Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1044.9 Capsicum annuum HOM05D004165 ORTHO05D005063 0.0e+00 1862.4 922 100.0
Sopen04g022920 Solanum pennellii HOM05D004165 ORTHO05D005063 0.0e+00 1280.4 889 74.9
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 0.0e+00 1203.3 787 77.1
Nitab4.5_0009050g0010 Nicotiana tabacum HOM05D004165 ORTHO05D005063 0.0e+00 1200.3 891 70.4
Peaxi162Scf00702g00617 Petunia axillaris HOM05D004165 ORTHO05D005063 0.0e+00 1139.8 913 65.8
Dinv21242 Davidia involucrata HOM05D004165 ORTHO05D005063 2.5e-173 613.6 829 43.5
CSS0013219 Camellia sinensis var. sinensis HOM05D004165 ORTHO05D005063 3.6e-164 583.2 838 40.9
vmacro12886 Vaccinium macrocarpon HOM05D004165 ORTHO05D005063 1.1e-154 551.6 822 40.3
Lj4C863G6 Lonicera japonica HOM05D004165 ORTHO05D005063 9.7e-154 548.5 779 40.9
Cc07_g16560 Coffea canephora HOM05D004165 ORTHO05D005063 1.8e-152 544.3 819 41.3
TAR628G1404 Trochodendron aralioides HOM05D004165 ORTHO05D005063 4.1e-144 516.5 852 38.4
QL06p031599 Quercus lobata HOM05D004165 ORTHO05D005063 5.9e-143 512.7 830 38.9
Actinidia28449 Actinidia chinensis HOM05D004165 ORTHO05D005063 7.7e-143 512.3 793 39.3
Haze_25071 Corylus avellana HOM05D004165 ORTHO05D005063 2.7e-140 503.8 827 38.6
Thecc.01G115900 Theobroma cacao HOM05D004165 ORTHO05D005063 4.0e-139 500.0 826 36.3
Prupe.6G168600 Prunus persica HOM05D004165 ORTHO05D005063 2.6e-138 497.3 821 37.5
Cfa002775 Carpinus fangiana HOM05D004165 ORTHO05D005063 4.9e-137 493.0 816 38.5
Atru.chr4.460 Acer truncatum HOM05D004165 ORTHO05D005063 1.1e-136 491.9 835 36.8
Duzib147G0774 Durio zibethinus HOM05D004165 ORTHO05D005063 1.1e-136 491.9 822 36.9
CiPaw.03G132500 Carya illinoinensis HOM05D004165 ORTHO05D005063 7.7e-135 485.7 829 37.8
Nn5g28841 Nelumbo nucifera HOM05D004165 ORTHO05D005063 6.6e-134 482.6 834 38.1
MSTRG.23305 Avicennia marina HOM05D004165 ORTHO05D005063 7.2e-133 479.2 793 38.7
Gorai.008G100800 Gossypium raimondii HOM05D004165 ORTHO05D005063 1.2e-132 478.4 812 36.5
Gohir.D12G093100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 1.0e-131 475.3 812 36.3
COL.COLO4_22365 Corchorus olitorius HOM05D004165 ORTHO05D005063 5.2e-131 473.0 814 36.2
Gohir.A12G083100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 6.8e-131 472.6 813 36.0
FAN26G2965 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.5e-130 471.5 823 36.5
Dinv05635 Davidia involucrata HOM05D004165 ORTHO05D005063 2.6e-130 470.7 805 37.5
Manes.12G144600 Manihot esculenta HOM05D004165 ORTHO05D005063 5.7e-130 469.5 794 36.9
FAN19G2841 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.7e-129 468.0 823 36.3
Ciclev10024679m.g Citrus clementina HOM05D004165 ORTHO05D005063 1.8e-128 464.5 821 36.3
FvH4_1g23050 Fragaria vesca HOM05D004165 ORTHO05D005063 1.8e-128 464.5 823 36.2
Potri.007G078650 Populus trichocarpa HOM05D004165 ORTHO05D005063 1.0e-126 458.8 807 34.7
FAN28G2110 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.7e-126 458.0 823 36.0
Potri.005G086100 Populus trichocarpa HOM05D004165 ORTHO05D005063 1.7e-126 458.0 808 34.8
