Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1074.10 Capsicum annuum HOM05D000843 ORTHO05D013550 2.1e-35 151.8 73 100.0
CAN.G52.5 Capsicum annuum HOM05D000843 ORTHO05D013550 5.5e-20 100.5 72 76.4
CAN.G177.20 Capsicum annuum HOM05D000011 ORTHO05D009225 1.6e-19 99.0 70 75.7
CAN.G45.9 Capsicum annuum HOM05D000843 ORTHO05D013550 6.8e-18 93.6 72 70.8
CAN.G363.20 Capsicum annuum HOM05D000843 ORTHO05D013550 2.0e-17 92.0 72 72.2
CAN.G156.13 Capsicum annuum HOM05D000843 ORTHO05D013550 9.2e-15 83.2 52 82.7
CAN.G65.222 Capsicum annuum HOM05D000843 ORTHO05D000698 1.2e-14 82.8 51 82.4
CAN.G613.3 Capsicum annuum HOM05D000843 ORTHO05D013550 5.9e-14 80.5 71 67.6
Sopen06g030130 Solanum pennellii HOM05D000843 ORTHO05D000698 3.3e-12 74.7 49 71.4
Solyc06g073720.3 Solanum lycopersicum HOM05D000843 ORTHO05D000698 7.3e-12 73.6 46 80.4
Sopen06g030120 Solanum pennellii HOM05D000843 ORTHO05D000698 7.3e-12 73.6 46 80.4
Solyc06g073730.2 Solanum lycopersicum HOM05D000843 ORTHO05D000698 1.2e-11 72.8 49 69.4
CAN.G65.223 Capsicum annuum HOM05D000843 ORTHO05D000698 1.6e-11 72.4 49 69.4
Nitab4.5_0000271g0110 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.8e-11 71.6 51 70.6
Nitab4.5_0002184g0030 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.8e-11 71.6 51 70.6
CAN.G864.1 Capsicum annuum HOM05D000843 ORTHO05D000698 8.0e-11 70.1 51 66.7
Dinv25741 Davidia involucrata HOM05D000843 ORTHO05D000698 8.0e-11 70.1 61 62.3
Gohir.A08G196600 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.0e-10 69.7 49 63.3
Gohir.D08G213800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.0e-10 69.7 49 63.3
Gohir.D12G083502 Gossypium hirsutum HOM05D000843 ORTHO05D013550 1.0e-10 69.7 49 63.3
Gorai.001G192700 Gossypium raimondii HOM05D000843 ORTHO05D013550 1.0e-10 69.7 49 63.3
Gorai.004G227800 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.0e-10 69.7 49 63.3
Actinidia22477 Actinidia chinensis HOM05D000843 ORTHO05D000698 1.4e-10 69.3 49 67.3
Nitab4.5_0000271g0090 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.8e-10 68.9 49 67.3
Peaxi162Scf00342g00073 Petunia axillaris HOM05D000843 ORTHO05D000698 1.8e-10 68.9 49 67.3
Nitab4.5_0007649g0020 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.3e-10 68.6 49 69.4
Cc01_g07490 Coffea canephora HOM05D000843 ORTHO05D000698 3.1e-10 68.2 51 62.7
Gohir.D07G172550 Gossypium hirsutum HOM05D000843 ORTHO05D013550 3.1e-10 68.2 49 61.2
Duzib168G1232 Durio zibethinus HOM05D000843 ORTHO05D000698 4.0e-10 67.8 49 61.2
Nitab4.5_0000271g0040 Nicotiana tabacum HOM05D000843 ORTHO05D000698 4.0e-10 67.8 51 64.7
Eucgr.J00631 Eucalyptus grandis HOM05D000843 ORTHO05D000698 5.2e-10 67.4 49 63.3
Glyma.20G051500 Glycine max HOM05D000843 ORTHO05D000698 5.2e-10 67.4 49 63.3
Nitab4.5_0002184g0010 Nicotiana tabacum HOM05D000843 ORTHO05D000698 8.9e-10 66.6 51 62.7
PGSC0003DMG400008712 Solanum tuberosum HOM05D000843 ORTHO05D000698 8.9e-10 66.6 51 64.7
Gorai.013G266300 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.2e-09 66.2 49 63.3
Nitab4.5_0000428g0210 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.2e-09 66.2 51 64.7
Thecc.09G338000 Theobroma cacao HOM05D000843 ORTHO05D000698 1.2e-09 66.2 49 59.2
CSS0042368 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 1.5e-09 65.9 49 65.3
Potri.009G159200 Populus trichocarpa HOM05D000843 ORTHO05D000698 1.5e-09 65.9 49 61.2
