Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 1.5e-125 453.0 245 100.0
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 9.0e-99 364.0 242 81.0
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 8.5e-97 357.5 243 77.8
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.9e-80 303.1 269 65.4
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.0e-70 270.8 239 61.5
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 5.3e-67 258.5 240 57.5
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 2.7e-66 256.1 237 59.1
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 1.2e-63 247.3 241 54.8
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 4.7e-63 245.4 242 54.1
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.4e-62 243.8 242 54.1
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 1.8e-62 243.4 242 53.7
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 1.8e-62 243.4 240 55.4
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 2.3e-62 243.0 241 54.4
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 1.5e-61 240.4 241 53.1
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 4.8e-60 235.3 239 52.3
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 8.3e-60 234.6 240 53.8
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 1.4e-59 233.8 240 52.5
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 4.1e-59 232.3 239 53.1
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 4.1e-59 232.3 239 53.1
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 5.9e-58 228.4 240 52.5
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 7.7e-58 228.0 239 53.6
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.0e-57 227.6 239 51.0
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 2.9e-57 226.1 242 47.9
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 5.0e-57 225.3 235 54.0
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 5.0e-57 225.3 212 56.6
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 2.5e-56 223.0 240 51.2
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 2.5e-56 223.0 245 51.8
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 4.2e-56 222.2 239 50.6
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 5.5e-56 221.9 240 47.9
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 5.5e-56 221.9 240 49.2
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 2.1e-55 219.9 240 48.3
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 4.7e-55 218.8 245 50.6
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 6.1e-55 218.4 239 51.5
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 8.0e-55 218.0 240 48.3
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 1.8e-54 216.9 240 49.6
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 3.0e-54 216.1 240 49.6
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 4.0e-54 215.7 246 50.0
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 5.2e-54 215.3 239 49.0
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 8.8e-54 214.5 240 47.5
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 1.2e-53 214.2 223 52.5
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.0e-53 213.4 241 49.4
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 5.7e-53 211.8 240 47.1
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 5.7e-53 211.8 240 46.7
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 1.7e-52 210.3 196 58.7
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 4.9e-52 208.8 240 46.2
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 8.3e-52 208.0 240 47.1
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 1.1e-51 207.6 240 46.7
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 1.1e-51 207.6 224 50.9
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.4e-51 207.2 241 49.4
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 4.1e-51 205.7 239 48.5
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 4.1e-51 205.7 239 46.9
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 4.1e-51 205.7 291 43.6
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 5.4e-51 205.3 239 46.4
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.3e-49 200.7 258 43.4
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 2.3e-49 199.9 239 46.9
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 2.3e-49 199.9 238 45.0
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 2.9e-49 199.5 241 46.9
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 6.6e-49 198.4 239 46.4
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 4.3e-48 195.7 240 47.9
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 1.6e-47 193.7 240 45.8
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 4.0e-46 189.1 245 46.5
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 1.5e-45 187.2 239 45.2
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 7.5e-45 184.9 224 44.6
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 9.8e-45 184.5 240 47.1
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 1.7e-44 183.7 189 49.2
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 1.4e-43 180.6 224 43.8
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 1.8e-43 180.3 240 45.4
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 3.2e-43 179.5 251 43.0
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 7.0e-43 178.3 198 51.0
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 5.9e-42 175.3 223 47.1
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 2.3e-41 173.3 241 42.7
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 6.6e-41 171.8 241 44.0
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 8.6e-41 171.4 239 42.3
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 1.5e-40 170.6 240 41.7
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 1.8e-38 163.7 255 42.0
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 4.0e-38 162.5 252 38.9
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 4.0e-38 162.5 241 41.1
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 4.0e-38 162.5 241 41.9
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 1.5e-37 160.6 194 46.9
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.2e-36 156.8 232 42.7
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 1.2e-34 151.0 158 53.8
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.2e-34 151.0 140 55.7
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 4.7e-31 139.0 139 51.8
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 7.5e-29 131.7 240 36.2
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 2.2e-28 130.2 120 56.7
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.9e-28 129.8 120 56.7
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 6.2e-23 112.1 117 52.1
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 1.4e-22 110.9 121 48.8
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 2.6e-21 106.7 170 40.6
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 4.1e-19 99.4 99 57.6
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 5.6e-16 89.0 78 56.4
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 2.1e-15 87.0 122 36.9
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 4.0e-14 82.8 128 39.1
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 1.1e-11 74.7 117 42.7
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 3.9e-09 66.2 239 25.1
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 1.5e-08 64.3 66 48.5
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 2.8e-07 60.1 61 45.9


User provided reference genes

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