Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1062.3 Capsicum annuum HOM05D005534 ORTHO05D006642 2.1e-91 339.0 167 100.0
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 3.8e-32 142.1 164 51.8
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 8.5e-32 141.0 154 52.6
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 1.4e-31 140.2 154 52.6
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 3.2e-31 139.0 154 51.3
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 2.3e-29 132.9 154 50.0
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 8.8e-29 131.0 154 50.0
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 3.2e-23 112.5 141 46.1
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 8.0e-22 107.8 152 44.1
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 1.1e-20 104.0 151 43.7
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 2.6e-20 102.8 141 42.6
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 5.7e-20 101.7 155 42.6
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 7.4e-20 101.3 161 42.9
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 1.7e-19 100.1 144 43.1
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 3.7e-19 99.0 142 40.8
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 6.3e-19 98.2 144 42.4
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 1.1e-18 97.4 144 41.0
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 1.4e-18 97.1 144 42.4
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 2.4e-18 96.3 147 42.9
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 2.4e-18 96.3 157 42.0
Sed0013677 Sechium edule HOM05D005534 ORTHO05D006642 4.1e-18 95.5 162 38.9
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 4.1e-18 95.5 140 42.1
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 1.2e-17 94.0 140 40.7
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 1.6e-17 93.6 151 41.7
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 1.6e-17 93.6 151 41.7
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 2.6e-17 92.8 144 40.3
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 2.6e-17 92.8 151 41.7
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 3.5e-17 92.4 140 40.0
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 4.5e-17 92.0 155 38.7
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 5.9e-17 91.7 148 39.2
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 5.9e-17 91.7 155 38.7
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 1.3e-16 90.5 155 41.3
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 1.3e-16 90.5 154 38.3
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 1.3e-16 90.5 158 39.9
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 1.7e-16 90.1 146 38.4
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 1.7e-16 90.1 166 39.8
Lj1E297T0 Lonicera japonica HOM05D005534 ORTHO05D006642 1.7e-16 90.1 64 70.3
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 2.2e-16 89.7 151 39.7
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 2.9e-16 89.4 155 38.7
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 3.8e-16 89.0 155 39.4
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 8.5e-16 87.8 153 36.6
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 1.1e-15 87.4 137 40.1
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 1.1e-15 87.4 137 40.1
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 1.1e-15 87.4 155 38.1
FAN08G1090 Fragaria x ananassa HOM05D005534 ORTHO05D006642 1.5e-15 87.0 153 35.9
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 1.9e-15 86.7 140 39.3
Lj1A290G37 Lonicera japonica HOM05D005534 ORTHO05D006642 2.5e-15 86.3 54 75.9
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 2.5e-15 86.3 144 39.6
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 3.2e-15 85.9 152 36.2
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 5.5e-15 85.1 142 38.7
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 7.2e-15 84.7 155 34.8
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 7.2e-15 84.7 139 38.1
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 7.2e-15 84.7 139 38.1
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 9.4e-15 84.3 144 37.5
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 1.2e-14 84.0 134 37.3
CANSAT25G1946 Cannabis sativa HOM05D005534 ORTHO05D006642 2.7e-14 82.8 165 37.0
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 2.7e-14 82.8 152 37.5
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 3.6e-14 82.4 153 35.9
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 4.7e-14 82.0 140 38.6
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 6.1e-14 81.6 137 37.2
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 1.0e-13 80.9 137 38.0
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 2.0e-12 76.6 141 34.8
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 3.3e-12 75.9 154 35.7
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 7.5e-12 74.7 151 34.4
unitig_899.g15651 Utricularia gibba HOM05D005534 ORTHO05D006642 7.5e-12 74.7 59 64.4
ATR0681G326 Amborella trichopoda HOM05D005534 ORTHO05D006642 3.7e-11 72.4 133 33.1
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 1.4e-10 70.5 141 36.2
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 3.1e-10 69.3 159 33.3
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 3.1e-10 69.3 159 33.3
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 4.1e-10 68.9 158 35.4
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 4.1e-10 68.9 152 34.9
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 4.1e-10 68.9 158 34.2
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 5.3e-10 68.6 149 36.2
HPP92_005611 Vanilla planifolia HOM05D000010 ORTHO05D429468 5.3e-10 68.6 67 55.2
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 7.0e-10 68.2 130 35.4
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 7.0e-10 68.2 174 32.2
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 9.1e-10 67.8 129 35.7
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 9.1e-10 67.8 140 32.9
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 1.2e-09 67.4 159 33.3
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 1.2e-09 67.4 159 34.6
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 1.2e-09 67.4 129 35.7
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 1.2e-09 67.4 128 35.9
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 1.2e-09 67.4 158 34.8
SEGI_02632 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 1.6e-09 67.0 126 35.7
C05p21900 Brassica napus HOM05D005534 ORTHO05D006642 2.0e-09 66.6 159 32.7
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 2.7e-09 66.2 87 48.3
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 2.7e-09 66.2 87 48.3
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 2.7e-09 66.2 78 52.6
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 3.5e-09 65.9 133 34.6
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 5.9e-09 65.1 159 32.7
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 5.9e-09 65.1 149 34.9
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 7.7e-09 64.7 55 61.8
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 7.7e-09 64.7 141 34.0
TPR.G30727 Trifolium pratense HOM05D005534 ORTHO05D006642 1.0e-08 64.3 72 48.6
Os12g0203100 Oryza sativa ssp. japonica HOM05D005534 ORTHO05D006642 1.7e-08 63.5 138 32.6
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 8.5e-08 61.2 126 34.1
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 8.5e-08 61.2 126 34.1
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 7.2e-07 58.2 115 33.9
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 3.6e-06 55.8 118 32.2
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 4.7e-06 55.5 132 31.1


User provided reference genes

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