Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1079.5 Capsicum annuum HOM05D005799 ORTHO05D007150 2.4e-90 335.5 174 100.0
CAN.G23.11 Capsicum annuum HOM05D005799 ORTHO05D115406 3.1e-29 132.5 86 81.4
CAN.G29.8 Capsicum annuum HOM05D000915 ORTHO05D001662 5.4e-29 131.7 74 90.5
CAN.G335.7 Capsicum annuum HOM05D005799 ORTHO05D007150 3.4e-23 112.5 81 74.1
Nitab4.5_0000837g0110 Nicotiana tabacum HOM05D005799 ORTHO05D007150 2.2e-22 109.8 81 72.8
CAN.G1079.6 Capsicum annuum HOM05D005799 ORTHO05D007150 2.8e-22 109.4 81 74.1
Nitab4.5_0000151g0390 Nicotiana tabacum HOM05D005799 ORTHO05D007150 6.3e-22 108.2 81 71.6
Solyc08g066730.3 Solanum lycopersicum HOM05D005799 ORTHO05D007150 6.3e-22 108.2 82 75.6
Sopen08g020700 Solanum pennellii HOM05D005799 ORTHO05D007150 6.3e-22 108.2 82 75.6
Peaxi162Scf00039g00141 Petunia axillaris HOM05D005799 ORTHO05D007150 3.1e-21 105.9 81 69.1
Peaxi162Scf00161g00018 Petunia axillaris HOM05D005799 ORTHO05D007150 1.2e-20 104.0 76 72.4
PGSC0003DMG400004314 Solanum tuberosum HOM05D005799 ORTHO05D007150 3.5e-20 102.4 91 69.2
TWI60G1445 Tripterygium wilfordii HOM05D005799 ORTHO05D007150 9.5e-18 94.4 91 57.1
CSS0005333 Camellia sinensis var. sinensis HOM05D005799 ORTHO05D007150 6.1e-17 91.7 81 61.7
CSS0012502 Camellia sinensis var. sinensis HOM05D005799 ORTHO05D007150 6.1e-17 91.7 81 61.7
Cc08_g16640 Coffea canephora HOM05D005799 ORTHO05D007150 8.0e-17 91.3 83 61.4
Prupe.5G128200 Prunus persica HOM05D005799 ORTHO05D007150 2.3e-16 89.7 80 62.5
Lalb_Chr10g0096751 Lupinus albus HOM05D005799 ORTHO05D007150 3.0e-16 89.4 90 54.4
Ciclev10019070m.g Citrus clementina HOM05D005799 ORTHO05D007150 5.2e-16 88.6 58 75.9
DCAR_006533 Daucus carota HOM05D005799 ORTHO05D007150 1.2e-15 87.4 81 59.3
Sabra01G0061800 Salix brachista HOM05D005799 ORTHO05D007150 1.2e-15 87.4 81 56.8
Potri.001G085200 Populus trichocarpa HOM05D005799 ORTHO05D007150 2.6e-15 86.3 81 56.8
Medtr8g104280 Medicago truncatula HOM05D005799 ORTHO05D007150 5.8e-15 85.1 80 62.5
Oeu010742.3 Olea europaea HOM05D005799 ORTHO05D007150 5.8e-15 85.1 81 58.0
Lj3g0012917 Lotus japonicus HOM05D005799 ORTHO05D007150 9.8e-15 84.3 91 56.0
Manes.02G004000 Manihot esculenta HOM05D005799 ORTHO05D007150 9.8e-15 84.3 81 56.8
RcHm_v2.0_Chr7g0186751 Rosa chinensis HOM05D005799 ORTHO05D007150 9.8e-15 84.3 66 63.6
Atru.chr9.1907 Acer truncatum HOM05D005799 ORTHO05D007150 1.7e-14 83.6 81 55.6
MSTRG.12196 Avicennia marina HOM05D005799 ORTHO05D007150 1.7e-14 83.6 81 58.0
