Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 3.0e-38 161.4 82 100.0
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 1.7e-25 119.0 60 100.0
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.7e-25 119.0 60 100.0
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.7e-25 119.0 60 100.0
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.7e-25 119.0 60 100.0
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.7e-25 119.0 60 100.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.7e-25 119.0 60 100.0
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 4.9e-25 117.5 60 98.3
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 4.9e-25 117.5 60 98.3
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 1.4e-24 115.9 60 98.3
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 1.9e-24 115.5 58 100.0
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 1.9e-24 115.5 60 96.7
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 1.9e-24 115.5 60 96.7
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 1.9e-24 115.5 60 96.7
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 1.9e-24 115.5 60 96.7
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.9e-24 115.5 58 100.0
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 1.9e-24 115.5 58 100.0
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 1.9e-24 115.5 60 96.7
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 3.2e-24 114.8 60 96.7
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 5.4e-24 114.0 60 96.7
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 5.4e-24 114.0 59 96.6
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 7.1e-24 113.6 58 98.3
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 7.1e-24 113.6 58 98.3
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 7.1e-24 113.6 58 98.3
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 7.1e-24 113.6 60 95.0
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.2e-23 112.8 60 95.0
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 2.7e-23 111.7 57 98.2
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 4.6e-23 110.9 58 96.6
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 4.6e-23 110.9 58 96.6
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 4.6e-23 110.9 58 96.6
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 6.0e-23 110.5 58 96.6
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 1.0e-22 109.8 58 94.8
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.3e-22 109.4 55 100.0
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 1.3e-22 109.4 55 100.0
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 1.8e-22 109.0 56 98.2
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 5.1e-22 107.5 55 98.2
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.5e-21 105.9 60 90.0
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.9e-21 105.5 60 91.7
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 1.9e-21 105.5 69 79.7
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 5.6e-21 104.0 56 94.6
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 5.6e-21 104.0 56 92.9
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 7.4e-21 103.6 53 98.1
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 9.6e-21 103.2 77 72.7
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 1.3e-20 102.8 55 92.7
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.6e-20 102.4 60 86.7
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.6e-20 102.4 60 90.0
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 3.7e-20 101.3 53 96.2
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 4.8e-20 100.9 56 89.3
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.8e-20 100.9 54 94.4
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 6.2e-20 100.5 53 96.2
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 6.2e-20 100.5 53 94.3
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.4e-19 99.4 58 87.9
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.3e-19 97.4 54 88.9
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 2.7e-15 85.1 43 97.7
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.1e-11 73.2 43 86.0
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 5.8e-10 67.4 45 75.6
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 5.8e-10 67.4 45 75.6
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 1.3e-09 66.2 36 88.9
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 2.9e-09 65.1 31 100.0
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 2.9e-09 65.1 31 100.0
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.0e-09 64.3 33 93.9
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 2.5e-08 62.0 46 71.7
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 1.2e-07 59.7 37 81.1
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 1.8e-06 55.8 28 89.3


User provided reference genes

Program Settings