Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 4.0e-90 334.7 168 100.0
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 7.2e-63 244.2 168 75.0
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 1.2e-62 243.4 168 74.4
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 6.1e-62 241.1 168 73.8
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 9.0e-58 227.3 172 71.5
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 4.8e-51 204.9 170 65.3
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 8.2e-51 204.1 175 67.4
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.1e-50 203.8 168 66.1
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 1.8e-50 203.0 157 69.4
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 4.1e-50 201.8 172 65.1
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 9.1e-50 200.7 163 66.3
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 1.2e-49 200.3 158 66.5
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 2.0e-49 199.5 171 64.3
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 7.7e-49 197.6 168 63.1
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 1.0e-48 197.2 162 63.6
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.3e-48 196.8 177 61.0
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 1.7e-48 196.4 169 64.5
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 1.7e-48 196.4 169 64.5
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 2.2e-48 196.1 110 80.9
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 5.0e-48 194.9 176 62.5
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 6.5e-48 194.5 170 64.7
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 8.5e-48 194.1 110 79.1
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 8.5e-48 194.1 168 60.1
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 1.1e-47 193.7 171 62.0
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.2e-47 191.8 112 78.6
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 5.5e-47 191.4 112 77.7
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 5.5e-47 191.4 112 77.7
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 7.2e-47 191.0 159 63.5
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 9.4e-47 190.7 126 73.0
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 9.4e-47 190.7 127 72.4
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 1.2e-46 190.3 155 63.9
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 2.1e-46 189.5 177 59.3
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.1e-46 189.5 110 79.1
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 2.1e-46 189.5 110 79.1
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 4.7e-46 188.3 125 72.0
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 4.7e-46 188.3 125 72.0
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 4.7e-46 188.3 137 67.9
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 4.7e-46 188.3 171 59.1
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 4.7e-46 188.3 166 59.6
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 6.1e-46 188.0 174 59.2
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 6.1e-46 188.0 174 59.2
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 6.1e-46 188.0 111 77.5
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 6.1e-46 188.0 141 68.8
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 7.9e-46 187.6 168 61.9
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 7.9e-46 187.6 111 79.3
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 7.9e-46 187.6 180 58.3
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 1.0e-45 187.2 98 83.7
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 1.0e-45 187.2 124 73.4
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 1.4e-45 186.8 173 59.5
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 1.4e-45 186.8 168 58.3
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.4e-45 186.8 168 57.1
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 1.4e-45 186.8 163 63.8
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 1.4e-45 186.8 143 67.1
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 1.8e-45 186.4 169 59.2
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 1.8e-45 186.4 152 61.8
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 2.3e-45 186.0 149 61.7
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 2.3e-45 186.0 170 58.8
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.3e-45 186.0 110 80.0
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 2.3e-45 186.0 181 59.1
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 3.0e-45 185.7 172 59.3
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.0e-45 185.7 169 59.2
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.0e-45 185.7 169 59.2
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 3.0e-45 185.7 169 60.4
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 5.1e-45 184.9 131 68.7
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 8.8e-45 184.1 160 63.8
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 8.8e-45 184.1 168 60.1
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 1.5e-44 183.3 181 58.0
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 2.0e-44 183.0 110 76.4
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 2.6e-44 182.6 110 73.6
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 2.6e-44 182.6 172 60.5
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 4.4e-44 181.8 121 69.4
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 4.4e-44 181.8 171 57.3
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 5.7e-44 181.4 163 58.9
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 5.7e-44 181.4 191 55.5
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 7.4e-44 181.0 160 61.9
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 7.4e-44 181.0 155 60.6
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 1.7e-43 179.9 169 59.8
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.7e-43 179.9 137 65.7
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 2.8e-43 179.1 163 58.9
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 2.8e-43 179.1 173 58.4
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 2.8e-43 179.1 160 59.4
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 2.8e-43 179.1 174 55.7
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 4.8e-43 178.3 156 60.9
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 6.3e-43 177.9 173 56.6
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 8.2e-43 177.6 126 70.6
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 8.2e-43 177.6 152 63.2
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 8.2e-43 177.6 191 54.5
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 1.4e-42 176.8 171 57.3
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 1.8e-42 176.4 156 61.5
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 2.4e-42 176.0 169 56.8
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 5.3e-42 174.9 153 60.1
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 2.0e-41 172.9 166 56.6
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 4.5e-41 171.8 136 63.2
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 7.7e-41 171.0 101 73.3
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 1.0e-40 170.6 96 77.1
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 1.0e-40 170.6 163 58.3
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 3.8e-40 168.7 173 54.9
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 3.8e-40 168.7 96 77.1
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 6.5e-40 167.9 169 54.4
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 6.5e-40 167.9 134 61.9
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 1.1e-39 167.2 165 54.5
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 1.5e-39 166.8 241 44.0
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 2.5e-39 166.0 114 68.4
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 1.6e-38 163.3 101 74.3
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 1.5e-36 156.8 147 57.1
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.3e-35 153.7 91 75.8
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 7.7e-33 144.4 88 72.7
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 2.7e-30 136.0 119 58.0
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.3e-29 132.9 143 56.6
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 5.2e-29 131.7 98 63.3
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 2.0e-25 119.8 143 50.3
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 7.2e-23 111.3 122 51.6
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 1.2e-22 110.5 65 75.4
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 8.0e-22 107.8 75 65.3
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 6.8e-21 104.8 123 49.6
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 7.0e-18 94.7 123 47.2
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 5.7e-12 75.1 36 94.4
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 4.9e-11 72.0 35 91.4


User provided reference genes

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