Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1029.1 Capsicum annuum HOM05D000002 ORTHO05D004433 1.1e-130 469.9 235 100.0
CAN.G1029.2 Capsicum annuum HOM05D000248 ORTHO05D000146 6.3e-25 118.6 80 76.2
SHI37106 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-18 96.3 201 32.8
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-18 95.9 161 35.4
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.5e-18 95.1 117 45.3
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.7e-17 94.0 121 39.7
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-17 94.0 160 35.0
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-17 93.2 144 36.1
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 2.9e-17 93.2 134 37.3
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-17 93.2 134 38.1
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-17 92.8 181 32.0
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-17 92.4 144 35.4
PGSC0003DMG400041790 Solanum tuberosum HOM05D000248 ORTHO05D000146 4.9e-17 92.4 83 62.7
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-16 91.3 134 37.3
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-16 90.5 154 35.7
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-16 90.1 160 33.1
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-16 89.7 160 33.8
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 4.1e-16 89.4 116 40.5
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-16 89.4 143 37.1
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-16 89.4 143 37.1
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 4.1e-16 89.4 116 40.5
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-16 89.0 129 35.7
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-16 89.0 160 33.1
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-15 86.7 134 35.8
PGSC0003DMG400010694 Solanum tuberosum HOM05D000002 ORTHO05D004433 3.5e-15 86.3 62 64.5
PGSC0003DMG400038170 Solanum tuberosum HOM05D000248 ORTHO05D000146 5.9e-15 85.5 89 55.1
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-14 84.3 128 36.7
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-14 84.3 181 30.9
Oeu032225.1 Olea europaea HOM05D000002 ORTHO05D004433 3.9e-14 82.8 114 41.2
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 5.0e-14 82.4 135 36.3
PGSC0003DMG400046635 Solanum tuberosum HOM05D000002 ORTHO05D004433 6.6e-14 82.0 116 43.1
PGSC0003DMG400036053 Solanum tuberosum HOM05D000248 ORTHO05D000146 1.1e-13 81.3 96 46.9
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 1.5e-13 80.9 148 34.5
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 4.3e-13 79.3 80 43.8
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 5.6e-13 79.0 91 44.0
SHI04169 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-13 78.2 160 31.9
CSS0018245 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-12 77.8 101 41.6
PGSC0003DMG400016862 Solanum tuberosum HOM05D000248 ORTHO05D000146 1.6e-12 77.4 60 68.3
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.0e-12 75.1 88 40.9
Peaxi162Scf00047g00921 Petunia axillaris HOM05D000248 ORTHO05D000146 8.0e-12 75.1 92 46.7
CANSAT80G0509 Cannabis sativa HOM05D000054 ORTHO05D000286 1.4e-11 74.3 110 39.1
CAN.G500.53 Capsicum annuum HOM05D000248 ORTHO05D000146 1.4e-11 74.3 92 46.7
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.8e-11 73.9 130 33.8
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 3.1e-11 73.2 89 40.4
Peaxi162Scf00047g00923 Petunia axillaris HOM05D000248 ORTHO05D000146 4.0e-11 72.8 74 51.4
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 6.8e-11 72.0 110 35.5
GSVIVG01017482001 Vitis vinifera HOM05D000002 ORTHO05D004433 8.9e-11 71.6 130 35.4
SHI12755 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-10 71.2 119 37.0
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-10 69.7 84 41.7
SHI05550 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-10 69.3 117 33.3
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-10 68.9 76 46.1
Sopen12g033010 Solanum pennellii HOM05D000248 ORTHO05D000146 7.5e-10 68.6 156 35.3
CAN.G566.20 Capsicum annuum HOM05D000248 ORTHO05D000294 9.8e-10 68.2 117 38.5
