Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 1.4e-63 246.1 129 100.0
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 9.1e-58 226.9 132 91.7
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 2.6e-57 225.3 132 90.9
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 1.7e-56 222.6 132 89.4
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 4.2e-55 218.0 132 87.1
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 9.4e-55 216.9 130 88.5
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.2e-54 216.5 132 87.9
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 1.6e-54 216.1 125 91.2
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.6e-46 189.5 127 77.2
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 1.2e-44 183.3 128 71.1
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 1.2e-44 183.3 129 71.3
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.6e-44 182.2 129 73.6
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 4.4e-44 181.4 126 73.0
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 7.5e-44 180.6 109 81.7
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 1.3e-43 179.9 130 70.8
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.3e-43 179.9 132 72.0
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 2.8e-43 178.7 125 72.0
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 3.7e-43 178.3 134 70.9
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 3.7e-43 178.3 130 70.8
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 4.8e-43 177.9 128 71.1
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 4.8e-43 177.9 111 79.3
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 6.3e-43 177.6 130 70.0
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 6.3e-43 177.6 130 70.0
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.1e-42 176.8 128 69.5
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.1e-42 176.8 128 69.5
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.8e-42 176.0 127 70.9
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.8e-42 176.0 130 69.2
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 2.4e-42 175.6 120 71.7
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 9.1e-42 173.7 112 75.0
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-41 173.3 129 68.2
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.6e-41 172.9 129 70.5
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.6e-41 172.9 128 69.5
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.0e-41 172.6 128 68.0
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 2.0e-41 172.6 118 72.0
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 3.5e-41 171.8 112 74.1
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 4.5e-41 171.4 131 71.0
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 4.5e-41 171.4 130 68.5
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 5.9e-41 171.0 130 69.2
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 1.0e-40 170.2 112 73.2
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 1.3e-40 169.9 129 67.4
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 1.7e-40 169.5 117 70.9
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.7e-40 169.5 128 68.0
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 1.7e-40 169.5 128 65.6
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 1.7e-40 169.5 131 67.9
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 2.9e-40 168.7 124 70.2
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 3.8e-40 168.3 128 68.0
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 5.0e-40 167.9 109 72.5
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 6.5e-40 167.5 142 64.1
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.1e-39 166.8 126 69.8
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.5e-39 165.6 128 66.4
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.2e-39 165.2 126 67.5
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.2e-39 165.2 133 67.7
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 3.2e-39 165.2 133 67.7
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 4.2e-39 164.9 127 65.4
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 4.2e-39 164.9 160 58.8
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 4.2e-39 164.9 102 75.5
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.5e-39 164.5 105 73.3
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 5.5e-39 164.5 128 64.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 7.2e-39 164.1 102 78.4
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 7.2e-39 164.1 132 63.6
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 7.2e-39 164.1 125 64.0
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 9.4e-39 163.7 127 64.6
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 9.4e-39 163.7 128 66.4
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 9.4e-39 163.7 102 76.5
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 1.2e-38 163.3 127 65.4
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 2.1e-38 162.5 127 63.8
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.1e-38 162.5 128 64.8
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 2.1e-38 162.5 130 65.4
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 2.7e-38 162.2 105 72.4
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 4.7e-38 161.4 111 66.7
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.4e-37 159.8 118 66.1
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.4e-37 159.8 111 69.4
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 1.8e-37 159.5 128 64.8
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 3.0e-37 158.7 135 64.4
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 4.0e-37 158.3 135 63.7
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 4.0e-37 158.3 106 72.6
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 5.2e-37 157.9 99 72.7
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 8.8e-37 157.1 128 65.6
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 8.8e-37 157.1 128 65.6
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 8.8e-37 157.1 128 65.6
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 8.8e-37 157.1 107 71.0
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.0e-36 156.0 127 65.4
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 3.4e-36 155.2 128 64.8
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 3.4e-36 155.2 104 70.2
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 4.4e-36 154.8 118 65.3
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 5.7e-36 154.5 119 68.1
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 9.8e-36 153.7 111 66.7
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 9.8e-36 153.7 124 65.3
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 9.8e-36 153.7 140 60.7
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 1.7e-35 152.9 113 64.6
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 1.7e-35 152.9 126 62.7
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 3.7e-35 151.8 131 61.1
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 1.1e-34 150.2 128 61.7
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 2.4e-34 149.1 109 63.3
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.7e-33 145.6 158 54.4
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 3.5e-33 145.2 167 50.3
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 2.9e-32 142.1 122 58.2
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 5.0e-32 141.4 142 55.6
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.9e-31 139.4 101 68.3
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 2.5e-31 139.0 161 50.9
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 9.5e-31 137.1 82 80.5
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-30 136.7 104 67.3
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.6e-30 136.3 104 66.3
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.2e-28 130.2 124 55.6
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.2e-28 130.2 104 67.3
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 3.4e-28 128.6 107 58.9
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 6.3e-27 124.4 75 74.7
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 1.8e-26 122.9 102 58.8
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 5.0e-24 114.8 65 84.6
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.5e-23 113.2 84 66.7
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.9e-23 112.8 108 64.8
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 3.3e-23 112.1 65 83.1
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 2.1e-22 109.4 64 78.1
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 3.0e-21 105.5 109 52.3
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 4.0e-21 105.1 64 78.1
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 8.9e-21 104.0 65 72.3
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 2.4e-18 95.9 81 65.4
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 7.0e-18 94.4 104 46.2
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 1.2e-17 93.6 97 52.6
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 6.6e-16 87.8 98 38.8
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 1.5e-15 86.7 65 64.6
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 1.9e-15 86.3 99 42.4
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 4.7e-14 81.6 57 68.4
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 8.9e-13 77.4 90 36.7
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.2e-09 67.0 63 58.7
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 3.6e-06 55.5 76 43.4


User provided reference genes

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