Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1081.17 Capsicum annuum HOM05D000026 ORTHO05D115810 2.3e-44 181.8 89 100.0
CAN.G623.11 Capsicum annuum HOM05D000026 ORTHO05D001292 2.2e-26 122.1 69 85.5
Nitab4.5_0007415g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001292 9.4e-22 106.7 68 77.9
Nitab4.5_0002736g0030 Nicotiana tabacum HOM05D000026 ORTHO05D001292 8.0e-21 103.6 68 76.5
Solyc07g065610.1 Solanum lycopersicum HOM05D000026 ORTHO05D001292 1.0e-20 103.2 69 72.5
Sopen07g033820 Solanum pennellii HOM05D000026 ORTHO05D001292 1.0e-20 103.2 69 72.5
Dinv10338 Davidia involucrata HOM05D000026 ORTHO05D001292 4.1e-17 91.3 70 70.0
DCAR_017080 Daucus carota HOM05D000026 ORTHO05D001292 5.4e-17 90.9 69 62.3
Cfa020187 Carpinus fangiana HOM05D000026 ORTHO05D001292 9.1e-17 90.1 65 72.3
Eucgr.F02045 Eucalyptus grandis HOM05D000026 ORTHO05D001292 2.0e-16 89.0 71 66.2
Hma1.2p1_2829F.1_g329170 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 2.0e-16 89.0 70 67.1
Lj1P890T26 Lonicera japonica HOM05D000026 ORTHO05D001292 2.0e-16 89.0 70 61.4
PGR083G0263 Punica granatum HOM05D000026 ORTHO05D001292 2.0e-16 89.0 65 66.2
Haze_09830 Corylus avellana HOM05D000026 ORTHO05D001292 4.5e-16 87.8 65 69.2
GSVIVG01014693001 Vitis vinifera HOM05D000026 ORTHO05D001292 1.0e-15 86.7 70 62.9
MSTRG.13021 Avicennia marina HOM05D000026 ORTHO05D001292 1.3e-15 86.3 65 66.2
Hma1.2p1_1402F.1_g281080 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 1.7e-15 85.9 72 62.5
MSTRG.14488 Avicennia marina HOM05D000026 ORTHO05D001292 2.3e-15 85.5 71 63.4
DCAR_013237 Daucus carota HOM05D000026 ORTHO05D001292 2.3e-15 85.5 65 64.6
Prupe.6G024000 Prunus persica HOM05D000026 ORTHO05D001292 2.9e-15 85.1 70 67.1
CANSAT11G0414 Cannabis sativa HOM05D000026 ORTHO05D001292 3.8e-15 84.7 73 57.5
Oeu046936.1 Olea europaea HOM05D000026 ORTHO05D001292 3.8e-15 84.7 65 64.6
Sabra11G0088200 Salix brachista HOM05D000026 ORTHO05D001292 5.0e-15 84.3 73 56.2
CiPaw.11G204400 Carya illinoinensis HOM05D000026 ORTHO05D001292 1.1e-14 83.2 65 67.7
CSS0030436 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 1.5e-14 82.8 69 62.3
Migut.H01754 Erythranthe guttata HOM05D000026 ORTHO05D001292 1.5e-14 82.8 65 64.6
Cc05_g14970 Coffea canephora HOM05D000026 ORTHO05D001292 1.9e-14 82.4 65 64.6
Lj8C179G7 Lonicera japonica HOM05D000026 ORTHO05D001292 2.5e-14 82.0 73 58.9
QL08p004008 Quercus lobata HOM05D000026 ORTHO05D001292 2.5e-14 82.0 65 63.1
Oeu049403.1 Olea europaea HOM05D000026 ORTHO05D001292 3.3e-14 81.6 70 64.3
Gohir.D13G135800 Gossypium hirsutum HOM05D000026 ORTHO05D001292 4.2e-14 81.3 73 60.3
TAR626G0329 Trochodendron aralioides HOM05D000026 ORTHO05D001292 4.2e-14 81.3 65 64.6
Gorai.013G152300 Gossypium raimondii HOM05D000026 ORTHO05D001292 5.5e-14 80.9 73 60.3
Oeu014363.1 Olea europaea HOM05D000026 ORTHO05D001292 5.5e-14 80.9 70 58.6
Cpa.g.sc12.115 Carica papaya HOM05D000026 ORTHO05D001292 1.2e-13 79.7 65 64.6
Sc03g0011340 Simmondsia chinensis HOM05D000026 ORTHO05D001292 1.2e-13 79.7 65 58.5
Sc03g0011430 Simmondsia chinensis HOM05D000026 ORTHO05D001292 1.2e-13 79.7 65 58.5
COL.COLO4_09838 Corchorus olitorius HOM05D000026 ORTHO05D001292 2.1e-13 79.0 61 65.6
Duzib268G1726 Durio zibethinus HOM05D000026 ORTHO05D001292 2.1e-13 79.0 61 65.6