Nitab4.5_0002376g0020 Nicotiana tabacum HOM05D000248 ORTHO05D000146 9.8e-10 68.2 79 43.0
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-09 67.8 144 31.9
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 1.3e-09 67.8 91 41.8
Solyc12g098190.2 Solanum lycopersicum HOM05D000248 ORTHO05D000146 1.7e-09 67.4 156 35.3
Solyc04g056680.2 Solanum lycopersicum HOM05D000248 ORTHO05D000146 2.2e-09 67.0 117 37.6
Sopen04g025590 Solanum pennellii HOM05D000248 ORTHO05D000146 2.2e-09 67.0 117 37.6
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 2.9e-09 66.6 143 32.2
CAN.G492.33 Capsicum annuum HOM05D000002 ORTHO05D004433 3.7e-09 66.2 92 37.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-09 66.2 166 28.9
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 3.7e-09 66.2 74 41.9
Nitab4.5_0000676g0300 Nicotiana tabacum HOM05D000248 ORTHO05D000146 8.3e-09 65.1 88 44.3
PGSC0003DMG400033643 Solanum tuberosum HOM05D000248 ORTHO05D000146 8.3e-09 65.1 102 39.2
PGSC0003DMG402029345 Solanum tuberosum HOM05D000005 ORTHO05D000294 8.3e-09 65.1 118 37.3
COL.COLO4_30078 Corchorus olitorius HOM05D000002 ORTHO05D004433 1.4e-08 64.3 82 43.9
Solyc12g098200.2 Solanum lycopersicum HOM05D000248 ORTHO05D000146 1.9e-08 63.9 102 40.2
Sopen12g033020 Solanum pennellii HOM05D000248 ORTHO05D000146 1.9e-08 63.9 102 39.2
Cc03_g07480 Coffea canephora HOM05D000248 ORTHO05D000146 3.2e-08 63.2 96 42.7
Cc03_g07500 Coffea canephora HOM05D000248 ORTHO05D000146 3.2e-08 63.2 96 42.7
PGSC0003DMG401029345 Solanum tuberosum HOM05D000005 ORTHO05D000294 3.2e-08 63.2 89 44.9
Cc00_g28700 Coffea canephora HOM05D000248 ORTHO05D000146 4.1e-08 62.8 96 42.7
PGSC0003DMG400016861 Solanum tuberosum HOM05D000248 ORTHO05D000146 4.1e-08 62.8 102 38.2
Peaxi162Scf00817g00117 Petunia axillaris HOM05D000248 ORTHO05D000146 5.4e-08 62.4 74 47.3
Sopen01g014490 Solanum pennellii HOM05D000004 ORTHO05D000002 5.4e-08 62.4 74 40.5
CAN.G706.7 Capsicum annuum HOM05D000248 ORTHO05D000146 7.0e-08 62.0 102 39.2
Peaxi162Scf00817g00116 Petunia axillaris HOM05D000248 ORTHO05D000146 7.0e-08 62.0 90 41.1
Solyc12g044930.3 Solanum lycopersicum HOM05D000248 ORTHO05D000146 7.0e-08 62.0 90 42.2
PGSC0003DMG400016863 Solanum tuberosum HOM05D000248 ORTHO05D000146 7.0e-08 62.0 155 33.5
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 9.2e-08 61.6 103 38.8
CAN.G706.12 Capsicum annuum HOM05D000248 ORTHO05D000146 9.2e-08 61.6 77 42.9
Nitab4.5_0000676g0270 Nicotiana tabacum HOM05D000248 ORTHO05D000146 9.2e-08 61.6 74 47.3
CAN.G706.11 Capsicum annuum HOM05D000248 ORTHO05D000146 1.2e-07 61.2 89 42.7
PGSC0003DMG400045820 Solanum tuberosum HOM05D000248 ORTHO05D000146 1.2e-07 61.2 117 35.9
SalBow8G1669 Salvia bowleyana HOM05D000248 ORTHO05D000146 1.6e-07 60.8 83 43.4
Sopen12g032710 Solanum pennellii HOM05D000248 ORTHO05D000294 2.0e-07 60.5 89 41.6
CAN.G706.14 Capsicum annuum HOM05D000248 ORTHO05D000146 2.7e-07 60.1 74 45.9
Nitab4.5_0005337g0050 Nicotiana tabacum HOM05D000248 ORTHO05D000146 2.7e-07 60.1 90 44.4
Solyc12g096900.2 Solanum lycopersicum HOM05D000248 ORTHO05D000294 2.7e-07 60.1 118 38.1
CAN.G706.10 Capsicum annuum HOM05D000248 ORTHO05D000146 3.5e-07 59.7 89 42.7
Peaxi162Scf65262g00002 Petunia axillaris HOM05D000248 ORTHO05D000146 6.0e-07 58.9 78 42.3
QL09p029398 Quercus lobata HOM05D000248 ORTHO05D000146 7.8e-07 58.5 126 33.3
Solyc12g096890.1 Solanum lycopersicum HOM05D000248 ORTHO05D000146 7.8e-07 58.5 89 40.4
Sopen12g032720 Solanum pennellii HOM05D000248 ORTHO05D000294 1.0e-06 58.2 118 37.3
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 57.8 118 28.8
SHI05544 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-06 57.8 124 30.6
Sopen12g023290 Solanum pennellii HOM05D000248 ORTHO05D000146 1.3e-06 57.8 102 35.3
Nitab4.5_0005337g0040 Nicotiana tabacum HOM05D000248 ORTHO05D000146 1.7e-06 57.4 74 44.6
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 57.4 160 26.9
Peaxi162Scf00938g00211 Petunia axillaris HOM05D000248 ORTHO05D000146 2.3e-06 57.0 77 40.3
CAN.G65.42 Capsicum annuum HOM05D000002 ORTHO05D022157 3.0e-06 56.6 61 42.6
Migut.G00660 Erythranthe guttata HOM05D000248 ORTHO05D000146 6.6e-06 55.5 78 42.3


User provided reference genes

Program Settings