Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1090.23 Capsicum annuum HOM05D003489 ORTHO05D004109 3.4e-39 164.5 80 100.0
CAN.G395.5 Capsicum annuum HOM05D003489 ORTHO05D004109 2.6e-23 111.7 61 90.2
CAN.G368.2 Capsicum annuum HOM05D003489 ORTHO05D004109 5.0e-22 107.5 61 86.9
CAN.G300.7 Capsicum annuum HOM05D003489 ORTHO05D004109 1.9e-21 105.5 61 86.9
Peaxi162Scf00452g00336 Petunia axillaris HOM05D003489 ORTHO05D004109 2.5e-21 105.1 60 85.0
Solyc07g066630.4 Solanum lycopersicum HOM05D003489 ORTHO05D004109 4.2e-21 104.4 60 85.0
Sopen07g034780 Solanum pennellii HOM05D003489 ORTHO05D004109 4.2e-21 104.4 60 85.0
CAN.G426.31 Capsicum annuum HOM05D003489 ORTHO05D004109 7.2e-21 103.6 61 85.2
CAN.G213.21 Capsicum annuum HOM05D003489 ORTHO05D004109 9.4e-21 103.2 61 82.0
Nitab4.5_0000029g0300 Nicotiana tabacum HOM05D003489 ORTHO05D004109 9.4e-21 103.2 60 83.3
CAN.G764.1 Capsicum annuum HOM05D003489 ORTHO05D004109 1.2e-20 102.8 62 80.6
CAN.G943.55 Capsicum annuum HOM05D003489 ORTHO05D004109 2.1e-20 102.1 60 85.0
Nitab4.5_0000029g0290 Nicotiana tabacum HOM05D003489 ORTHO05D004109 3.6e-20 101.3 60 81.7
Cc05_g16430 Coffea canephora HOM05D003489 ORTHO05D004109 1.8e-19 99.0 60 80.0
CANSAT80G0618 Cannabis sativa HOM05D003489 ORTHO05D004109 3.9e-19 97.8 60 80.0
AUR62040866 Chenopodium quinoa HOM05D003489 ORTHO05D004109 3.9e-19 97.8 57 80.7
Ciclev10005524m.g Citrus clementina HOM05D003489 ORTHO05D004109 5.1e-19 97.4 60 78.3
HanXRQChr03g0078191 Helianthus annuus HOM05D003489 ORTHO05D004109 5.1e-19 97.4 61 80.3
MBI18_g11461_MAGBIO Magnolia biondii HOM05D003489 ORTHO05D004109 5.1e-19 97.4 60 76.7
MSTRG.16098 Avicennia marina HOM05D003489 ORTHO05D004109 6.7e-19 97.1 60 76.7
Oeu043715.1 Olea europaea HOM05D003489 ORTHO05D004109 6.7e-19 97.1 60 76.7
GSVIVG01036762001 Vitis vinifera HOM05D003489 ORTHO05D004109 6.7e-19 97.1 60 76.7
Oeu019723.1 Olea europaea HOM05D003489 ORTHO05D004109 8.8e-19 96.7 60 76.7
TPR.G9418 Trifolium pratense HOM05D003489 ORTHO05D004109 8.8e-19 96.7 60 76.7
CiPaw.11G061000 Carya illinoinensis HOM05D003489 ORTHO05D004109 1.1e-18 96.3 60 76.7
Migut.H01667 Erythranthe guttata HOM05D003489 ORTHO05D004109 1.1e-18 96.3 60 76.7
FAN11G1209 Fragaria x ananassa HOM05D003489 ORTHO05D004109 1.1e-18 96.3 60 76.7
Psat4g137680 Pisum sativum HOM05D003489 ORTHO05D004109 1.1e-18 96.3 60 76.7
QL04p087224 Quercus lobata HOM05D003489 ORTHO05D004109 1.1e-18 96.3 60 76.7
Sed0005392 Sechium edule HOM05D003489 ORTHO05D004109 1.1e-18 96.3 60 75.0
Nn7g38230 Nelumbo nucifera HOM05D003489 ORTHO05D004109 1.5e-18 95.9 60 76.7