Nn1g07521 Nelumbo nucifera HOM05D000026 ORTHO05D001292 2.1e-13 79.0 72 58.3
MD03G1026600 Malus domestica HOM05D000026 ORTHO05D001292 2.8e-13 78.6 65 61.5
Actinidia35402 Actinidia chinensis HOM05D000026 ORTHO05D001292 3.6e-13 78.2 64 59.4
CARHR269200 Cardamine hirsuta HOM05D000026 ORTHO05D001292 4.7e-13 77.8 71 60.6
CsaV3_3G004230 Cucumis sativus L. HOM05D000026 ORTHO05D001292 4.7e-13 77.8 65 61.5
SGA_v2.0_scaffold42G15983 Striga asiatica HOM05D000026 ORTHO05D001292 4.7e-13 77.8 65 61.5
ClCG10G004440 Citrullus lanatus HOM05D000026 ORTHO05D001292 6.1e-13 77.4 68 60.3
MELO3C014117.2 Cucumis melo HOM05D000026 ORTHO05D001292 6.1e-13 77.4 65 61.5
Thecc.07G013100 Theobroma cacao HOM05D000026 ORTHO05D001292 6.1e-13 77.4 61 63.9
vmacro09648 Vaccinium macrocarpon HOM05D000026 ORTHO05D001292 6.1e-13 77.4 65 63.1
Manes.15G059400 Manihot esculenta HOM05D000026 ORTHO05D001292 8.0e-13 77.0 71 56.3
AT5G55830 Arabidopsis thaliana HOM05D000026 ORTHO05D001292 1.0e-12 76.6 71 57.7
Ciclev10007682m.g Citrus clementina HOM05D000026 ORTHO05D001292 1.0e-12 76.6 62 64.5
Sp6g17710 Schrenkiella parvula HOM05D000026 ORTHO05D001292 1.0e-12 76.6 60 65.0
Rhsim04G0012400 Rhododendron simsii HOM05D000026 ORTHO05D001292 1.8e-12 75.9 65 64.6
Actinidia37153 Actinidia chinensis HOM05D000026 ORTHO05D001292 2.3e-12 75.5 59 61.0
RcHm_v2.0_Chr5g0077031 Rosa chinensis HOM05D000026 ORTHO05D001292 2.3e-12 75.5 63 63.5
BcaB08g35943 Brassica carinata HOM05D000026 ORTHO05D001292 3.0e-12 75.1 60 65.0
Duzib213G1027 Durio zibethinus HOM05D000026 ORTHO05D001292 3.0e-12 75.1 61 62.3
Gohir.D01G062000 Gossypium hirsutum HOM05D000026 ORTHO05D001292 5.2e-12 74.3 59 64.4
Gorai.002G100600 Gossypium raimondii HOM05D000026 ORTHO05D001292 5.2e-12 74.3 59 64.4
Potri.011G093700 Populus trichocarpa HOM05D000026 ORTHO05D001292 5.2e-12 74.3 66 59.1
THA.LOC104817706 Tarenaya hassleriana HOM05D000026 ORTHO05D001292 8.9e-12 73.6 65 56.9
A10p13040 Brassica napus HOM05D000026 ORTHO05D001292 1.5e-11 72.8 59 62.7
Carub.0008s1618 Capsella rubella HOM05D000026 ORTHO05D001292 1.5e-11 72.8 71 53.5
Potri.001G368300 Populus trichocarpa HOM05D000026 ORTHO05D001292 1.5e-11 72.8 66 54.5
BcaC04g20198 Brassica carinata HOM05D000026 ORTHO05D001292 2.0e-11 72.4 58 63.8
C09p46760 Brassica napus HOM05D000026 ORTHO05D001292 2.0e-11 72.4 58 63.8
Sed0012973 Sechium edule HOM05D000026 ORTHO05D001292 2.0e-11 72.4 70 57.1
Thhalv10012869m.g Eutrema salsugineum HOM05D000026 ORTHO05D001292 2.6e-11 72.0 59 61.0
PSO541G4725 Papaver somniferum HOM05D000026 ORTHO05D001292 2.6e-11 72.0 63 54.0
PSO675G1833 Papaver somniferum HOM05D000026 ORTHO05D001292 2.6e-11 72.0 63 54.0
TWI38G0371 Tripterygium wilfordii HOM05D000026 ORTHO05D001292 2.6e-11 72.0 65 60.0
Sabra16G0241400 Salix brachista HOM05D000026 ORTHO05D001292 3.4e-11 71.6 65 56.9
AUR62017109 Chenopodium quinoa HOM05D000026 ORTHO05D001292 5.7e-11 70.9 63 55.6
Aqoxy4G02293 Aquilegia oxysepala HOM05D000026 ORTHO05D001292 7.5e-11 70.5 65 53.8
AL8G31390 Arabidopsis lyrata HOM05D000026 ORTHO05D001292 7.5e-11 70.5 71 53.5
Lsat_1_v5_gn_7_115040 Lactuca sativa HOM05D000026 ORTHO05D001292 1.3e-10 69.7 73 47.9
Aa31LG3G11730 Aethionema arabicum HOM05D000026 ORTHO05D001292 2.2e-10 68.9 60 58.3