Dinv10728 Davidia involucrata HOM05D000843 ORTHO05D000698 2.0e-09 65.5 49 61.2
Duzib150G0618 Durio zibethinus HOM05D000843 ORTHO05D000698 2.0e-09 65.5 49 57.1
Glyma.13G076700 Glycine max HOM05D000843 ORTHO05D000698 2.6e-09 65.1 49 61.2
SalBow6G1804 Salvia bowleyana HOM05D000843 ORTHO05D000698 3.4e-09 64.7 53 66.0
Manes.04G052000 Manihot esculenta HOM05D000843 ORTHO05D000698 4.4e-09 64.3 49 61.2
Actinidia22476 Actinidia chinensis HOM05D000843 ORTHO05D000698 5.8e-09 63.9 49 59.2
Phvul.008G207000 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 5.8e-09 63.9 49 59.2
arahy.Tifrunner.gnm1.ann1.J729H0 Arachis hypogaea HOM05D000843 ORTHO05D000698 7.5e-09 63.5 49 59.2
arahy.Tifrunner.gnm1.ann1.S7XF8N Arachis hypogaea HOM05D000843 ORTHO05D000698 7.5e-09 63.5 49 59.2
Hma1.2p1_0218F.1_g092710 Hydrangea macrophylla HOM05D000843 ORTHO05D000698 7.5e-09 63.5 49 57.1
Sopen01g004640 Solanum pennellii HOM05D000843 ORTHO05D000698 9.8e-09 63.2 51 62.7
PGSC0003DMG400005915 Solanum tuberosum HOM05D000843 ORTHO05D000698 1.3e-08 62.8 48 70.8
Psat2g022320 Pisum sativum HOM05D000843 ORTHO05D000698 2.2e-08 62.0 49 59.2
TPR.G22218 Trifolium pratense HOM05D000843 ORTHO05D000698 2.2e-08 62.0 49 59.2
Gohir.A05G101500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 2.9e-08 61.6 49 55.1
Peaxi162Scf00526g00042 Petunia axillaris HOM05D000843 ORTHO05D000698 2.9e-08 61.6 50 66.0
Sabra09G0124500 Salix brachista HOM05D000843 ORTHO05D000698 2.9e-08 61.6 49 57.1
Ciclev10014617m.g Citrus clementina HOM05D000843 ORTHO05D000698 3.7e-08 61.2 49 55.1
Medtr5g087790 Medicago truncatula HOM05D000843 ORTHO05D000698 3.7e-08 61.2 50 60.0
Oeu022225.1 Olea europaea HOM05D000843 ORTHO05D000698 4.9e-08 60.8 51 60.8
Rhsim01G0196400 Rhododendron simsii HOM05D000843 ORTHO05D000698 4.9e-08 60.8 52 61.5
Sabra04G0133800 Salix brachista HOM05D000843 ORTHO05D000698 4.9e-08 60.8 49 55.1
Solyc01g009170.4 Solanum lycopersicum HOM05D000843 ORTHO05D000698 4.9e-08 60.8 51 60.8
Glyma.02G274600 Glycine max HOM05D000843 ORTHO05D000698 6.4e-08 60.5 49 59.2
Potri.004G197400 Populus trichocarpa HOM05D000843 ORTHO05D000698 6.4e-08 60.5 49 55.1
Ca_22181_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 8.3e-08 60.1 49 59.2
Gohir.D03G133500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 8.3e-08 60.1 56 53.6
Gorai.003G140600 Gossypium raimondii HOM05D000843 ORTHO05D000698 8.3e-08 60.1 56 53.6
Sed0007953 Sechium edule HOM05D000843 ORTHO05D000698 8.3e-08 60.1 49 55.1
PGSC0003DMG400005914 Solanum tuberosum HOM05D000843 ORTHO05D000698 8.3e-08 60.1 43 65.1
ClCG03G014100 Citrullus lanatus HOM05D000843 ORTHO05D000698 1.1e-07 59.7 49 57.1
Duzib170G0752 Durio zibethinus HOM05D000843 ORTHO05D000698 1.1e-07 59.7 49 53.1
Glyma.14G041500 Glycine max HOM05D000843 ORTHO05D000698 1.1e-07 59.7 49 59.2
Oeu032078.1 Olea europaea HOM05D000843 ORTHO05D000698 1.1e-07 59.7 51 58.8
Ca_06157_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 1.4e-07 59.3 49 55.1
Ca_29849_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 1.4e-07 59.3 49 55.1
LjContig00564g0001972 Lotus japonicus HOM05D000843 ORTHO05D000698 1.4e-07 59.3 49 57.1
CsaV3_1G042150 Cucumis sativus L. HOM05D000843 ORTHO05D000698 1.9e-07 58.9 49 55.1
CiPaw.13G120900 Carya illinoinensis HOM05D000843 ORTHO05D000698 2.4e-07 58.5 49 53.1
MSTRG.17663 Avicennia marina HOM05D000843 ORTHO05D000698 3.2e-07 58.2 51 54.9
Cpa.g.sc103.60 Carica papaya HOM05D000843 ORTHO05D000698 4.1e-07 57.8 49 53.1
