Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1041.18 Capsicum annuum HOM05D000301 ORTHO05D010895 5.7e-49 197.2 96 100.0
CAN.G322.39 Capsicum annuum HOM05D000301 ORTHO05D010895 1.4e-26 122.9 73 86.3
Nitab4.5_0002097g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 4.0e-26 121.3 73 80.8
Nitab4.5_0001401g0010 Nicotiana tabacum HOM05D000301 ORTHO05D010895 6.8e-26 120.6 73 80.8
Nitab4.5_0000381g0090 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.6e-25 118.6 73 78.1
PGSC0003DMG400025824 Solanum tuberosum HOM05D000301 ORTHO05D010895 4.4e-25 117.9 73 80.8
Nitab4.5_0003726g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.7e-24 115.9 73 79.5
Sopen01g050860 Solanum pennellii HOM05D000301 ORTHO05D010895 3.7e-24 114.8 73 78.1
Nitab4.5_0003726g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 8.3e-24 113.6 73 78.1
Solyc01g108640.1 Solanum lycopersicum HOM05D000301 ORTHO05D010895 4.1e-23 111.3 73 75.3
Peaxi162Scf00016g00157 Petunia axillaris HOM05D000301 ORTHO05D010895 4.1e-15 84.7 62 67.7
Nitab4.5_0004940g0070 Nicotiana tabacum HOM05D000301 ORTHO05D010895 5.4e-15 84.3 71 57.7
Nitab4.5_0001907g0060 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.7e-14 82.0 71 54.9
Nitab4.5_0002251g0090 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.3e-13 79.0 71 53.5
Nitab4.5_0005606g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 3.9e-13 78.2 71 53.5
Peaxi162Scf01077g00001 Petunia axillaris HOM05D000301 ORTHO05D010895 1.6e-11 72.8 64 59.4
Peaxi162Scf00104g00052 Petunia axillaris HOM05D000301 ORTHO05D010895 2.1e-11 72.4 64 59.4
Peaxi162Scf01028g00002 Petunia axillaris HOM05D000301 ORTHO05D010895 2.1e-11 72.4 64 59.4
Peaxi162Scf00751g00066 Petunia axillaris HOM05D000301 ORTHO05D010895 4.7e-11 71.2 64 57.8
Peaxi162Scf01028g00001 Petunia axillaris HOM05D000301 ORTHO05D010895 6.2e-11 70.9 64 57.8
Peaxi162Scf00104g00071 Petunia axillaris HOM05D000301 ORTHO05D010895 8.1e-11 70.5 64 57.8
Nitab4.5_0005606g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.4e-10 68.9 58 58.6
Peaxi162Scf00564g00057 Petunia axillaris HOM05D000301 ORTHO05D010895 5.2e-10 67.8 63 57.1
Nitab4.5_0010418g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 8.9e-10 67.0 60 56.7
MELO3C027052.2 Cucumis melo HOM05D000301 ORTHO05D000303 5.8e-09 64.3 66 51.5
Nitab4.5_0013616g0020 Nicotiana tabacum HOM05D000301 ORTHO05D010895 5.8e-09 64.3 66 57.6
Actinidia17857 Actinidia chinensis HOM05D000301 ORTHO05D010895 1.7e-08 62.8 65 49.2
Nitab4.5_0009023g0030 Nicotiana tabacum HOM05D000301 ORTHO05D010895 2.9e-08 62.0 43 74.4
Actinidia17858 Actinidia chinensis HOM05D000301 ORTHO05D010895 3.8e-08 61.6 65 47.7