Ah.04g166600 Amaranthus hybridus HOM05D000026 ORTHO05D001292 2.2e-10 68.9 61 54.1
LjContig00081g0022422 Lotus japonicus HOM05D000026 ORTHO05D001292 2.2e-10 68.9 60 58.3
FvH4_3g42990 Fragaria vesca HOM05D000026 ORTHO05D001292 2.8e-10 68.6 63 57.1
FAN11G2488 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.8e-10 68.6 63 57.1
FAN11G3457 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.8e-10 68.6 63 57.1
FAN16G1032 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.8e-10 68.6 63 57.1
FAN21G1305 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.8e-10 68.6 63 57.1
FAN25G3075 Fragaria x ananassa HOM05D000026 ORTHO05D001292 2.8e-10 68.6 63 57.1
Lalb_Chr17g0348971 Lupinus albus HOM05D000026 ORTHO05D001292 2.8e-10 68.6 59 57.6
ECA236G4437 Erigeron canadensis HOM05D000026 ORTHO05D001292 3.7e-10 68.2 58 55.2
Gohir.A01G091800 Gossypium hirsutum HOM05D000026 ORTHO05D001292 6.3e-10 67.4 63 55.6
AUR62036462 Chenopodium quinoa HOM05D000026 ORTHO05D001292 8.3e-10 67.0 63 52.4
Lsat_1_v5_gn_9_88680 Lactuca sativa HOM05D000026 ORTHO05D001292 8.3e-10 67.0 65 47.7
MBI15_g03897_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D001292 1.8e-09 65.9 74 45.9
arahy.Tifrunner.gnm1.ann1.W6VWGY Arachis hypogaea HOM05D000026 ORTHO05D001292 2.4e-09 65.5 61 57.4
arahy.Tifrunner.gnm1.ann1.YN37NC Arachis hypogaea HOM05D000026 ORTHO05D001292 2.4e-09 65.5 61 57.4
Hma1.2p1_1516F.1_g288270 Hydrangea macrophylla HOM05D000026 ORTHO05D001292 2.4e-09 65.5 41 73.2
Ca_06398_v3 Cicer arietinum L. HOM05D000026 ORTHO05D001292 3.1e-09 65.1 63 57.1
Sed0022768 Sechium edule HOM05D000026 ORTHO05D001292 3.1e-09 65.1 65 50.8
HanXRQChr03g0074001 Helianthus annuus HOM05D000026 ORTHO05D001292 7.0e-09 63.9 64 50.0
HanXRQChr11g0333331 Helianthus annuus HOM05D000026 ORTHO05D001292 1.6e-08 62.8 65 49.2
Psat2g007240 Pisum sativum HOM05D000026 ORTHO05D001292 7.8e-08 60.5 62 53.2
CSS0010602 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D001292 2.3e-07 58.9 52 55.8
CDE10G0133 Ceratophyllum demersum HOM05D000026 ORTHO05D001292 2.3e-07 58.9 38 68.4
TPR.G8613 Trifolium pratense HOM05D000026 ORTHO05D001292 2.3e-07 58.9 63 52.4
Zm00001eb280870 Zea mays HOM05D000026 ORTHO05D001292 5.0e-07 57.8 66 45.5
ECA240G2228 Erigeron canadensis HOM05D000026 ORTHO05D001292 1.1e-06 56.6 62 45.2
Medtr5g095970 Medicago truncatula HOM05D000026 ORTHO05D001292 1.1e-06 56.6 61 54.1
Os06g0285400 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D001292 1.1e-06 56.6 48 54.2
SHI26510 Sapria himalayana HOM05D000026 ORTHO05D001292 1.1e-06 56.6 61 47.5
Medtr3g007870 Medicago truncatula HOM05D000026 ORTHO05D001292 1.5e-06 56.2 48 62.5
SEGI_31751 Sequoiadendron giganteum HOM05D000026 ORTHO05D001292 1.5e-06 56.2 64 46.9
ATR0751G122 Amborella trichopoda HOM05D000026 ORTHO05D001292 3.3e-06 55.1 63 46.0
CDE10G0743 Ceratophyllum demersum HOM05D000297 ORTHO05D000193 3.3e-06 55.1 54 50.0
BolC9t57527H Brassica oleracea HOM05D000026 ORTHO05D001292 5.6e-06 54.3 41 63.4
Glyma.14G013300 Glycine max HOM05D000026 ORTHO05D001292 7.3e-06 53.9 55 52.7
Glyma.17G150600 Glycine max HOM05D000026 ORTHO05D001292 9.5e-06 53.5 55 50.9


User provided reference genes

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