Oeu048808.1 Olea europaea HOM05D000843 ORTHO05D000698 4.1e-07 57.8 51 56.9
MELO3C015633.2 Cucumis melo HOM05D000843 ORTHO05D000698 5.4e-07 57.4 49 53.1
Lj2C931T8 Lonicera japonica HOM05D000843 ORTHO05D000698 5.4e-07 57.4 49 53.1
Migut.N02421 Erythranthe guttata HOM05D000843 ORTHO05D000698 7.0e-07 57.0 55 50.9
Oeu026661.1 Olea europaea HOM05D000843 ORTHO05D000698 7.0e-07 57.0 51 52.9
TPR.G33784 Trifolium pratense HOM05D000843 ORTHO05D000698 9.2e-07 56.6 49 51.0
FvH4_1g28720 Fragaria vesca HOM05D000843 ORTHO05D000698 1.6e-06 55.8 49 55.1
FvH4_7g04940 Fragaria vesca HOM05D000843 ORTHO05D000698 1.6e-06 55.8 49 53.1
FAN01G0235 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.6e-06 55.8 49 53.1
FAN19G3072 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.6e-06 55.8 49 55.1
FAN23G1867 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.6e-06 55.8 49 55.1
FAN26G0335 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.6e-06 55.8 49 55.1
FAN28G2364 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.6e-06 55.8 49 55.1
Gohir.D05G101300 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.6e-06 55.8 58 46.6
Gorai.009G105400 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.6e-06 55.8 58 46.6
Atru.chr3.2868 Acer truncatum HOM05D000843 ORTHO05D000698 2.0e-06 55.5 49 44.9
Atru.chr3.2880 Acer truncatum HOM05D000843 ORTHO05D000698 2.0e-06 55.5 49 46.9
BcaC05g28283 Brassica carinata HOM05D000843 ORTHO05D000698 2.0e-06 55.5 51 58.8
C05p43310 Brassica napus HOM05D000843 ORTHO05D000698 2.0e-06 55.5 51 58.8
BolC5t33063H Brassica oleracea HOM05D000843 ORTHO05D000698 2.0e-06 55.5 51 58.8
FvH4_7g04852 Fragaria vesca HOM05D000843 ORTHO05D000698 2.7e-06 55.1 47 53.2
FAN06G3294 Fragaria x ananassa HOM05D000843 ORTHO05D013550 2.7e-06 55.1 47 53.2
MD02G1266200 Malus domestica HOM05D000843 ORTHO05D000698 2.7e-06 55.1 49 55.1
SalBow3G0451 Salvia bowleyana HOM05D000843 ORTHO05D000698 2.7e-06 55.1 50 58.0
THA.LOC104826471 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 2.7e-06 55.1 50 54.0
MSTRG.18487 Avicennia marina HOM05D000843 ORTHO05D000698 3.5e-06 54.7 48 58.3
Gohir.A03G034800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 3.5e-06 54.7 51 52.9
Gohir.D08G037301 Gossypium hirsutum HOM05D000843 ORTHO05D013550 3.5e-06 54.7 43 58.1
Potri.008G011300 Populus trichocarpa HOM05D000843 ORTHO05D000698 3.5e-06 54.7 49 51.0
Cfa010264 Carpinus fangiana HOM05D000843 ORTHO05D000698 4.6e-06 54.3 49 51.0
Lj6g0001407 Lotus japonicus HOM05D000843 ORTHO05D000698 4.6e-06 54.3 49 51.0
Phvul.006G011200 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 4.6e-06 54.3 49 51.0
Potri.010G247500 Populus trichocarpa HOM05D000843 ORTHO05D000698 4.6e-06 54.3 49 53.1
CANSAT56G3644 Cannabis sativa HOM05D000843 ORTHO05D000698 6.0e-06 53.9 49 51.0
RcHm_v2.0_Chr1g0331011 Rosa chinensis HOM05D000843 ORTHO05D000698 6.0e-06 53.9 51 56.9
RcHm_v2.0_Chr5g0049961 Rosa chinensis HOM05D000843 ORTHO05D000698 6.0e-06 53.9 49 53.1
FAN01G2732 Fragaria x ananassa HOM05D000843 ORTHO05D013550 7.8e-06 53.5 47 51.1
MD07G1053800 Malus domestica HOM05D000843 ORTHO05D000698 7.8e-06 53.5 49 53.1
QL01p020207 Quercus lobata HOM05D000843 ORTHO05D000698 7.8e-06 53.5 49 51.0
Sc21g0000230 Simmondsia chinensis HOM05D000843 ORTHO05D000698 7.8e-06 53.5 48 52.1


User provided reference genes

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