Haze_09149 Corylus avellana HOM05D005799 ORTHO05D007150 2.2e-14 83.2 62 67.7
Dinv12007 Davidia involucrata HOM05D005799 ORTHO05D007150 2.2e-14 83.2 81 53.1
PGR031G2117 Punica granatum HOM05D005799 ORTHO05D007150 2.2e-14 83.2 89 51.7
TAR375G0991 Trochodendron aralioides HOM05D005799 ORTHO05D007150 2.2e-14 83.2 80 57.5
GSVIVG01019635001 Vitis vinifera HOM05D005799 ORTHO05D007150 2.2e-14 83.2 81 56.8
Hma1.2p1_0440F.1_g153730 Hydrangea macrophylla HOM05D005799 ORTHO05D007150 2.9e-14 82.8 81 56.8
Lalb_Chr04g0259181 Lupinus albus HOM05D005799 ORTHO05D007150 2.9e-14 82.8 83 56.6
VMungo0331G1577 Vigna mungo HOM05D005799 ORTHO05D007150 2.9e-14 82.8 91 54.9
MD06G1116900 Malus domestica HOM05D005799 ORTHO05D007150 6.4e-14 81.6 55 72.7
MD14G1124400 Malus domestica HOM05D005799 ORTHO05D007150 6.4e-14 81.6 55 72.7
CDE04G1382 Ceratophyllum demersum HOM05D005799 ORTHO05D007150 8.3e-14 81.3 56 73.2
FvH4_5g11050 Fragaria vesca HOM05D005799 ORTHO05D007150 8.3e-14 81.3 75 58.7
Ca_17312_v3 Cicer arietinum L. HOM05D005799 ORTHO05D007150 1.1e-13 80.9 80 60.0
Eucgr.D01689 Eucalyptus grandis HOM05D005799 ORTHO05D007150 1.1e-13 80.9 58 67.2
FAN18G1901 Fragaria x ananassa HOM05D005799 ORTHO05D007150 1.4e-13 80.5 75 58.7
Glyma.07G067100 Glycine max HOM05D005799 ORTHO05D007150 1.4e-13 80.5 91 53.8
FAN08G2876 Fragaria x ananassa HOM05D005799 ORTHO05D007150 1.8e-13 80.1 67 65.7
FAN13G1348 Fragaria x ananassa HOM05D005799 ORTHO05D007150 1.8e-13 80.1 67 64.2
Rhsim02G0251100 Rhododendron simsii HOM05D005799 ORTHO05D007150 1.8e-13 80.1 82 56.1
COL.COLO4_10780 Corchorus olitorius HOM05D005799 ORTHO05D007150 3.2e-13 79.3 79 57.0
FAN04G0556 Fragaria x ananassa HOM05D005799 ORTHO05D007150 3.2e-13 79.3 67 64.2
Glyma.16G033100 Glycine max HOM05D005799 ORTHO05D007150 3.2e-13 79.3 73 60.3
MBI17_g40130_MAGBIO Magnolia biondii HOM05D005799 ORTHO05D007150 3.2e-13 79.3 59 66.1
Phvul.010G102500 Phaseolus vulgaris HOM05D005799 ORTHO05D007150 3.2e-13 79.3 91 53.8
ClCG10G000860 Citrullus lanatus HOM05D005799 ORTHO05D007150 4.1e-13 79.0 58 69.0
Duzib205G1547 Durio zibethinus HOM05D005799 ORTHO05D007150 4.1e-13 79.0 79 54.4
RcHm_v2.0_Chr7g0186261 Rosa chinensis HOM05D005799 ORTHO05D007150 4.1e-13 79.0 67 59.7
Cfa011938 Carpinus fangiana HOM05D005799 ORTHO05D007150 5.4e-13 78.6 55 74.5
Lj8C201G21 Lonicera japonica HOM05D005799 ORTHO05D007150 5.4e-13 78.6 80 53.8
Psat7g010960 Pisum sativum HOM05D005799 ORTHO05D007150 5.4e-13 78.6 74 60.8
