Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1047.3 Capsicum annuum HOM05D028918 ORTHO05D028454 5.3e-75 284.3 143 100.0
Solyc10g084340.2 Solanum lycopersicum HOM05D000138 ORTHO05D000078 1.2e-23 113.6 126 58.7
Sopen10g033790 Solanum pennellii HOM05D000138 ORTHO05D000078 1.2e-23 113.6 126 58.7
PGSC0003DMG400011046 Solanum tuberosum HOM05D000138 ORTHO05D000078 4.0e-22 108.6 113 60.2
CAN.G1450.1 Capsicum annuum HOM05D028918 ORTHO05D028454 1.0e-17 94.0 69 73.9
Nitab4.5_0000848g0220 Nicotiana tabacum HOM05D000138 ORTHO05D000078 5.6e-16 88.2 132 50.0
Nitab4.5_0006152g0040 Nicotiana tabacum HOM05D000138 ORTHO05D000078 4.0e-14 82.0 142 44.4
PGSC0003DMG400027904 Solanum tuberosum HOM05D000138 ORTHO05D000078 7.8e-10 67.8 137 47.4
Sopen09g002130 Solanum pennellii HOM05D000138 ORTHO05D000078 1.0e-09 67.4 137 46.7
Sopen09g002150 Solanum pennellii HOM05D000138 ORTHO05D000078 1.0e-09 67.4 137 46.7
Solyc09g007260.4 Solanum lycopersicum HOM05D000138 ORTHO05D000078 1.3e-09 67.0 138 46.4
CAN.G1427.16 Capsicum annuum HOM05D000138 ORTHO05D000078 3.3e-08 62.4 41 78.0
Lj2A106T34 Lonicera japonica HOM05D000138 ORTHO05D000078 1.2e-07 60.5 131 41.2
CSS0004391 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 1.6e-07 60.1 145 39.3
MSTRG.10295 Avicennia marina HOM05D000138 ORTHO05D000078 8.1e-07 57.8 118 42.4
Nitab4.5_0000202g0480 Nicotiana tabacum HOM05D000138 ORTHO05D000078 8.1e-07 57.8 112 44.6
Dinv37243 Davidia involucrata HOM05D000138 ORTHO05D000078 1.1e-06 57.4 144 43.1
SalBow4G2295 Salvia bowleyana HOM05D000138 ORTHO05D000078 4.0e-06 55.5 132 40.2
DCAR_002494 Daucus carota HOM05D000138 ORTHO05D000078 5.2e-06 55.1 116 38.8


User provided reference genes

Program Settings