 9.5e-07 58.2 64 37.5
COL.COLO4_21505 Corchorus olitorius HOM05D001311 ORTHO05D001204 1.2e-06 57.8 68 36.8
Glyma.01G236700 Glycine max HOM05D001311 ORTHO05D001204 1.2e-06 57.8 60 40.0
Sed0008152 Sechium edule HOM05D001311 ORTHO05D001204 1.2e-06 57.8 61 37.7
CiPaw.08G178200 Carya illinoinensis HOM05D001311 ORTHO05D001204 1.6e-06 57.4 58 46.6
ClCG03G016320 Citrullus lanatus HOM05D001311 ORTHO05D001204 1.6e-06 57.4 61 41.0
Ciclev10003433m.g Citrus clementina HOM05D001311 ORTHO05D001204 1.6e-06 57.4 62 45.2
Cc03_g04000 Coffea canephora HOM05D001311 ORTHO05D038536 1.6e-06 57.4 56 46.4
MD13G1195500 Malus domestica HOM05D001311 ORTHO05D001204 1.6e-06 57.4 63 41.3
Atru.chr2.660 Acer truncatum HOM05D001311 ORTHO05D001204 2.1e-06 57.0 58 46.6
COL.COLO4_21503 Corchorus olitorius HOM05D001311 ORTHO05D001204 2.1e-06 57.0 87 34.5
Haze_00878 Corylus avellana HOM05D001311 ORTHO05D001204 2.1e-06 57.0 58 43.1
SalBow2G1348 Salvia bowleyana HOM05D001311 ORTHO05D001204 2.1e-06 57.0 56 39.3
Sp4g14450 Schrenkiella parvula HOM05D001311 ORTHO05D001204 2.1e-06 57.0 87 33.3
Thhalv10017278m.g Eutrema salsugineum HOM05D001311 ORTHO05D001204 2.8e-06 56.6 56 41.1
Potri.008G154800 Populus trichocarpa HOM05D001311 ORTHO05D001204 2.8e-06 56.6 58 39.7
TWI53G0313 Tripterygium wilfordii HOM05D001311 ORTHO05D001204 2.8e-06 56.6 64 34.4
AT2G32030 Arabidopsis thaliana HOM05D001311 ORTHO05D001204 3.6e-06 56.2 56 41.1
A04p24690 Brassica napus HOM05D001311 ORTHO05D001204 3.6e-06 56.2 56 42.9
DCAR_017899 Daucus carota HOM05D001311 ORTHO05D001204 3.6e-06 56.2 59 40.7
FAN07G0075 Fragaria x ananassa HOM05D001311 ORTHO05D001204 3.6e-06 56.2 58 41.4
Nn6g34100 Nelumbo nucifera HOM05D001311 ORTHO05D001204 3.6e-06 56.2 58 41.4
Sp4g14430 Schrenkiella parvula HOM05D001311 ORTHO05D001204 3.6e-06 56.2 56 42.9
TWI53G0858 Tripterygium wilfordii HOM05D001311 ORTHO05D001204 3.6e-06 56.2 64 34.4
Carub.0004s1338 Capsella rubella HOM05D001311 ORTHO05D001204 4.7e-06 55.8 56 39.3
Ciclev10006418m.g Citrus clementina HOM05D001311 ORTHO05D001204 4.7e-06 55.8 58 41.4
DCAR_030648 Daucus carota HOM05D001311 ORTHO05D001204 4.7e-06 55.8 56 41.1
DCAR_030649 Daucus carota HOM05D001311 ORTHO05D001204 4.7e-06 55.8 56 41.1
MD16G1196300 Malus domestica HOM05D001311 ORTHO05D001204 6.1e-06 55.5 58 37.9
GSVIVG01018002001 Vitis vinifera HOM05D001311 ORTHO05D001204 6.1e-06 55.5 60 40.0
AL4G27400 Arabidopsis lyrata HOM05D001311 ORTHO05D001204 8.0e-06 55.1 72 33.3
AT2G32020 Arabidopsis thaliana HOM05D001311 ORTHO05D001204 8.0e-06 55.1 72 33.3
BcaB06g28580 Brassica carinata HOM05D001311 ORTHO05D001204 8.0e-06 55.1 69 33.3
BcaC02g07925 Brassica carinata HOM05D001311 ORTHO05D001204 8.0e-06 55.1 56 42.9
A05p13470 Brassica napus HOM05D001311 ORTHO05D001204 8.0e-06 55.1 75 34.7
C04p61890 Brassica napus HOM05D001311 ORTHO05D001204 8.0e-06 55.1 56 42.9
BraA05t20283Z Brassica rapa HOM05D001311 ORTHO05D001204 8.0e-06 55.1 75 34.7
CAN.G231.7 Capsicum annuum HOM05D001311 ORTHO05D001204 8.0e-06 55.1 48 47.9
Manes.03G176800 Manihot esculenta HOM05D001311 ORTHO05D001204 8.0e-06 55.1 58 39.7


User provided reference genes

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