SalBow6G6472 Salvia bowleyana HOM05D005799 ORTHO05D007150 5.4e-13 78.6 79 55.7
MBI12_g03921_MAGBIO Magnolia biondii HOM05D005799 ORTHO05D007150 7.0e-13 78.2 59 66.1
TPR.G37954 Trifolium pratense HOM05D005799 ORTHO05D007150 7.0e-13 78.2 96 55.2
MELO3C013781.2 Cucumis melo HOM05D005799 ORTHO05D007150 9.2e-13 77.8 58 67.2
CsaV3_3G000940 Cucumis sativus L. HOM05D005799 ORTHO05D007150 9.2e-13 77.8 58 67.2
QL02p029127 Quercus lobata HOM05D005799 ORTHO05D007150 9.2e-13 77.8 63 65.1
CiPaw.12G078600 Carya illinoinensis HOM05D005799 ORTHO05D007150 1.6e-12 77.0 50 76.0
THA.LOC104806452 Tarenaya hassleriana HOM05D005799 ORTHO05D007150 2.0e-12 76.6 55 65.5
Thecc.03G222800 Theobroma cacao HOM05D005799 ORTHO05D007150 2.0e-12 76.6 79 55.7
TPR.G32682 Trifolium pratense HOM05D005799 ORTHO05D007150 2.0e-12 76.6 80 56.2
arahy.Tifrunner.gnm1.ann1.3PG13R Arachis hypogaea HOM05D005799 ORTHO05D007150 2.7e-12 76.3 79 55.7
arahy.Tifrunner.gnm1.ann1.YTN4Z3 Arachis hypogaea HOM05D005799 ORTHO05D007150 2.7e-12 76.3 79 55.7
Medtr2g099870 Medicago truncatula HOM05D005799 ORTHO05D007150 2.7e-12 76.3 56 69.6
Sed0014517 Sechium edule HOM05D005799 ORTHO05D007150 2.7e-12 76.3 58 67.2
CANSAT21G1656 Cannabis sativa HOM05D005799 ORTHO05D007150 3.5e-12 75.9 75 53.3
vmacro11512 Vaccinium macrocarpon HOM05D005799 ORTHO05D007150 3.5e-12 75.9 79 55.7
Ah.07g197850 Amaranthus hybridus HOM05D005799 ORTHO05D007150 6.0e-12 75.1 81 49.4
Gohir.D12G240500 Gossypium hirsutum HOM05D005799 ORTHO05D007150 6.0e-12 75.1 79 53.2
Gorai.008G257500 Gossypium raimondii HOM05D005799 ORTHO05D007150 6.0e-12 75.1 79 53.2
Sed0010941 Sechium edule HOM05D005799 ORTHO05D007150 6.0e-12 75.1 58 65.5
ATR0810G200 Amborella trichopoda HOM05D005799 ORTHO05D007150 1.0e-11 74.3 87 46.0
AUR62019903 Chenopodium quinoa HOM05D005799 ORTHO05D007150 1.0e-11 74.3 82 48.8
Gohir.A12G239300 Gossypium hirsutum HOM05D005799 ORTHO05D007150 1.0e-11 74.3 79 53.2
Lsat_1_v5_gn_3_13660 Lactuca sativa HOM05D005799 ORTHO05D007150 1.0e-11 74.3 47 74.5
HanXRQChr17g0534781 Helianthus annuus HOM05D005799 ORTHO05D007150 2.3e-11 73.2 87 50.6
AUR62007039 Chenopodium quinoa HOM05D005799 ORTHO05D007150 3.0e-11 72.8 82 48.8
PSO063G0471 Papaver somniferum HOM05D005799 ORTHO05D007150 5.0e-11 72.0 47 70.2
SGA_v2.0_scaffold104G30268 Striga asiatica HOM05D005799 ORTHO05D007150 5.0e-11 72.0 60 61.7
PSO782G0762 Papaver somniferum HOM05D005799 ORTHO05D007150 6.6e-11 71.6 47 68.1
