Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1045.8 Capsicum annuum HOM05D001070 ORTHO05D002096 9.3e-56 220.7 184 100.0
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 2.5e-45 186.0 170 75.3
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-41 173.3 172 60.5
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-41 173.3 172 60.5
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.7e-41 173.3 172 60.5
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-41 173.3 172 60.5
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-41 173.3 172 60.5
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-41 173.3 172 60.5
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.7e-41 173.3 172 60.5
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 1.7e-41 173.3 172 60.5
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 7.1e-40 167.9 172 58.7
CAN.G134.9 Capsicum annuum HOM05D001070 ORTHO05D002096 7.9e-39 164.5 152 100.0
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.4e-35 153.7 172 55.2
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.5e-34 150.2 177 53.1
Solyc11g044680.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.5e-34 150.2 172 54.7
CAN.G100.34 Capsicum annuum HOM05D001200 ORTHO05D002731 3.4e-34 149.1 152 71.1
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 8.4e-33 144.4 162 77.8
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 2.5e-32 142.9 155 56.1
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 7.2e-32 141.4 150 57.3
Nitab4.5_0002628g0020 Nicotiana tabacum HOM05D001070 ORTHO05D002096 3.3e-29 132.5 158 51.9
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 1.2e-26 124.0 295 54.9
Solyc12g036550.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.5e-26 123.6 141 56.0
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 5.9e-26 121.7 171 49.1
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 7.7e-26 121.3 138 54.3
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 1.4e-24 117.1 182 45.1
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 5.5e-24 115.2 135 52.6
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 5.5e-24 115.2 135 52.6
Peaxi162Scf00338g00618 Petunia axillaris HOM05D001070 ORTHO05D002096 6.1e-23 111.7 147 49.7
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 4.3e-21 105.5 152 49.3
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 4.3e-21 105.5 152 49.3
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 4.3e-21 105.5 183 45.4
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 4.3e-21 105.5 183 45.4
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.3e-20 104.0 81 71.6
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.4e-19 100.5 82 69.5
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 4.5e-18 95.5 183 42.1
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 3.8e-17 92.4 183 41.0
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 2.5e-16 89.7 175 41.7
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.5e-16 88.6 152 50.7
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
Ciclev10013999m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 1.4e-14 84.0 176 40.9
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 3.0e-14 82.8 175 50.9
Potri.002G008176 Populus trichocarpa HOM05D001070 ORTHO05D002096 3.9e-14 82.4 81 63.0
CARHR282400 Cardamine hirsuta HOM05D001070 ORTHO05D002096 6.7e-14 81.6 156 42.9
CAN.G1298.17 Capsicum annuum HOM05D001070 ORTHO05D004271 8.8e-14 81.3 65 98.5
Sabra06G0005100 Salix brachista HOM05D001711 ORTHO05D002847 1.1e-13 80.9 77 62.3
AL7G50370 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 2.6e-13 79.7 183 39.9
C09p25530 Brassica napus HOM05D001070 ORTHO05D002096 6.3e-12 75.1 174 39.1
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 6.3e-12 75.1 77 71.4
PSO541G0682 Papaver somniferum HOM05D001070 ORTHO05D002096 6.3e-12 75.1 77 71.4
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 6.3e-12 75.1 77 71.4
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 8.2e-12 74.7 187 37.4
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 8.2e-12 74.7 176 43.8
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-11 74.3 187 36.9
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 2.4e-11 73.2 81 56.8
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 2.4e-11 73.2 81 56.8