Sc04g0004010 Simmondsia chinensis HOM05D000301 ORTHO05D000303 3.8e-08 61.6 83 42.2
Rhsim05G0087500 Rhododendron simsii HOM05D000301 ORTHO05D010895 4.9e-08 61.2 65 47.7
Sabra05G0029800 Salix brachista HOM05D000301 ORTHO05D000303 1.1e-07 60.1 63 47.6
Nitab4.5_0001968g0040 Nicotiana tabacum HOM05D000301 ORTHO05D010895 1.9e-07 59.3 55 60.0
Sc04g0004020 Simmondsia chinensis HOM05D000301 ORTHO05D000303 2.4e-07 58.9 83 39.8
Cc04_g08500 Coffea canephora HOM05D000301 ORTHO05D000303 3.2e-07 58.5 65 44.6
Cc05_g00100 Coffea canephora HOM05D000301 ORTHO05D000303 3.2e-07 58.5 65 44.6
Os01g0215000 Oryza sativa ssp. japonica HOM05D000301 ORTHO05D000303 3.2e-07 58.5 70 42.9
CsaV3_2G006710 Cucumis sativus L. HOM05D000301 ORTHO05D000303 5.4e-07 57.8 55 56.4
CsaV3_2G006700 Cucumis sativus L. HOM05D000301 ORTHO05D000303 7.1e-07 57.4 66 47.0
COL.COLO4_21764 Corchorus olitorius HOM05D000301 ORTHO05D000303 1.6e-06 56.2 66 43.9
AUR62004292 Chenopodium quinoa HOM05D000301 ORTHO05D000303 2.1e-06 55.8 65 46.2
AUR62033363 Chenopodium quinoa HOM05D000301 ORTHO05D000303 2.1e-06 55.8 65 46.2
ClCG02G015310 Citrullus lanatus HOM05D000301 ORTHO05D000303 2.1e-06 55.8 66 45.5
Ciclev10003375m.g Citrus clementina HOM05D000301 ORTHO05D000303 2.7e-06 55.5 66 47.0
CsaV3_2G009790 Cucumis sativus L. HOM05D000301 ORTHO05D000303 2.7e-06 55.5 66 47.0
ClCG02G015300 Citrullus lanatus HOM05D000301 ORTHO05D000303 3.5e-06 55.1 66 45.5
MELO3C000230.2 Cucumis melo HOM05D000301 ORTHO05D000303 4.6e-06 54.7 66 45.5
MELO3C027357.2 Cucumis melo HOM05D000301 ORTHO05D000303 4.6e-06 54.7 66 45.5
CsaV3_7G023310 Cucumis sativus L. HOM05D000301 ORTHO05D000303 4.6e-06 54.7 66 45.5
Gorai.009G437600 Gossypium raimondii HOM05D000301 ORTHO05D000303 4.6e-06 54.7 65 41.5
Nitab4.5_0000056g0110 Nicotiana tabacum HOM05D000301 ORTHO05D000303 4.6e-06 54.7 86 38.4
Sc16g0006610 Simmondsia chinensis HOM05D000301 ORTHO05D000303 4.6e-06 54.7 83 36.1
Zm00001eb338520 Zea mays HOM05D000301 ORTHO05D000303 4.6e-06 54.7 69 47.8
Zm00001eb338550 Zea mays HOM05D000301 ORTHO05D000303 4.6e-06 54.7 69 47.8
Gohir.D05G368900 Gossypium hirsutum HOM05D000301 ORTHO05D000303 6.0e-06 54.3 65 41.5
Rhsim05G0053800 Rhododendron simsii HOM05D000301 ORTHO05D000303 6.0e-06 54.3 55 54.5
Eucgr.H04541 Eucalyptus grandis HOM05D000301 ORTHO05D000303 7.8e-06 53.9 61 50.8
Gohir.A04G017300 Gossypium hirsutum HOM05D000301 ORTHO05D000303 7.8e-06 53.9 65 43.1
Hma1.2p1_1021F.1_g248680 Hydrangea macrophylla HOM05D000301 ORTHO05D000303 7.8e-06 53.9 61 47.5
Sc16g0006620 Simmondsia chinensis HOM05D000301 ORTHO05D000303 7.8e-06 53.9 86 34.9


User provided reference genes

Program Settings