Zm00001eb250310 Zea mays HOM05D005799 ORTHO05D007150 1.1e-10 70.9 59 62.7
EL10Ac5g12455 Beta vulgaris HOM05D005799 ORTHO05D007150 1.5e-10 70.5 81 46.9
Nitab4.5_0000025g0620 Nicotiana tabacum HOM05D000915 ORTHO05D001662 2.5e-10 69.7 85 56.5
Migut.I01141 Erythranthe guttata HOM05D005799 ORTHO05D007150 3.3e-10 69.3 48 70.8
Sp6g06740 Schrenkiella parvula HOM05D005799 ORTHO05D007150 3.3e-10 69.3 45 68.9
BcaB01g01512 Brassica carinata HOM05D005799 ORTHO05D007150 4.3e-10 68.9 45 68.9
BcaC04g21070 Brassica carinata HOM05D005799 ORTHO05D007150 4.3e-10 68.9 45 68.9
A09p28470 Brassica napus HOM05D005799 ORTHO05D007150 4.3e-10 68.9 45 68.9
C09p36040 Brassica napus HOM05D005799 ORTHO05D007150 4.3e-10 68.9 45 68.9
BolC9t56443H Brassica oleracea HOM05D005799 ORTHO05D007150 4.3e-10 68.9 45 68.9
BraA09t38412Z Brassica rapa HOM05D005799 ORTHO05D007150 4.3e-10 68.9 45 68.9
SEGI_05717 Sequoiadendron giganteum HOM05D005799 ORTHO05D007150 4.3e-10 68.9 90 46.7
Aa31LG9G11310 Aethionema arabicum HOM05D005799 ORTHO05D007150 5.6e-10 68.6 76 48.7
AT4G10760 Arabidopsis thaliana HOM05D005799 ORTHO05D007150 5.6e-10 68.6 45 66.7
Carub.0006s2954 Capsella rubella HOM05D005799 ORTHO05D007150 5.6e-10 68.6 45 66.7
ECA246G3622 Erigeron canadensis HOM05D005799 ORTHO05D007150 5.6e-10 68.6 47 68.1
CARHR255850 Cardamine hirsuta HOM05D005799 ORTHO05D007150 9.5e-10 67.8 45 66.7
SHI06892 Sapria himalayana HOM05D005799 ORTHO05D007150 9.5e-10 67.8 75 54.7
Solyc12g026400.2 Solanum lycopersicum HOM05D000915 ORTHO05D001662 9.5e-10 67.8 91 56.0
Sopen12g012030 Solanum pennellii HOM05D000915 ORTHO05D001662 9.5e-10 67.8 91 56.0
AL6G44810 Arabidopsis lyrata HOM05D005799 ORTHO05D007150 1.6e-09 67.0 45 64.4
Thhalv10028481m.g Eutrema salsugineum HOM05D005799 ORTHO05D007150 1.6e-09 67.0 45 64.4
HPP92_007392 Vanilla planifolia HOM05D005799 ORTHO05D007150 2.1e-09 66.6 37 83.8
Nitab4.5_0001724g0090 Nicotiana tabacum HOM05D000915 ORTHO05D001662 2.8e-09 66.2 85 57.6
Os02g0672600 Oryza sativa ssp. japonica HOM05D005799 ORTHO05D007150 1.1e-08 64.3 51 62.7
unitig_748.g7543 Utricularia gibba HOM05D005799 ORTHO05D007150 1.8e-08 63.5 37 81.1
Nn3g18897 Nelumbo nucifera HOM05D005799 ORTHO05D007150 2.2e-06 56.6 32 81.2
Mapoly0036s0127 Marchantia polymorpha HOM05D005799 ORTHO05D007150 2.9e-06 56.2 50 54.0
Pp3c1_32590 Physcomitrium patens HOM05D005799 ORTHO05D007150 8.3e-06 54.7 97 36.1


User provided reference genes

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