BolSC46t60964H Brassica oleracea HOM05D001070 ORTHO05D002096 4.1e-11 72.4 174 37.9
RcHm_v2.0_Chr4g0392791 Rosa chinensis HOM05D001070 ORTHO05D002096 4.1e-11 72.4 81 76.5
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.3e-11 72.0 81 56.8
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 5.3e-11 72.0 81 56.8
BolSC29t60500H Brassica oleracea HOM05D001070 ORTHO05D002096 7.0e-11 71.6 186 36.6
BolSC29t60623H Brassica oleracea HOM05D001070 ORTHO05D002096 7.0e-11 71.6 186 36.6
Nitab4.5_0000172g2260 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.6e-10 70.5 51 74.5
BraSC138t45540Z Brassica rapa HOM05D001070 ORTHO05D002096 2.6e-10 69.7 82 52.4
Solyc02g011860.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-10 69.7 61 62.3
Solyc08g043160.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-10 69.7 70 61.4
BolSC35t60698H Brassica oleracea HOM05D001070 ORTHO05D002096 1.0e-09 67.8 76 53.9
BolSC44t60817H Brassica oleracea HOM05D001070 ORTHO05D002096 1.0e-09 67.8 76 53.9
BolSC44t60828H Brassica oleracea HOM05D001070 ORTHO05D002096 1.0e-09 67.8 76 53.9
BolSC45t60915H Brassica oleracea HOM05D001070 ORTHO05D002096 1.0e-09 67.8 76 53.9
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 5.0e-09 65.5 153 39.2
Gohir.D03G074712 Gossypium hirsutum HOM05D001070 ORTHO05D002096 5.0e-09 65.5 142 39.4
BraSC138t45529Z Brassica rapa HOM05D001070 ORTHO05D002096 6.5e-09 65.1 174 36.8
ClCG11G009270 Citrullus lanatus HOM05D001070 ORTHO05D002096 1.5e-08 63.9 137 49.6
EL10Ac4g08269 Beta vulgaris HOM05D001070 ORTHO05D002096 4.2e-08 62.4 81 51.9
Gohir.1Z049492 Gossypium hirsutum HOM05D001070 ORTHO05D002096 7.2e-08 61.6 81 54.3
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 7.2e-08 61.6 67 52.2
Nitab4.5_0004137g0050 Nicotiana tabacum HOM05D001070 ORTHO05D002096 7.2e-08 61.6 32 93.8
Sed0002593 Sechium edule HOM05D001070 ORTHO05D002096 9.4e-08 61.2 133 48.9
Sed0025207 Sechium edule HOM05D001070 ORTHO05D002096 9.4e-08 61.2 133 48.9
A04p09360 Brassica napus HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
BolSC28t60312H Brassica oleracea HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
BolSC28t60368H Brassica oleracea HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
BraSC159t45727Z Brassica rapa HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
BraSC48t46237Z Brassica rapa HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
BraSC54t46367Z Brassica rapa HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
Gohir.1Z050666 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
Gohir.A09G046100 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.2e-07 60.8 30 100.0
Migut.D01388 Erythranthe guttata HOM05D001070 ORTHO05D002096 3.6e-07 59.3 30 96.7
PGR081G0002 Punica granatum HOM05D001070 ORTHO05D002096 3.6e-07 59.3 31 93.5
BolSC35t60697H Brassica oleracea HOM05D001070 ORTHO05D002096 4.7e-07 58.9 31 90.3
BraSC103t45423Z Brassica rapa HOM05D001070 ORTHO05D002096 4.7e-07 58.9 31 90.3
Gohir.A10G117450 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.7e-07 58.9 30 93.3
Nn031s41609 Nelumbo nucifera HOM05D001070 ORTHO05D002096 6.1e-07 58.5 31 90.3
Nn064s42217 Nelumbo nucifera HOM05D001070 ORTHO05D002096 6.1e-07 58.5 31 90.3
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 6.1e-07 58.5 31 90.3
Nn212s45207 Nelumbo nucifera HOM05D001070 ORTHO05D002096 6.1e-07 58.5 31 90.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 6.1e-07 58.5 31 90.3
Peaxi162Scf00629g00021 Petunia axillaris HOM05D001032 ORTHO05D000907 8.0e-07 58.2 45 64.4
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 1.4e-06 57.4 90 42.2
TAR626G0349 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.8e-06 57.0 137 43.8
Nitab4.5_0001152g0850 Nicotiana tabacum HOM05D011856 ORTHO05D013014 3.0e-06 56.2 29 89.7
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 5.2e-06 55.5 170 34.7
Gohir.A04G057652 Gossypium hirsutum HOM05D001070 ORTHO05D002096 5.2e-06 55.5 136 38.2
TAR624G0722 Trochodendron aralioides HOM05D001070 ORTHO05D002096 5.2e-06 55.5 134 44.0
Lju5009P0T27 Lonicera japonica HOM05D001070 ORTHO05D002096 8.8e-06 54.7 30 83.3
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 8.8e-06 54.7 159 39.0


User provided reference genes

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