PGR031G2340 Punica granatum HOM05D003489 ORTHO05D004109 1.5e-18 95.9 60 75.0
Atru.chr10.457 Acer truncatum HOM05D003489 ORTHO05D004109 2.0e-18 95.5 61 73.8
Actinidia22416 Actinidia chinensis HOM05D003489 ORTHO05D004109 2.0e-18 95.5 60 73.3
HanXRQChr03g0078181 Helianthus annuus HOM05D003489 ORTHO05D004109 2.0e-18 95.5 61 77.0
Sc18g0003310 Simmondsia chinensis HOM05D003489 ORTHO05D004109 2.0e-18 95.5 60 78.3
vmacro09770 Vaccinium macrocarpon HOM05D003489 ORTHO05D004109 2.0e-18 95.5 60 75.0
AUR62032089 Chenopodium quinoa HOM05D003489 ORTHO05D004109 2.6e-18 95.1 60 76.7
Lj2A13T24 Lonicera japonica HOM05D003489 ORTHO05D004109 2.6e-18 95.1 59 78.0
EL10Ac2g03234 Beta vulgaris HOM05D003489 ORTHO05D004109 3.3e-18 94.7 60 76.7
Cpa.g.sc30.144 Carica papaya HOM05D003489 ORTHO05D004109 3.3e-18 94.7 60 71.7
SGA_v2.0_scaffold47G17759 Striga asiatica HOM05D003489 ORTHO05D004109 3.3e-18 94.7 60 73.3
ClCG09G022700 Citrullus lanatus HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 71.7
FvH4_3g14740 Fragaria vesca HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 75.0
FAN16G2962 Fragaria x ananassa HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 75.0
FAN21G0618 Fragaria x ananassa HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 75.0
FAN25G2342 Fragaria x ananassa HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 75.0
THA.LOC104826329 Tarenaya hassleriana HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 75.0
TAR626G0906 Trochodendron aralioides HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 76.7
GSVIVG01012113001 Vitis vinifera HOM05D003489 ORTHO05D004109 4.4e-18 94.4 60 71.7
MELO3C012608.2 Cucumis melo HOM05D003489 ORTHO05D004109 5.7e-18 94.0 60 70.0
CsaV3_7G022900 Cucumis sativus L. HOM05D003489 ORTHO05D004109 5.7e-18 94.0 60 70.0
Hma1.2p1_0151F.1_g067260 Hydrangea macrophylla HOM05D003489 ORTHO05D004109 5.7e-18 94.0 60 73.3
arahy.Tifrunner.gnm1.ann1.JYF968 Arachis hypogaea HOM05D003489 ORTHO05D004109 7.4e-18 93.6 58 75.9
Cfa000694 Carpinus fangiana HOM05D003489 ORTHO05D004109 7.4e-18 93.6 60 70.0
Eucgr.F04461 Eucalyptus grandis HOM05D003489 ORTHO05D004109 7.4e-18 93.6 60 73.3
Medtr8g442750 Medicago truncatula HOM05D003489 ORTHO05D004109 7.4e-18 93.6 60 75.0
Rhsim04G0003000 Rhododendron simsii HOM05D003489 ORTHO05D004109 7.4e-18 93.6 60 73.3
arahy.Tifrunner.gnm1.ann1.T86MTP Arachis hypogaea HOM05D003489 ORTHO05D004109 9.7e-18 93.2 60 75.0
CSS0010976 Camellia sinensis var. sinensis HOM05D003489 ORTHO05D004109 9.7e-18 93.2 60 73.3
