Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 8.1e-152 540.4 282 100.0
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 4.2e-76 288.9 297 59.6
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.5e-73 280.4 220 70.9
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 1.5e-73 280.4 220 70.9
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 2.2e-72 276.6 220 69.5
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 4.1e-71 272.3 220 70.0
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.3e-69 267.3 232 66.4
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 2.1e-59 233.4 222 63.1
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 6.6e-53 211.8 167 69.5
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 2.4e-42 176.8 151 65.6
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 2.6e-41 173.3 198 54.0
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 9.9e-41 171.4 210 49.5
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 1.7e-40 170.6 210 49.5
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 5.4e-39 165.6 219 51.6
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 1.2e-38 164.5 220 49.1
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 1.7e-37 160.6 180 52.2
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 1.9e-36 157.1 191 52.4
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 1.9e-36 157.1 181 53.0
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 5.6e-36 155.6 136 61.8
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 5.6e-36 155.6 223 47.1
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 7.3e-36 155.2 181 52.5
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 9.6e-36 154.8 203 47.3
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 1.3e-35 154.5 252 44.4
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 2.8e-35 153.3 131 63.4
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 6.2e-35 152.1 208 46.6
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 6.2e-35 152.1 257 42.4
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 1.1e-34 151.4 200 48.0
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 1.4e-34 151.0 227 44.9
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 5.3e-34 149.1 130 62.3
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 9.0e-34 148.3 264 42.8
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 1.2e-33 147.9 160 56.2
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 1.5e-33 147.5 220 46.4
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 2.6e-33 146.7 188 50.5
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 4.4e-33 146.0 185 51.4
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 9.9e-33 144.8 164 53.7
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 9.9e-33 144.8 140 59.3
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 2.2e-32 143.7 174 49.4
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 2.9e-32 143.3 205 46.3
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 6.4e-32 142.1 164 51.8
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 1.1e-31 141.4 183 48.6
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 1.4e-31 141.0 185 45.9
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.9e-31 140.6 171 49.7
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 2.4e-31 140.2 164 50.6
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 2.4e-31 140.2 164 50.6
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 3.2e-31 139.8 152 55.3
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 3.2e-31 139.8 182 47.8
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 3.2e-31 139.8 169 51.5
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 5.4e-31 139.0 159 55.3
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 2.1e-30 137.1 220 45.0
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 2.7e-30 136.7 172 49.4
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 2.7e-30 136.7 173 48.0
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 3.5e-30 136.3 259 39.0
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 4.6e-30 136.0 245 41.2
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 6.0e-30 135.6 164 50.6
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 6.0e-30 135.6 87 77.0
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 7.9e-30 135.2 164 51.2
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 1.0e-29 134.8 215 43.3
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 1.0e-29 134.8 169 49.1
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 2.3e-29 133.7 167 49.7
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 2.3e-29 133.7 203 44.8
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 3.0e-29 133.3 227 42.3
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 3.0e-29 133.3 172 49.4
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 3.0e-29 133.3 87 74.7
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 3.9e-29 132.9 164 50.6
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 3.9e-29 132.9 164 48.8
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 6.6e-29 132.1 164 48.8
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 8.7e-29 131.7 219 44.7
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 1.5e-28 131.0 167 49.1
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 1.9e-28 130.6 250 38.8
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 1.9e-28 130.6 206 42.2
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 1.9e-28 130.6 87 72.4
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 1.9e-28 130.6 194 43.3
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 4.3e-28 129.4 179 44.7
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 5.6e-28 129.0 221 43.4
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 9.6e-28 128.3 231 39.0
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 1.3e-27 127.9 246 37.4
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 1.3e-27 127.9 224 41.5
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 2.1e-27 127.1 293 37.9
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 3.6e-27 126.3 170 47.6
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 3.6e-27 126.3 344 34.6
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 6.2e-27 125.6 170 48.2
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 1.8e-26 124.0 225 41.3
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 5.3e-26 122.5 274 35.4
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 5.8e-25 119.0 186 45.2
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 2.9e-24 116.7 231 38.1
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 2.9e-24 116.7 222 39.6
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 3.8e-24 116.3 188 42.6
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 2.4e-23 113.6 199 40.2
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 4.2e-23 112.8 182 42.3
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 4.2e-23 112.8 227 38.3
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 7.1e-23 112.1 207 38.2
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 9.3e-23 111.7 281 33.5
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 1.2e-22 111.3 225 38.2
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 2.1e-22 110.5 239 36.4
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 2.7e-22 110.2 179 44.1
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 2.7e-22 110.2 154 42.9
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 6.0e-22 109.0 161 44.7
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 6.0e-22 109.0 219 37.9
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 1.3e-21 107.8 89 60.7
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 1.8e-21 107.5 177 40.1
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 2.3e-21 107.1 95 57.9
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 3.0e-21 106.7 175 40.6
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 3.0e-21 106.7 163 48.5
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 3.9e-21 106.3 223 37.2
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 6.7e-21 105.5 223 37.2
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 6.7e-21 105.5 223 36.8
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 8.7e-21 105.1 289 31.8
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.5e-20 104.4 222 36.9
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 1.5e-20 104.4 288 31.6
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 1.9e-20 104.0 158 43.7
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 1.9e-20 104.0 86 61.6
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 2.5e-20 103.6 182 40.1
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 3.3e-20 103.2 159 45.3
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 5.6e-20 102.4 168 42.3
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 5.6e-20 102.4 224 37.1
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 7.4e-20 102.1 196 40.8
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 1.6e-19 100.9 255 36.5
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 3.7e-19 99.8 215 35.8
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 4.8e-19 99.4 168 41.7
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 2.4e-18 97.1 184 38.0
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 3.1e-18 96.7 239 35.6
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 9.0e-18 95.1 169 40.2
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 1.5e-17 94.4 72 68.1
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 2.0e-17 94.0 86 57.0
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 2.0e-17 94.0 86 57.0
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 5.8e-17 92.4 169 39.1
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 1.0e-16 91.7 161 41.0
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 1.7e-16 90.9 201 36.3
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 2.2e-16 90.5 158 38.6
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 4.9e-16 89.4 161 41.6
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 6.5e-16 89.0 164 39.6
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 1.4e-15 87.8 162 36.4
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 2.5e-15 87.0 81 56.8
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 2.5e-15 87.0 81 56.8
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 1.2e-14 84.7 162 36.4
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 2.7e-14 83.6 158 39.2
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 3.0e-13 80.1 119 44.5
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 9.0e-10 68.6 90 44.4
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 3.4e-09 66.6 103 44.7
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 7.6e-09 65.5 101 47.5
PSO541G1879 Papaver somniferum HOM05D005042 ORTHO05D006080 6.1e-06 55.8 79 38.0


User provided reference genes

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