Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G102.4 Capsicum annuum HOM05D001035 ORTHO05D001045 2.6e-77 292.0 145 100.0
Sopen11g011250 Solanum pennellii HOM05D001035 ORTHO05D001045 3.7e-23 112.1 61 86.9
Peaxi162Scf00391g00737 Petunia axillaris HOM05D001035 ORTHO05D001045 8.2e-23 110.9 61 86.9
Nitab4.5_0002013g0020 Nicotiana tabacum HOM05D001035 ORTHO05D001045 3.1e-22 109.0 61 86.9
Nitab4.5_0003211g0030 Nicotiana tabacum HOM05D001035 ORTHO05D001045 1.5e-21 106.7 61 85.2
Solyc11g022380.3 Solanum lycopersicum HOM05D001035 ORTHO05D001045 4.5e-13 78.6 61 65.6
Dinv41743 Davidia involucrata HOM05D001035 ORTHO05D001045 2.2e-12 76.3 61 50.8
FvH4_5g32060 Fragaria vesca HOM05D001035 ORTHO05D001045 5.0e-12 75.1 61 57.4
FAN08G1353 Fragaria x ananassa HOM05D001035 ORTHO05D001045 5.0e-12 75.1 61 57.4
FAN18G0239 Fragaria x ananassa HOM05D001035 ORTHO05D001045 5.0e-12 75.1 61 57.4
MD15G1408200 Malus domestica HOM05D001035 ORTHO05D001045 5.0e-12 75.1 61 55.7
FAN13G2816 Fragaria x ananassa HOM05D001035 ORTHO05D001045 6.5e-12 74.7 61 57.4
CSS0040615 Camellia sinensis var. sinensis HOM05D001035 ORTHO05D001045 1.4e-11 73.6 61 54.1
CiPaw.08G002100 Carya illinoinensis HOM05D001035 ORTHO05D001045 1.4e-11 73.6 61 54.1
CSS0025594 Camellia sinensis var. sinensis HOM05D001035 ORTHO05D001045 3.2e-11 72.4 62 53.2
Haze_21290 Corylus avellana HOM05D001035 ORTHO05D001045 3.2e-11 72.4 61 50.8
MD08G1219600 Malus domestica HOM05D001035 ORTHO05D001045 3.2e-11 72.4 61 52.5
Prupe.1G552900 Prunus persica HOM05D001035 ORTHO05D001045 3.2e-11 72.4 61 55.7
Cfa012766 Carpinus fangiana HOM05D001035 ORTHO05D001045 5.5e-11 71.6 61 49.2
RcHm_v2.0_Chr7g0228111 Rosa chinensis HOM05D001035 ORTHO05D001045 5.5e-11 71.6 60 55.0
GSVIVG01036236001 Vitis vinifera HOM05D001035 ORTHO05D001045 1.6e-10 70.1 61 50.8
Cc10_g10150 Coffea canephora HOM05D001035 ORTHO05D001045 2.1e-10 69.7 61 52.5
Migut.C01305 Erythranthe guttata HOM05D001035 ORTHO05D001045 7.9e-10 67.8 60 50.0
SGA_v2.0_scaffold118G32529 Striga asiatica HOM05D001035 ORTHO05D001045 1.0e-09 67.4 61 52.5
Phvul.011G001200 Phaseolus vulgaris HOM05D001035 ORTHO05D001045 1.4e-09 67.0 61 50.8
SGA_v2.0_scaffold118G32518 Striga asiatica HOM05D001035 ORTHO05D001045 1.4e-09 67.0 61 52.5
VMungo1127G0841 Vigna mungo HOM05D001035 ORTHO05D001045 1.4e-09 67.0 61 50.8
Potri.019G080300 Populus trichocarpa HOM05D001035 ORTHO05D001045 1.8e-09 66.6 61 49.2
Oeu013894.4 Olea europaea HOM05D001035 ORTHO05D001045 2.3e-09 66.2 60 55.0
Lj3A34G36 Lonicera japonica HOM05D001035 ORTHO05D001045 3.9e-09 65.5 60 48.3
Sabra13G0093300 Salix brachista HOM05D001035 ORTHO05D001045 5.1e-09 65.1 60 50.0
TAR381G0676 Trochodendron aralioides HOM05D001035 ORTHO05D001045 5.1e-09 65.1 61 47.5
Manes.02G196600 Manihot esculenta HOM05D001035 ORTHO05D001045 6.7e-09 64.7 61 49.2
Potri.013G107950 Populus trichocarpa HOM05D001035 ORTHO05D001045 6.7e-09 64.7 60 51.7
Thecc.08G188300 Theobroma cacao HOM05D001035 ORTHO05D001045 6.7e-09 64.7 61 49.2
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 8.8e-09 64.3 118 30.5
Gohir.A02G087300 Gossypium hirsutum HOM05D001035 ORTHO05D001045 8.8e-09 64.3 61 49.2
Nn3g18383 Nelumbo nucifera HOM05D001035 ORTHO05D001045 8.8e-09 64.3 61 45.9
Eucgr.F03001 Eucalyptus grandis HOM05D001035 ORTHO05D001045 1.1e-08 63.9 61 50.8