Sabra05G0071000 Salix brachista HOM05D004165 ORTHO05D005063 1.7e-126 458.0 809 35.6
Migut.H02450 Erythranthe guttata HOM05D004165 ORTHO05D005063 2.9e-126 457.2 800 37.8
FAN23G0468 Fragaria x ananassa HOM05D004165 ORTHO05D005063 1.1e-125 455.3 822 35.2
SalBow6G1439 Salvia bowleyana HOM05D004165 ORTHO05D005063 1.1e-125 455.3 794 37.2
RcHm_v2.0_Chr2g0117761 Rosa chinensis HOM05D004165 ORTHO05D005063 5.2e-123 446.4 821 34.8
MBI01_g36155_MAGBIO Magnolia biondii HOM05D004165 ORTHO05D005063 7.0e-120 436.0 823 36.6
MD15G1330600 Malus domestica HOM05D004165 ORTHO05D005063 7.0e-120 436.0 827 34.9
PGR004G2408 Punica granatum HOM05D004165 ORTHO05D005063 1.2e-119 435.3 817 36.0
SGA_v2.0_scaffold2G01283 Striga asiatica HOM05D004165 ORTHO05D005063 3.9e-118 430.3 795 36.4
Glyma.08G143200 Glycine max HOM05D004165 ORTHO05D005063 2.5e-117 427.6 835 35.0
Sc03g0004750 Simmondsia chinensis HOM05D004165 ORTHO05D005063 2.5e-117 427.6 802 34.7
Lj4g0014922 Lotus japonicus HOM05D004165 ORTHO05D005063 7.3e-117 426.0 832 35.3
DCAR_016673 Daucus carota HOM05D004165 ORTHO05D005063 9.5e-117 425.6 805 35.4
Ca_17683_v3 Cicer arietinum L. HOM05D004165 ORTHO05D005063 2.1e-116 424.5 931 33.3
Oeu054941.1 Olea europaea HOM05D004165 ORTHO05D005063 2.3e-115 421.0 896 33.3
Solyc04g051570.4 Solanum lycopersicum HOM05D004165 ORTHO05D005063 5.2e-115 419.9 340 64.4
HanXRQChr08g0218061 Helianthus annuus HOM05D004165 ORTHO05D005063 7.5e-114 416.0 811 32.6
GSVIVG01022257001 Vitis vinifera HOM05D004165 ORTHO05D005063 1.1e-112 412.1 785 33.5
Phvul.002G266300 Phaseolus vulgaris HOM05D004165 ORTHO05D005063 3.2e-112 410.6 826 33.4
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea HOM05D004165 ORTHO05D005063 1.2e-111 408.7 824 34.2
Lalb_Chr13g0296271 Lupinus albus HOM05D004165 ORTHO05D005063 4.6e-111 406.8 877 33.2
VMungo0251G0498 Vigna mungo HOM05D004165 ORTHO05D005063 6.0e-111 406.4 810 34.3
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 1.0e-110 405.6 822 34.3
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea HOM05D004165 ORTHO05D005063 3.0e-110 404.1 824 34.8
Psat7g050200 Pisum sativum HOM05D004165 ORTHO05D005063 1.1e-109 402.1 835 33.2
TPR.G2323 Trifolium pratense HOM05D004165 ORTHO05D005063 2.1e-108 397.9 839 33.4
Aqoxy5G02023 Aquilegia oxysepala HOM05D004165 ORTHO05D005063 2.8e-108 397.5 811 34.8
AUR62003622 Chenopodium quinoa HOM05D004165 ORTHO05D005063 3.6e-108 397.1 800 33.9
Lsat_1_v5_gn_9_57180 Lactuca sativa HOM05D004165 ORTHO05D005063 4.7e-108 396.7 777 34.0
CANSAT01G1143 Cannabis sativa HOM05D004165 ORTHO05D005063 8.1e-108 396.0 832 33.7
TPR.G2248 Trifolium pratense HOM05D004165 ORTHO05D005063 5.2e-107 393.3 838 33.5
CsaV3_6G042210 Cucumis sativus L. HOM05D004165 ORTHO05D005063 1.5e-106 391.7 823 32.8
EL10Ac6g15255 Beta vulgaris HOM05D004165 ORTHO05D005063 9.9e-106 389.0 811 32.8
ClCG01G015940 Citrullus lanatus HOM05D004165 ORTHO05D005063 1.7e-105 388.3 828 32.4
PSO210G1143 Papaver somniferum HOM05D004165 ORTHO05D005063 1.7e-105 388.3 821 33.3
Medtr8g092100 Medicago truncatula HOM05D004165 ORTHO05D005063 2.9e-105 387.5 819 31.5
