Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 2.8e-238 828.2 405 100.0
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.1e-221 771.5 405 93.8
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 4.2e-218 761.1 405 92.8
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 3.9e-208 728.0 405 88.6
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.0e-207 725.7 405 87.7
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 2.8e-182 642.1 364 87.1
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.3e-174 616.7 405 73.1
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 3.3e-170 602.1 405 71.9
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 4.3e-170 601.7 405 71.4
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 2.1e-169 599.4 405 71.1
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 3.0e-168 595.5 401 72.3
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 2.0e-167 592.8 406 71.9
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 4.4e-167 591.7 405 70.9
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 5.7e-167 591.3 405 69.6
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 1.3e-166 590.1 408 71.6
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.9e-166 589.0 401 72.3
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 3.7e-166 588.6 405 70.6
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.4e-166 587.8 407 70.3
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 4.1e-165 585.1 405 71.9
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 1.2e-164 583.6 405 70.1
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 1.2e-164 583.6 405 68.9
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.6e-164 583.2 406 69.0
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 3.5e-164 582.0 405 69.9
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 4.6e-164 581.6 405 68.9
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 7.8e-164 580.9 405 70.1
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 1.7e-163 579.7 405 69.9
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 2.3e-163 579.3 408 69.4
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 5.0e-163 578.2 420 69.8
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 5.0e-163 578.2 410 70.5
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 2.5e-162 575.9 406 67.5
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 5.6e-162 574.7 405 69.9
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 5.6e-162 574.7 391 72.9
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 5.6e-162 574.7 408 68.9
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 9.5e-162 573.9 406 67.2
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 1.2e-161 573.5 404 70.0
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 3.6e-161 572.0 407 68.8
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 3.6e-161 572.0 406 69.5
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 4.7e-161 571.6 405 69.6
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 6.2e-161 571.2 405 68.9
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 8.0e-161 570.9 400 69.5
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 1.1e-160 570.5 399 70.9
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 8.9e-160 567.4 406 68.0
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 8.9e-160 567.4 409 68.9
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 3.4e-159 565.5 410 68.0
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 2.2e-158 562.8 405 67.9
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 2.2e-158 562.8 448 63.8
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 3.7e-158 562.0 407 67.8
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 4.9e-158 561.6 408 67.4
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 6.4e-158 561.2 407 68.6
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 6.4e-158 561.2 412 68.4
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 1.9e-157 559.7 418 66.7
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.2e-157 558.9 398 70.1
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 4.1e-157 558.5 407 67.6
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 2.0e-156 556.2 405 67.9
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 2.7e-156 555.8 406 67.2
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 3.5e-156 555.4 412 66.7
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 3.5e-156 555.4 400 67.0
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.3e-155 553.5 410 66.8
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 2.3e-155 552.7 399 66.9
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 2.3e-155 552.7 408 67.6
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 3.0e-155 552.4 410 68.8
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 3.0e-155 552.4 407 67.8
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 8.6e-155 550.8 412 68.0
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 4.3e-154 548.5 409 67.0
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 4.3e-154 548.5 409 67.0
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 1.2e-153 547.0 399 69.4
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.6e-153 546.6 407 67.1
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 2.1e-153 546.2 408 65.7
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 2.1e-153 546.2 414 66.9
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 2.1e-153 546.2 407 67.3
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 1.4e-152 543.5 449 61.7
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 1.8e-152 543.1 405 66.4
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 8.9e-152 540.8 407 66.3
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 1.5e-151 540.0 408 65.0
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 4.4e-151 538.5 408 65.4
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 3.7e-150 535.4 407 65.6
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 4.9e-150 535.0 426 63.8
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 6.4e-150 534.6 408 67.4
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 1.9e-149 533.1 407 65.4
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 1.9e-149 533.1 408 65.7
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.2e-148 530.4 406 66.3
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 2.7e-148 529.3 406 62.6
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 5.1e-147 525.0 407 64.4
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 2.8e-145 519.2 406 64.8
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 6.2e-145 518.1 406 64.8
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 8.1e-145 517.7 405 64.9
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 1.5e-143 513.5 413 63.2