CANSAT80G0498 Cannabis sativa HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 73.3
Cfa019401 Carpinus fangiana HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 71.7
CDE06G1011 Ceratophyllum demersum HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 73.3
Lalb_Chr19g0133211 Lupinus albus HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 71.7
PSO541G1044 Papaver somniferum HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 73.3
PSO675G9327 Papaver somniferum HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 73.3
Prupe.4G132600 Prunus persica HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 73.3
TAR624G0253 Trochodendron aralioides HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 76.7
unitig_578.g16335 Utricularia gibba HOM05D003489 ORTHO05D004109 1.3e-17 92.8 60 76.7
ECA240G1189 Erigeron canadensis HOM05D003489 ORTHO05D004109 1.7e-17 92.4 61 75.4
Manes.14G009200 Manihot esculenta HOM05D003489 ORTHO05D004109 1.7e-17 92.4 60 75.0
Dinv19586 Davidia involucrata HOM05D003489 ORTHO05D004109 2.2e-17 92.0 60 75.0
DCAR_007785 Daucus carota HOM05D032355 ORTHO05D004109 2.8e-17 91.7 60 70.0
FAN16G1927 Fragaria x ananassa HOM05D003489 ORTHO05D004109 2.8e-17 91.7 60 71.7
MD10G1209100 Malus domestica HOM05D003489 ORTHO05D004109 2.8e-17 91.7 60 70.0
Potri.006G025400 Populus trichocarpa HOM05D003489 ORTHO05D004109 2.8e-17 91.7 60 75.0
Aqoxy1G01416 Aquilegia oxysepala HOM05D003489 ORTHO05D004109 3.7e-17 91.3 60 73.3
CiPaw.10G063600 Carya illinoinensis HOM05D003489 ORTHO05D004109 3.7e-17 91.3 60 70.0
Dinv09060 Davidia involucrata HOM05D003489 ORTHO05D004109 3.7e-17 91.3 60 71.7
RcHm_v2.0_Chr5g0024271 Rosa chinensis HOM05D003489 ORTHO05D004109 3.7e-17 91.3 60 71.7
Thecc.07G182300 Theobroma cacao HOM05D003489 ORTHO05D004109 3.7e-17 91.3 60 71.7
CSS0044390 Camellia sinensis var. sinensis HOM05D003489 ORTHO05D004109 4.8e-17 90.9 60 68.3
Gorai.009G353800 Gossypium raimondii HOM05D003489 ORTHO05D004109 4.8e-17 90.9 60 73.3
TWI38G2359 Tripterygium wilfordii HOM05D003489 ORTHO05D004109 4.8e-17 90.9 60 71.7
vmacro23254 Vaccinium macrocarpon HOM05D003489 ORTHO05D004109 4.8e-17 90.9 60 70.0
Haze_07801 Corylus avellana HOM05D003489 ORTHO05D004109 6.3e-17 90.5 60 70.0
Migut.M01523 Erythranthe guttata HOM05D003489 ORTHO05D004109 6.3e-17 90.5 61 75.4
FAN21G3976 Fragaria x ananassa HOM05D003489 ORTHO05D004109 6.3e-17 90.5 60 70.0
Sabra06G0018700 Salix brachista HOM05D003489 ORTHO05D004109 6.3e-17 90.5 60 73.3
Sp3g10955 Schrenkiella parvula HOM05D003489 ORTHO05D004109 6.3e-17 90.5 61 75.4