AT4G39420 Arabidopsis thaliana HOM05D004165 ORTHO05D005063 4.9e-105 386.7 819 32.7
AUR62017931 Chenopodium quinoa HOM05D004165 ORTHO05D005063 1.9e-104 384.8 831 32.9
Sed0015867 Sechium edule HOM05D004165 ORTHO05D005063 1.2e-103 382.1 827 32.8
Aa31LG6G15850 Aethionema arabicum HOM05D004165 ORTHO05D005063 1.0e-102 379.0 926 30.6
THA.LOC104804480 Tarenaya hassleriana HOM05D004165 ORTHO05D005063 3.9e-102 377.1 826 30.3
C01p00530 Brassica napus HOM05D004165 ORTHO05D005063 6.6e-102 376.3 786 32.6
ECA233G2130 Erigeron canadensis HOM05D004165 ORTHO05D005063 1.5e-101 375.2 657 33.3
Thhalv10024179m.g Eutrema salsugineum HOM05D004165 ORTHO05D005063 1.9e-101 374.8 812 32.5
AL7G11450 Arabidopsis lyrata HOM05D004165 ORTHO05D005063 2.5e-101 374.4 817 32.1
A01p00380 Brassica napus HOM05D004165 ORTHO05D005063 3.3e-101 374.0 787 32.1
PSO170G0015 Papaver somniferum HOM05D004165 ORTHO05D005063 3.3e-101 374.0 819 32.4
BraA01t00046Z Brassica rapa HOM05D004165 ORTHO05D005063 4.3e-101 373.6 787 32.1
Oeu054940.1 Olea europaea HOM05D004165 ORTHO05D005063 4.3e-101 373.6 660 37.3
CARHR247290 Cardamine hirsuta HOM05D004165 ORTHO05D005063 7.3e-101 372.9 831 32.6
MELO3C007461.2 Cucumis melo HOM05D004165 ORTHO05D005063 2.1e-100 371.3 826 32.2
Sp7g36440 Schrenkiella parvula HOM05D004165 ORTHO05D005063 2.1e-100 371.3 821 32.4
BolC1t00056H Brassica oleracea HOM05D004165 ORTHO05D005063 3.6e-100 370.5 793 31.7
Carub.0007s0134 Capsella rubella HOM05D004165 ORTHO05D005063 2.6e-98 364.4 832 31.6
SHI11781 Sapria himalayana HOM05D004165 ORTHO05D005063 8.4e-89 332.8 874 30.5
CDE07G1151 Ceratophyllum demersum HOM05D004165 ORTHO05D005063 1.4e-75 288.9 822 28.1
Glyma.05G185300 Glycine max HOM05D004165 ORTHO05D005063 2.1e-68 265.0 433 37.2
TAR629G2775 Trochodendron aralioides HOM05D004165 ORTHO05D005063 1.3e-62 245.7 781 27.1
Zm00001eb062420 Zea mays HOM05D004165 ORTHO05D005063 9.7e-61 239.6 795 25.9
Os01g0182832 Oryza sativa ssp. japonica HOM05D004165 ORTHO05D005063 6.9e-59 233.4 680 27.2
HPP92_013326 Vanilla planifolia HOM05D004165 ORTHO05D005063 2.0e-58 231.9 814 25.6
SEGI_28346 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 2.7e-55 221.5 934 25.1
SEGI_01323 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 7.0e-35 153.7 604 24.3
Mapoly0066s0021 Marchantia polymorpha HOM05D004165 ORTHO05D005063 3.5e-26 124.8 806 21.5
Pp3c7_14700 Physcomitrium patens HOM05D004165 ORTHO05D005063 2.7e-23 115.2 984 21.8
Pp3c3_30110 Physcomitrium patens HOM05D004165 ORTHO05D005063 3.0e-22 111.7 718 22.3
Pp3c10_13600 Physcomitrium patens HOM05D004165 ORTHO05D005063 2.9e-17 95.1 735 20.7
Cpa.g.c46795 Carica papaya HOM05D004165 ORTHO05D005063 4.4e-13 81.3 58 67.2
Lsat_1_v5_gn_1_66781 Lactuca sativa HOM05D000921 ORTHO05D002852 2.2e-12 79.0 148 31.1
Lsat_1_v5_gn_3_81660 Lactuca sativa HOM05D000921 ORTHO05D002852 3.7e-12 78.2 58 63.8
Lsat_1_v5_gn_9_124480 Lactuca sativa HOM05D001159 ORTHO05D001712 3.7e-12 78.2 58 62.1
AagrBONN_evm.TU.Sc2ySwM_344.5500 Anthoceros agrestis HOM05D004165 ORTHO05D005063 8.0e-07 60.5 309 22.7


User provided reference genes

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