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 2.0e-143 513.1 483 57.3
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 9.9e-143 510.8 430 61.6
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.2e-142 509.6 401 64.3
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 1.4e-141 506.9 367 67.0
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 3.2e-141 505.8 406 61.6
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 2.7e-140 502.7 387 65.6
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 3.0e-139 499.2 406 62.1
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 6.6e-139 498.0 252 93.7
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 1.1e-138 497.3 437 59.3
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 1.1e-138 497.3 437 59.3
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 5.2e-136 488.4 345 69.3
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 5.8e-135 485.0 333 69.1
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 9.3e-133 477.6 405 61.5
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 2.1e-132 476.5 397 60.7
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 3.9e-131 472.2 401 59.9
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 1.9e-130 469.9 399 60.2
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 4.3e-130 468.8 383 61.1
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 7.3e-130 468.0 416 58.4
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 4.8e-129 465.3 402 58.2
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 6.2e-129 464.9 401 61.1
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 3.4e-127 459.1 399 59.4
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 1.9e-122 443.4 398 58.0
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 4.3e-122 442.2 365 60.5
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 5.6e-122 441.8 398 57.8
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 1.1e-120 437.6 390 59.2
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.8e-120 436.8 399 57.4
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.8e-120 436.8 403 57.3
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 5.3e-120 435.3 386 57.3
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 7.6e-119 431.4 404 56.7
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 7.6e-119 431.4 404 56.4
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 1.6e-116 423.7 403 56.6
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.6e-116 423.7 318 64.2
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 2.7e-116 422.9 401 56.1
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 7.9e-116 421.4 404 56.2
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 7.9e-116 421.4 405 55.3
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 2.3e-115 419.9 362 58.8
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 6.7e-115 418.3 403 56.1
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 4.8e-113 412.1 398 55.8
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 1.0e-110 404.4 328 61.3
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 7.4e-106 388.3 406 53.7
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 4.8e-105 385.6 322 60.2
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 4.1e-104 382.5 372 54.6
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 4.1e-104 382.5 372 54.6
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 9.0e-104 381.3 372 54.3
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.9e-101 373.6 263 68.8
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 2.7e-100 369.8 272 62.9
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 3.0e-99 366.3 260 70.0
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 1.7e-97 360.5 359 55.2
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.3e-97 358.6 277 63.2
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 5.3e-96 355.5 394 50.5
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 9.4e-93 344.7 230 70.9
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.2e-92 344.4 339 54.0
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.4e-91 340.9 258 64.7
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 9.7e-90 334.7 340 54.1
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.2e-87 327.8 269 61.7
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 1.0e-86 324.7 396 45.2
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 8.5e-86 321.6 406 44.6
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.9e-83 312.8 156 92.3
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.5e-82 310.8 252 59.9
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 5.0e-78 295.8 406 42.6
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 3.2e-77 293.1 412 40.8
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 8.8e-75 285.0 281 55.2
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 1.2e-71 274.6 364 44.0
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 2.0e-66 257.3 193 63.7
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.2e-58 231.5 453 35.1
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 6.8e-43 179.1 369 36.0
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 3.7e-41 173.3 136 68.4
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 7.8e-39 165.6 129 69.0
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 3.0e-38 163.7 142 62.0
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 3.3e-37 160.2 332 33.1
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 9.5e-37 158.7 126 65.1
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 8.1e-36 155.6 111 64.0
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 8.3e-33 145.6 226 38.9
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.9e-32 144.4 226 38.5
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 5.4e-32 142.9 389 29.3
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.4e-27 127.5 73 89.0
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 1.5e-26 124.8 317 27.1
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 1.6e-23 114.8 68 75.0
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 1.2e-20 105.1 68 73.5
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 4.0e-19 100.1 89 58.4
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.1e-15 87.8 72 61.1
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 4.6e-15 86.7 114 50.0
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 4.5e-10 70.1 137 35.8
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 1.7e-09 68.2 43 74.4
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 1.7e-09 68.2 44 79.5
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.1e-07 61.2 78 47.4


User provided reference genes

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