Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 0.0e+00 1492.6 771 100.0
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 0.0e+00 1278.1 774 86.8
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 0.0e+00 1271.1 774 85.9
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 0.0e+00 1113.2 778 77.6
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 0.0e+00 1090.9 737 80.1
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 5.6e-280 967.6 668 77.4
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 3.2e-235 818.9 503 85.5
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 5.6e-179 632.1 767 48.2
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 4.8e-154 549.3 782 43.1
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 6.9e-153 545.4 771 45.4
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 5.8e-152 542.3 802 44.9
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 3.5e-149 533.1 756 44.8
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.8e-146 523.5 784 43.6
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 4.0e-145 519.6 772 43.0
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 6.5e-143 512.3 716 45.9
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 1.4e-137 494.6 762 41.1
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 4.1e-137 493.0 810 42.0
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 1.3e-135 488.0 718 43.9
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 6.7e-132 475.7 670 46.1
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 2.8e-130 470.3 798 39.6
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 2.9e-127 460.3 773 40.6
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.1e-126 458.4 747 40.2
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 6.1e-125 452.6 638 45.9
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 2.3e-124 450.7 749 39.8
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 3.0e-124 450.3 749 40.2
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 4.8e-122 443.0 757 39.5
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 3.1e-121 440.3 769 38.2
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 5.3e-121 439.5 769 38.4
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 7.0e-121 439.1 769 39.0
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 5.9e-120 436.0 779 37.1
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.3e-119 434.9 738 38.9
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.1e-115 421.8 772 38.1
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 1.5e-115 421.4 782 36.8
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.5e-115 421.4 794 36.8
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 9.7e-115 418.7 793 37.3
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 2.2e-114 417.5 750 37.9
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.8e-114 417.2 792 36.5
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.7e-114 416.8 760 37.9
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 1.8e-113 414.5 761 38.1
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 3.5e-112 410.2 752 36.7
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.0e-111 408.7 744 38.3
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 2.9e-111 407.1 760 37.4
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.0e-111 406.4 760 37.4
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.1e-110 405.2 758 37.9
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.2e-109 401.7 760 37.1
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 5.7e-107 392.9 774 35.3
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 3.1e-105 387.1 768 36.8
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.1e-97 362.1 768 34.8
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 2.7e-96 357.5 790 33.5
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 6.6e-95 352.8 770 36.1
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 2.5e-94 350.9 775 35.4
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 3.3e-94 350.5 772 34.8
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 6.1e-93 346.3 753 34.5
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 5.7e-91 339.7 659 35.7
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 1.2e-88 332.0 766 33.4
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 3.5e-88 330.5 549 39.5
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 1.3e-87 328.6 746 33.0
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.0e-80 304.7 750 32.5
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 1.0e-79 302.4 700 32.7
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 3.9e-79 300.4 701 34.8
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 4.7e-77 293.5 695 34.7
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 4.0e-76 290.4 795 32.1
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 4.4e-75 287.0 653 33.7
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 5.8e-75 286.6 849 31.1
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 9.8e-75 285.8 807 31.8
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 9.8e-75 285.8 473 40.4
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 1.7e-74 285.0 706 33.3
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 2.2e-74 284.6 696 33.5
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 1.4e-73 282.0 720 33.5
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 2.4e-73 281.2 763 31.1
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 1.0e-71 275.8 691 32.1
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 1.7e-71 275.0 795 30.8
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 3.3e-70 270.8 591 34.3
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 2.1e-69 268.1 699 31.0
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 2.8e-69 267.7 785 32.1
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 8.1e-69 266.2 785 31.0
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 1.1e-68 265.8 785 31.0
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 1.4e-68 265.4 790 30.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 7.5e-67 259.6 477 38.2
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 1.3e-66 258.8 659 33.5
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 3.7e-66 257.3 790 30.5
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 4.6e-64 250.4 600 32.7
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 2.3e-63 248.1 760 32.0
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 1.5e-62 245.4 800 30.1
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 2.2e-58 231.5 742 30.5
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 4.9e-58 230.3 722 30.7
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 8.4e-58 229.6 752 30.2
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 2.4e-52 211.5 753 29.7
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 1.3e-50 205.7 637 30.9
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 1.7e-50 205.3 537 31.8
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 6.4e-50 203.4 526 31.7
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 2.4e-49 201.4 784 27.0
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 2.4e-49 201.4 766 28.3
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 3.2e-49 201.1 538 31.8
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 9.3e-49 199.5 765 26.3
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 4.5e-43 180.6 723 27.9
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 1.7e-42 178.7 360 35.3
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.8e-39 168.7 605 27.9
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 1.6e-29 135.6 275 33.8
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 6.9e-28 130.2 425 30.6
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 4.9e-26 124.0 739 24.8
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 3.9e-23 114.4 717 23.3
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 1.2e-19 102.8 84 60.7
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 4.6e-16 90.9 130 42.3
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 7.4e-14 83.6 212 33.0
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 1.4e-12 79.3 134 38.8
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 9.1e-12 76.6 166 33.7
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 2.0e-11 75.5 567 22.4
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 3.4e-11 74.7 118 37.3
SEGI_13134 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 2.1e-08 65.5 325 27.4
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 7.9e-08 63.5 69 49.3
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 6.7e-07 60.5 146 32.2


User provided reference genes

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