Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 2.2e-194 682.2 359 100.0
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 3.9e-135 485.3 368 75.0
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.1e-134 483.8 368 74.7
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 4.0e-119 432.2 367 67.3
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 7.0e-116 421.4 378 67.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.6e-112 410.2 407 62.4
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.2e-85 320.1 232 70.7
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 8.6e-82 308.1 305 58.0
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.9e-81 307.0 321 56.1
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 5.6e-81 305.4 314 56.1
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.2e-80 304.3 297 59.3
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 2.8e-80 303.1 374 49.7
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 5.2e-79 298.9 251 64.9
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 5.2e-79 298.9 386 50.3
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.6e-78 296.6 291 57.4
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.6e-78 296.6 270 60.0
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 5.8e-78 295.4 368 50.3
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.2e-77 293.5 362 48.9
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.7e-77 292.7 270 60.0
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 4.9e-77 292.4 236 66.5
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 6.4e-77 292.0 360 48.6
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 6.4e-77 292.0 234 64.5
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 4.1e-76 289.3 305 52.8
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 9.2e-76 288.1 225 68.0
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.7e-74 283.9 362 47.0
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 2.3e-74 283.5 315 53.7
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 5.1e-74 282.3 246 63.0
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 8.6e-74 281.6 363 48.2
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.5e-73 280.8 264 59.8
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 1.9e-73 280.4 249 61.4
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 2.5e-73 280.0 342 48.2
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.3e-73 279.6 285 55.8
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 3.3e-73 279.6 239 62.8
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 4.3e-73 279.3 312 51.3
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 5.6e-73 278.9 260 58.5
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.3e-73 278.5 241 64.3
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 7.3e-73 278.5 307 52.8
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 7.3e-73 278.5 392 46.2
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.2e-72 277.7 278 56.5
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.6e-72 277.3 340 48.5
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 2.8e-72 276.6 317 53.0
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.6e-72 276.2 239 64.0
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 3.6e-72 276.2 361 49.3
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 6.2e-72 275.4 321 51.1
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.2e-72 275.4 241 63.5
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-71 274.6 321 52.0
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-71 274.6 255 61.2
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-71 274.2 224 66.1
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.8e-71 273.9 241 63.1
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 8.9e-71 271.6 246 60.6
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 8.9e-71 271.6 246 60.6
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 8.9e-71 271.6 230 64.3
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.2e-70 271.2 383 46.5
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.5e-70 270.8 386 47.2
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 2.6e-70 270.0 242 60.3
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 4.4e-70 269.2 243 58.0
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 4.4e-70 269.2 305 52.8
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.7e-69 267.3 237 62.0
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.2e-69 266.9 382 46.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.2e-69 266.9 240 60.0
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 3.8e-69 266.2 241 58.5
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 4.9e-69 265.8 382 44.8
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.6e-67 260.8 257 56.0
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.5e-67 259.6 381 45.4
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 4.6e-67 259.2 394 42.6
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.5e-65 254.2 315 48.6
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.5e-65 254.2 236 61.9
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.5e-65 254.2 330 46.7
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 5.6e-65 252.3 259 55.6
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 7.3e-65 251.9 190 70.0
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 9.6e-65 251.5 231 58.9
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-64 251.1 264 55.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 2.1e-64 250.4 188 68.6
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 8.1e-64 248.4 296 49.7
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.1e-63 248.1 172 72.1
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.4e-63 247.7 365 41.9
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.4e-63 247.7 251 55.8
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.4e-63 247.7 295 51.2
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 4.0e-63 246.1 280 53.9
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 6.9e-63 245.4 211 63.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.2e-62 244.6 229 59.8
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 4.4e-62 242.7 172 70.9
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.3e-61 241.1 220 59.1
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.3e-61 241.1 172 69.8
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.4e-60 236.9 210 60.5
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.4e-60 236.9 210 60.5
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 2.4e-60 236.9 371 43.7
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.2e-60 236.5 260 51.9
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 7.1e-60 235.3 210 60.5
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 7.1e-60 235.3 221 58.4
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 7.1e-60 235.3 260 51.5
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 2.1e-59 233.8 174 69.0
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 6.6e-58 228.8 218 58.7
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 2.5e-57 226.9 168 69.0
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 3.3e-57 226.5 264 50.0
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.4e-54 216.5 146 76.0
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 5.4e-52 209.1 279 44.1
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.9e-51 205.3 166 65.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 8.7e-50 201.8 239 49.8
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.6e-49 199.1 155 65.8
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.4e-47 193.7 188 56.9
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.0e-45 188.3 263 45.2
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 3.8e-45 186.4 177 59.9
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.2e-43 181.4 181 56.4
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.2e-35 154.8 119 65.5
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.0e-34 151.8 218 39.0
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.0e-34 151.8 197 47.2
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.3e-34 150.6 101 76.2
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.8e-32 143.7 190 49.5
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.3e-31 139.4 153 52.3
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.3e-31 139.4 122 62.3
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.1e-27 127.5 101 63.4
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 7.4e-25 119.0 188 36.2
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 2.7e-19 100.5 219 32.4
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.4e-18 98.2 60 81.7
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.3e-13 81.6 167 35.9
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 3.8e-13 80.1 54 64.8
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 5.0e-13 79.7 55 76.4
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.8e-08 63.9 207 34.3
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 4.8e-08 63.2 152 31.6
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 7.7e-06 55.8 85 44.7


User provided reference genes

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