Sp3g10960 Schrenkiella parvula HOM05D003489 ORTHO05D004109 6.3e-17 90.5 61 75.4
PGSC0003DMG402022117 Solanum tuberosum HOM05D003489 ORTHO05D004109 6.3e-17 90.5 46 91.3
Thhalv10021233m.g Eutrema salsugineum HOM05D003489 ORTHO05D004109 8.2e-17 90.1 61 75.4
Aa31LG8G80 Aethionema arabicum HOM05D003489 ORTHO05D004109 1.1e-16 89.7 60 73.3
Ah.10g033720 Amaranthus hybridus HOM05D003489 ORTHO05D004109 1.1e-16 89.7 60 71.7
BcaB04g18721 Brassica carinata HOM05D003489 ORTHO05D004109 1.1e-16 89.7 61 75.4
Glyma.08G237400 Glycine max HOM05D003489 ORTHO05D004109 1.1e-16 89.7 61 75.4
Glyma.15G213100 Glycine max HOM05D003489 ORTHO05D004109 1.1e-16 89.7 61 75.4
Manes.03G069001 Manihot esculenta HOM05D003489 ORTHO05D004109 1.1e-16 89.7 60 70.0
HPP92_016428 Vanilla planifolia HOM05D003489 ORTHO05D004109 1.1e-16 89.7 60 68.3
HPP92_026361 Vanilla planifolia HOM05D003489 ORTHO05D004109 1.1e-16 89.7 60 68.3
Aqoxy72s003 Aquilegia oxysepala HOM05D003489 ORTHO05D004109 1.4e-16 89.4 56 75.0
A03p37810 Brassica napus HOM05D003489 ORTHO05D004109 1.4e-16 89.4 61 73.8
C03p45870 Brassica napus HOM05D001395 ORTHO05D004109 1.4e-16 89.4 61 73.8
BolC3t16863H Brassica oleracea HOM05D003489 ORTHO05D004109 1.4e-16 89.4 61 73.8
BraA03t12936Z Brassica rapa HOM05D003489 ORTHO05D004109 1.4e-16 89.4 61 73.8
Eucgr.D00036 Eucalyptus grandis HOM05D003489 ORTHO05D004109 1.4e-16 89.4 60 68.3
Gohir.A04G050800 Gossypium hirsutum HOM05D003489 ORTHO05D004109 1.4e-16 89.4 60 71.7
Gohir.A08G232000 Gossypium hirsutum HOM05D003489 ORTHO05D004109 1.4e-16 89.4 60 73.3
Gohir.D08G252400 Gossypium hirsutum HOM05D003489 ORTHO05D004109 1.4e-16 89.4 60 73.3
Gorai.004G269100 Gossypium raimondii HOM05D003489 ORTHO05D004109 1.4e-16 89.4 60 73.3
MD05G1229700 Malus domestica HOM05D003489 ORTHO05D004109 1.4e-16 89.4 60 68.3
RcHm_v2.0_Chr5g0020441 Rosa chinensis HOM05D003489 ORTHO05D004109 1.4e-16 89.4 60 70.0
Zm00001eb070900 Zea mays HOM05D003489 ORTHO05D004109 1.4e-16 89.4 70 62.9
ATR0697G295 Amborella trichopoda HOM05D003489 ORTHO05D004109 1.8e-16 89.0 60 71.7
BcaC01g04035 Brassica carinata HOM05D003489 ORTHO05D004109 1.8e-16 89.0 61 73.8
Haze_06095 Corylus avellana HOM05D003489 ORTHO05D004109 1.8e-16 89.0 60 66.7
PSO675G1648 Papaver somniferum HOM05D003489 ORTHO05D004109 1.8e-16 89.0 60 70.0
Psat4g137640 Pisum sativum HOM05D003489 ORTHO05D004109 1.8e-16 89.0 61 70.5
Cpa.g.sc32.29 Carica papaya HOM05D003489 ORTHO05D004109 2.4e-16 88.6 56 75.0
FvH4_3g12490 Fragaria vesca HOM05D003489 ORTHO05D004109 2.4e-16 88.6 60 70.0