HanXRQChr02g0044241 Helianthus annuus HOM05D001035 ORTHO05D001045 1.1e-08 63.9 119 31.9
Rhsim11G0054800 Rhododendron simsii HOM05D001035 ORTHO05D001045 1.1e-08 63.9 62 50.0
Glyma.20G071666 Glycine max HOM05D001035 ORTHO05D001045 1.5e-08 63.5 61 49.2
PGR042G2161 Punica granatum HOM05D001035 ORTHO05D001045 1.5e-08 63.5 61 45.9
Sabra19G0091500 Salix brachista HOM05D001035 ORTHO05D001045 1.5e-08 63.5 61 49.2
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 1.5e-08 63.5 61 49.2
TWI14G1389 Tripterygium wilfordii HOM05D001035 ORTHO05D001045 2.0e-08 63.2 61 45.9
Actinidia18883 Actinidia chinensis HOM05D001035 ORTHO05D001045 2.5e-08 62.8 62 48.4
Actinidia35139 Actinidia chinensis HOM05D001035 ORTHO05D001045 2.5e-08 62.8 63 47.6
Glyma.08G238800 Glycine max HOM05D001035 ORTHO05D001045 2.5e-08 62.8 61 49.2
Gohir.D02G102100 Gossypium hirsutum HOM05D001035 ORTHO05D001045 2.5e-08 62.8 61 47.5
Gorai.005G115800 Gossypium raimondii HOM05D001035 ORTHO05D001045 2.5e-08 62.8 61 47.5
Ciclev10000204m.g Citrus clementina HOM05D001035 ORTHO05D001045 3.3e-08 62.4 61 45.9
PSO170G4043 Papaver somniferum HOM05D001035 ORTHO05D001045 3.3e-08 62.4 61 55.7
Duzib116G0807 Durio zibethinus HOM05D001035 ORTHO05D001045 4.3e-08 62.0 61 45.9
arahy.Tifrunner.gnm1.ann1.V13CJX Arachis hypogaea HOM05D001035 ORTHO05D001045 5.7e-08 61.6 61 44.3
SalBow7G3463 Salvia bowleyana HOM05D001035 ORTHO05D001045 7.4e-08 61.2 61 47.5
Aqoxy5G03463 Aquilegia oxysepala HOM05D001035 ORTHO05D001045 9.7e-08 60.8 61 45.9
arahy.Tifrunner.gnm1.ann1.LX8XJC Arachis hypogaea HOM05D001035 ORTHO05D001045 1.3e-07 60.5 61 44.3
Lalb_Chr01g0000111 Lupinus albus HOM05D001035 ORTHO05D001045 1.3e-07 60.5 61 49.2
PSO017G4800 Papaver somniferum HOM05D001035 ORTHO05D001045 1.3e-07 60.5 61 54.1
Lj3g0009046 Lotus japonicus HOM05D001035 ORTHO05D001045 1.7e-07 60.1 61 45.9
Sc26g0000520 Simmondsia chinensis HOM05D001035 ORTHO05D001045 2.2e-07 59.7 59 47.5
Ca_19705_v3 Cicer arietinum L. HOM05D001035 ORTHO05D001045 2.8e-07 59.3 61 44.3
Atru.chr13.2382 Acer truncatum HOM05D001035 ORTHO05D001045 3.7e-07 58.9 61 45.9
Glyma.12G001200 Glycine max HOM05D001035 ORTHO05D001045 4.8e-07 58.5 61 49.2
unitig_32.g11184 Utricularia gibba HOM05D001035 ORTHO05D007098 6.3e-07 58.2 59 47.5
DCAR_011522 Daucus carota HOM05D001035 ORTHO05D001045 1.1e-06 57.4 61 42.6
Psat7g225680 Pisum sativum HOM05D001035 ORTHO05D001045 1.1e-06 57.4 61 45.9
Hund27102 Selenicereus undatus HOM05D001035 ORTHO05D001045 1.4e-06 57.0 61 47.5
Medtr4g032925 Medicago truncatula HOM05D001035 ORTHO05D001045 2.4e-06 56.2 61 47.5
Medtr4g032935 Medicago truncatula HOM05D001035 ORTHO05D001045 2.4e-06 56.2 61 47.5
HPP92_001194 Vanilla planifolia HOM05D001035 ORTHO05D001045 2.4e-06 56.2 61 49.2
ClCG11G008620 Citrullus lanatus HOM05D001035 ORTHO05D001045 3.1e-06 55.8 61 45.9
AUR62004617 Chenopodium quinoa HOM05D001035 ORTHO05D001045 4.1e-06 55.5 61 42.6
AUR62022644 Chenopodium quinoa HOM05D001035 ORTHO05D001045 4.1e-06 55.5 61 42.6
EL10Ac1g00120 Beta vulgaris HOM05D001035 ORTHO05D001045 5.3e-06 55.1 61 45.9
TPR.G34169 Trifolium pratense HOM05D001035 ORTHO05D001045 5.3e-06 55.1 61 44.3
MELO3C008069.2 Cucumis melo HOM05D001035 ORTHO05D001045 9.1e-06 54.3 61 44.3


User provided reference genes

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