Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1055.6 Capsicum annuum HOM05D003888 ORTHO05D007163 1.7e-35 152.1 76 100.0
CAN.G380.8 Capsicum annuum HOM05D003888 ORTHO05D007163 4.6e-25 117.5 73 82.2
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 2.1e-22 108.6 71 77.5
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 7.5e-20 100.1 70 72.9
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 1.3e-19 99.4 70 70.0
CAN.G634.4 Capsicum annuum HOM05D003888 ORTHO05D007163 1.3e-19 99.4 71 71.8
CAN.G59.26 Capsicum annuum HOM05D003888 ORTHO05D007163 2.2e-19 98.6 68 73.5
PGSC0003DMG400041412 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.7e-19 97.8 71 71.8
PGSC0003DMG400044443 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-18 95.9 71 67.6
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 2.4e-18 95.1 68 70.6
CAN.G1172.11 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-17 92.8 61 72.1
PGSC0003DMG400038980 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-17 91.7 61 75.4
PGSC0003DMG400047283 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-17 90.5 60 73.3
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.3e-16 89.4 68 66.2
PGSC0003DMG400036776 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-16 89.0 61 73.8
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.7e-16 89.0 59 74.6
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-16 88.6 59 74.6
PGSC0003DMG400035178 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-16 87.4 59 74.6
PGSC0003DMG400043596 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.6e-16 87.0 61 73.8
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-15 86.3 61 72.1
Solyc10g052870.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.5e-15 85.1 67 65.7
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 4.3e-15 84.3 59 72.9
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-15 84.0 61 63.9
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.6e-15 84.0 59 72.9
PGSC0003DMG400019003 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.5e-15 83.2 53 79.2
PGSC0003DMG400019004 Solanum tuberosum HOM05D003888 ORTHO05D007163 9.5e-15 83.2 53 79.2
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-14 82.8 61 68.9
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 1.6e-14 82.4 71 60.6
CAN.G176.21 Capsicum annuum HOM05D003888 ORTHO05D007163 3.6e-14 81.3 63 66.7
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 4.7e-14 80.9 61 60.7
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 6.2e-14 80.5 61 60.7
CAN.G171.3 Capsicum annuum HOM05D003888 ORTHO05D007163 8.1e-14 80.1 61 63.9
PGSC0003DMG400041034 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.1e-13 79.7 61 67.2
PGSC0003DMG400034794 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.4e-13 79.3 59 71.2
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.4e-13 78.6 59 67.8
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 2.4e-13 78.6 61 67.2
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-13 78.2 61 67.2
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 3.1e-13 78.2 57 68.4
PGSC0003DMG400047292 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-13 78.2 71 59.2
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.0e-13 77.8 61 60.7
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.0e-13 77.8 60 63.3
PGSC0003DMG400045139 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-12 76.3 59 67.8
PGSC0003DMG400013128 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-12 75.9 54 74.1
PGSC0003DMG400042993 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.5e-12 75.9 61 65.6
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 3.8e-11 71.2 61 62.3
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.9e-11 70.9 65 56.9
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.4e-11 70.1 61 49.2
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-10 68.9 57 50.9
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.2e-10 68.2 57 45.6
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-10 67.0 57 49.1
PGSC0003DMG400037215 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-10 67.0 56 50.0
PGSC0003DMG400039058 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.1e-10 67.0 57 50.9
Solyc07g017903.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-09 66.2 44 68.2
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.2e-09 66.2 61 45.9
Sopen12g014930 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-09 65.9 59 47.5
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.1e-09 65.5 56 51.8
Solyc12g035290.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.7e-09 65.1 61 45.9
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.7e-09 65.1 54 50.0
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-09 64.3 71 42.3
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.6e-09 64.3 57 45.6
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-09 63.9 51 52.9
PGSC0003DMG400044731 Solanum tuberosum HOM05D003888 ORTHO05D007163 6.0e-09 63.9 57 47.4
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.8e-09 63.5 61 44.3
PGSC0003DMG400037082 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-08 62.0 50 68.0
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-08 61.6 65 43.1
Solyc05g150111.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.6e-08 60.5 54 68.5
Solyc03g065230.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.7e-08 60.1 61 45.9
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-07 58.9 74 39.2
Nitab4.5_0000013g0370 Nicotiana tabacum HOM05D003888 ORTHO05D007163 1.9e-07 58.9 57 45.6
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 2.5e-07 58.5 72 40.3
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 2.5e-07 58.5 57 43.9
Peaxi162Scf00158g00046 Petunia axillaris HOM05D003888 ORTHO05D007163 3.3e-07 58.2 61 44.3
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-07 58.2 44 59.1
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-07 57.8 74 37.8
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-07 57.8 65 40.0
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 5.6e-07 57.4 74 37.8
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 5.6e-07 57.4 60 43.3
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 5.6e-07 57.4 74 37.8
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 7.3e-07 57.0 74 39.2
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-07 56.6 74 37.8
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-07 56.6 74 37.8
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-07 56.6 74 37.8
EL10Ac8g19587 Beta vulgaris HOM05D003888 ORTHO05D007163 9.6e-07 56.6 74 37.8
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 9.6e-07 56.6 74 37.8
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 9.6e-07 56.6 51 47.1
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 9.6e-07 56.6 51 47.1
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-06 56.2 57 43.9
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-06 56.2 57 43.9
Solyc05g025770.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-06 56.2 71 39.4
Solyc10g052840.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 1.2e-06 56.2 41 63.4
Nitab4.5_0012229g0010 Nicotiana tabacum HOM05D003888 ORTHO05D007163 2.1e-06 55.5 50 50.0
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 2.8e-06 55.1 69 37.7
Hund00757 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.8e-06 55.1 61 45.9
PGSC0003DMG400035226 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.7e-06 54.3 48 60.4
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 8.1e-06 53.5 74 36.5
EL10Ac5g11836 Beta vulgaris HOM05D000107 ORTHO05D000062 8.1e-06 53.5 57 40.4
Solyc07g026860.4 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.1e-06 53.5 41 53.7
Sopen07g014660 Solanum pennellii HOM05D003888 ORTHO05D007163 8.1e-06 53.5 41 53.7


User provided reference genes

Program Settings