FAN25G0305 Fragaria x ananassa HOM05D003489 ORTHO05D004109 2.4e-16 88.6 60 68.3
Os04g0614000 Oryza sativa ssp. japonica HOM05D003489 ORTHO05D004109 2.4e-16 88.6 70 61.4
Duzib268G0350 Durio zibethinus HOM05D003489 ORTHO05D004109 3.1e-16 88.2 60 73.3
PSO675G6571 Papaver somniferum HOM05D003489 ORTHO05D004109 4.1e-16 87.8 60 70.0
AagrBONN_evm.TU.Sc2ySwM_117.344 Anthoceros agrestis HOM05D003489 ORTHO05D004109 5.3e-16 87.4 60 68.3
AL3G24480 Arabidopsis lyrata HOM05D003489 ORTHO05D004109 5.3e-16 87.4 61 72.1
A05p36670 Brassica napus HOM05D001395 ORTHO05D004109 5.3e-16 87.4 61 73.8
BraA05t22470Z Brassica rapa HOM05D001395 ORTHO05D004109 5.3e-16 87.4 61 73.8
Hma1.2p1_0181F.1_g080070 Hydrangea macrophylla HOM05D003489 ORTHO05D004109 5.3e-16 87.4 60 68.3
BcaB06g25510 Brassica carinata HOM05D003489 ORTHO05D004109 7.0e-16 87.0 61 73.8
C05p55120 Brassica napus HOM05D001395 ORTHO05D004109 7.0e-16 87.0 61 73.8
BolC5t34180H Brassica oleracea HOM05D001395 ORTHO05D004109 7.0e-16 87.0 61 73.8
Ca_25908_v3 Cicer arietinum L. HOM05D003489 ORTHO05D004109 7.0e-16 87.0 61 72.1
Ca_30115_v3 Cicer arietinum L. HOM05D003489 ORTHO05D004109 7.0e-16 87.0 61 72.1
DCAR_019918 Daucus carota HOM05D003489 ORTHO05D004109 7.0e-16 87.0 60 71.7
MD05G1249900 Malus domestica HOM05D003489 ORTHO05D004109 7.0e-16 87.0 60 66.7
CAN.G15.4 Capsicum annuum HOM05D003489 ORTHO05D004109 9.1e-16 86.7 57 75.4
PGR004G2417 Punica granatum HOM05D003489 ORTHO05D004109 9.1e-16 86.7 60 68.3
VMungo1127G1841 Vigna mungo HOM05D003489 ORTHO05D004109 1.2e-15 86.3 61 73.8
Sed0021670 Sechium edule HOM05D003489 ORTHO05D004109 1.6e-15 85.9 60 68.3
COL.COLO4_19751 Corchorus olitorius HOM05D003489 ORTHO05D004109 2.0e-15 85.5 61 70.5
Lsat_1_v5_gn_7_75601 Lactuca sativa HOM05D003489 ORTHO05D004109 2.0e-15 85.5 61 72.1
Phvul.011G177250 Phaseolus vulgaris HOM05D003489 ORTHO05D004109 2.0e-15 85.5 61 72.1
Lj3g0015370 Lotus japonicus HOM05D003489 ORTHO05D004109 2.6e-15 85.1 60 70.0
AT3G12800 Arabidopsis thaliana HOM05D003489 ORTHO05D004109 3.5e-15 84.7 61 70.5
Carub.0003s1216 Capsella rubella HOM05D003489 ORTHO05D004109 3.5e-15 84.7 61 70.5
CARHR087330 Cardamine hirsuta HOM05D003489 ORTHO05D004109 3.5e-15 84.7 61 70.5
Duzib132G1003 Durio zibethinus HOM05D003489 ORTHO05D004109 4.5e-15 84.3 60 61.7
Potri.012G125900 Populus trichocarpa HOM05D003489 ORTHO05D004109 5.9e-15 84.0 61 67.2
PSO675G0014 Papaver somniferum HOM05D003489 ORTHO05D004109 1.0e-14 83.2 61 70.5
QL11p013743 Quercus lobata HOM05D003489 ORTHO05D004109 1.0e-14 83.2 60 63.3
