Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 5.1e-88 327.8 175 100.0
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 5.9e-84 314.3 172 96.5
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 7.7e-84 313.9 172 96.5
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 9.7e-71 270.4 149 96.6
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 2.2e-70 269.2 172 80.8
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 8.2e-70 267.3 172 80.2
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.4e-69 266.5 172 80.8
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 2.4e-69 265.8 172 82.0
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 3.1e-69 265.4 172 80.2
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 7.0e-69 264.2 172 79.1
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 2.0e-68 262.7 173 79.8
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 7.7e-68 260.8 172 78.5
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 1.0e-67 260.4 172 79.1
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.3e-67 260.0 173 79.2
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.7e-67 259.6 172 80.2
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 2.2e-67 259.2 173 79.2
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 2.2e-67 259.2 172 78.5
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 2.9e-67 258.8 173 79.8
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 2.9e-67 258.8 172 77.9
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 6.5e-67 257.7 172 77.9
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 6.5e-67 257.7 172 77.9
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 8.5e-67 257.3 172 78.5
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 1.1e-66 256.9 172 76.7
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 1.5e-66 256.5 172 76.7
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 1.9e-66 256.1 173 77.5
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 1.9e-66 256.1 172 78.5
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 4.2e-66 255.0 172 76.7
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 5.5e-66 254.6 172 79.1
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 7.2e-66 254.2 172 76.7
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 7.2e-66 254.2 171 77.8
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 7.2e-66 254.2 172 76.2
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 1.6e-65 253.1 174 76.4
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 2.1e-65 252.7 174 76.4
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 3.6e-65 251.9 173 75.1
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 8.0e-65 250.8 172 75.6
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 8.0e-65 250.8 172 77.9
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 8.0e-65 250.8 173 77.5
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.8e-64 249.6 181 73.5
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.8e-64 249.6 172 74.4
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.0e-64 248.8 172 76.7
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 3.9e-64 248.4 174 74.1
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.9e-64 248.4 174 74.1
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 5.2e-64 248.1 172 75.0
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 6.7e-64 247.7 172 75.0
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 6.7e-64 247.7 172 77.3
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 6.7e-64 247.7 172 77.3
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 8.8e-64 247.3 172 75.0
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 2.0e-63 246.1 172 73.8
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 4.4e-63 245.0 169 74.6
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 5.7e-63 244.6 175 74.3
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 9.7e-63 243.8 172 73.3
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.2e-62 242.7 180 71.7
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 3.7e-62 241.9 168 78.0
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 4.8e-62 241.5 173 74.6
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 8.2e-62 240.7 167 76.0
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 1.8e-61 239.6 173 74.6
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 2.4e-61 239.2 193 68.4
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 3.1e-61 238.8 167 74.3
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 7.0e-61 237.7 173 74.6
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 9.1e-61 237.3 173 73.4
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 1.2e-60 236.9 172 73.3
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.6e-60 236.5 172 72.7
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.6e-60 236.5 173 72.3
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 5.0e-59 231.5 150 80.7
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 3.2e-58 228.8 144 81.9
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 2.1e-57 226.1 149 81.2
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 2.7e-57 225.7 173 71.1
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 3.6e-57 225.3 173 70.5
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 6.1e-57 224.6 173 71.1
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 6.1e-57 224.6 150 79.3
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 8.0e-57 224.2 173 70.5
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 3.0e-56 222.2 173 69.9
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 4.0e-56 221.9 173 69.9
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 5.2e-56 221.5 173 70.5
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 1.2e-55 220.3 144 79.9
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.5e-55 219.9 173 69.9
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 3.4e-55 218.8 173 68.8
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 5.7e-55 218.0 173 68.2
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 7.5e-55 217.6 173 68.8
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 7.5e-55 217.6 144 78.5
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 1.3e-54 216.9 165 66.1
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 6.3e-54 214.5 153 72.5
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 9.1e-53 210.7 174 68.4
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 9.1e-53 210.7 142 75.4
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 1.6e-52 209.9 144 75.0
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 1.6e-52 209.9 144 77.1
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 7.7e-52 207.6 165 63.6
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 7.7e-52 207.6 172 64.5
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.9e-51 205.7 172 64.5
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 4.7e-49 198.4 143 72.0
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 3.0e-48 195.7 166 61.4
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 4.0e-48 195.3 150 69.3
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.5e-47 193.4 172 65.1
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 4.9e-46 188.3 165 58.8
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.2e-44 183.7 172 62.2
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 3.6e-41 172.2 165 55.8
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.5e-39 166.8 120 72.5
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 9.8e-39 164.1 111 77.5
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 4.9e-38 161.8 113 73.5
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.4e-37 160.2 139 68.3
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 3.2e-37 159.1 144 62.5
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 7.0e-37 157.9 123 71.5
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 9.5e-34 147.5 100 74.0
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 2.1e-33 146.4 120 68.3
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 2.2e-30 136.3 89 79.8
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 4.6e-28 128.6 99 68.7
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 4.6e-28 128.6 120 61.7
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 8.6e-27 124.4 174 40.8
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.1e-26 124.0 164 53.0
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 3.6e-25 119.0 95 68.4
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 4.7e-25 118.6 159 41.5
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 5.2e-24 115.2 99 60.6
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 1.5e-23 113.6 86 69.8
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 1.5e-23 113.6 177 41.2
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.5e-23 113.6 95 66.3
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 4.4e-23 112.1 128 50.8
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.3e-22 110.5 104 57.7
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.9e-19 99.0 71 73.2
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 1.1e-18 97.4 86 67.4
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.4e-16 90.5 104 51.9
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 2.0e-15 86.7 115 47.0
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 1.9e-13 80.1 59 69.5
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.9e-13 80.1 58 74.1
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 7.8e-12 74.7 64 62.5
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 3.0e-11 72.8 64 56.2
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 3.9e-11 72.4 86 46.5
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 2.5e-10 69.7 47 76.6
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 3.3e-10 69.3 51 64.7
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 4.7e-09 65.5 56 62.5


User provided reference genes

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