Lj2A345T27 Lonicera japonica HOM05D003489 ORTHO05D004109 1.7e-14 82.4 60 63.3
PSO673G0003 Papaver somniferum HOM05D003489 ORTHO05D004109 1.7e-14 82.4 61 65.6
Pp3c20_21940 Physcomitrium patens HOM05D003489 ORTHO05D004109 1.7e-14 82.4 60 61.7
Prupe.4G113900 Prunus persica HOM05D003489 ORTHO05D004109 1.7e-14 82.4 60 65.0
COL.COLO4_17645 Corchorus olitorius HOM05D003489 ORTHO05D004109 2.9e-14 81.6 60 63.3
SEGI_16258 Sequoiadendron giganteum HOM05D003489 ORTHO05D004109 2.9e-14 81.6 68 61.8
Thecc.02G007100 Theobroma cacao HOM05D003489 ORTHO05D004109 3.8e-14 81.3 60 61.7
SEGI_41285 Sequoiadendron giganteum HOM05D003489 ORTHO05D004109 5.0e-14 80.9 57 68.4
Ciclev10016100m.g Citrus clementina HOM05D003489 ORTHO05D004109 6.5e-14 80.5 61 65.6
Gohir.D12G046300 Gossypium hirsutum HOM05D003489 ORTHO05D004109 6.5e-14 80.5 60 61.7
Gorai.008G049000 Gossypium raimondii HOM05D003489 ORTHO05D004109 8.5e-14 80.1 60 61.7
Mapoly0057s0046 Marchantia polymorpha HOM05D003489 ORTHO05D004109 1.5e-13 79.3 60 58.3
Sabra12G0094800 Salix brachista HOM05D003489 ORTHO05D004109 1.5e-13 79.3 61 65.6
Gohir.A12G047600 Gossypium hirsutum HOM05D003489 ORTHO05D004109 1.9e-13 79.0 60 60.0
TAR629G0486 Trochodendron aralioides HOM05D003489 ORTHO05D004109 2.5e-13 78.6 43 81.4
Pp3c23_13630 Physcomitrium patens HOM05D003489 ORTHO05D004109 7.2e-13 77.0 61 62.3
Duzib248G1596 Durio zibethinus HOM05D003489 ORTHO05D004109 9.4e-13 76.6 60 60.0
Lsat_1_v5_gn_3_107180 Lactuca sativa HOM05D003489 ORTHO05D004109 9.4e-13 76.6 60 65.0
CBR_g6539 Chara braunii HOM05D003489 ORTHO05D004109 1.2e-12 76.3 62 59.7
Zm00001eb430820 Zea mays HOM05D003489 ORTHO05D004109 2.7e-12 75.1 46 73.9
SalBow8G4095 Salvia bowleyana HOM05D003489 ORTHO05D004109 3.6e-12 74.7 62 62.9
HanXRQChr12g0381551 Helianthus annuus HOM05D003489 ORTHO05D004109 1.8e-11 72.4 60 60.0
SMO116G0107 Selaginella moellendorffii HOM05D003489 ORTHO05D004109 8.8e-11 70.1 60 50.0
ECA246G5026 Erigeron canadensis HOM05D003489 ORTHO05D004109 1.3e-09 66.2 60 56.7
Oeu034981.1 Olea europaea HOM05D003489 ORTHO05D004109 1.3e-09 66.2 38 76.3
Thecc.08G124400 Theobroma cacao HOM05D003489 ORTHO05D004109 1.7e-09 65.9 54 63.0
AT2G07640 Arabidopsis thaliana HOM05D003489 ORTHO05D004109 1.1e-08 63.2 48 68.8
SMO172G0050 Selaginella moellendorffii HOM05D003489 ORTHO05D004109 7.7e-07 57.0 60 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1485 Anthoceros agrestis HOM05D003489 ORTHO05D004109 1.3e-06 56.2 57 50.9


User provided reference genes

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