Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 3.9e-50 201.1 95 100.0
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.8e-32 141.7 102 72.5
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 6.3e-32 140.6 102 71.6
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 7.0e-31 137.1 84 79.8
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 3.5e-30 134.8 102 70.6
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 4.2e-28 127.9 105 64.8
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 5.5e-28 127.5 105 62.9
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 1.2e-27 126.3 105 62.9
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.6e-27 125.9 105 62.9
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.7e-27 125.2 105 64.8
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 6.1e-27 124.0 105 61.0
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 1.4e-26 122.9 105 61.9
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 1.8e-26 122.5 105 61.9
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 2.3e-26 122.1 105 60.0
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 2.3e-26 122.1 105 61.9
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 2.3e-26 122.1 105 61.0
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 5.2e-26 120.9 105 61.9
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 5.2e-26 120.9 105 60.0
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 6.7e-26 120.6 105 60.0
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 8.8e-26 120.2 105 60.0
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.5e-25 119.4 105 59.0
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.5e-25 119.4 105 59.0
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 3.3e-25 118.2 103 60.2
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 4.4e-25 117.9 107 59.8
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 5.7e-25 117.5 104 57.7
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.5e-25 117.1 105 60.0
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.7e-25 116.7 105 59.0
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.7e-24 115.9 105 58.1
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 2.2e-24 115.5 104 58.7
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 2.8e-24 115.2 105 59.0
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.7e-24 114.8 106 59.4
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 3.7e-24 114.8 105 58.1
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 4.8e-24 114.4 104 59.6
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 4.8e-24 114.4 107 54.2
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 4.8e-24 114.4 107 54.2
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.8e-24 114.4 108 54.6
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 4.8e-24 114.4 104 56.7
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 6.3e-24 114.0 98 62.2
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 6.3e-24 114.0 117 55.6
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 8.2e-24 113.6 105 60.0
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 8.2e-24 113.6 104 55.8
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 1.1e-23 113.2 105 60.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 1.4e-23 112.8 104 55.8
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.8e-23 112.5 105 58.1
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.8e-23 112.5 105 57.1
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 2.4e-23 112.1 105 57.1
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 5.3e-23 110.9 105 58.1
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.3e-23 110.9 105 58.1
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 7.0e-23 110.5 106 55.7
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 1.2e-22 109.8 99 57.6
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.0e-22 109.0 90 63.3
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.0e-22 109.0 106 54.7
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 2.7e-22 108.6 111 52.3
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 3.5e-22 108.2 106 54.7
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 4.5e-22 107.8 103 55.3
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 4.5e-22 107.8 103 55.3
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 4.5e-22 107.8 105 52.4
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 5.9e-22 107.5 90 62.2
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 7.7e-22 107.1 96 61.5
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 1.3e-21 106.3 104 52.9
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.3e-21 106.3 140 45.0
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.8e-21 104.8 105 51.4
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 3.8e-21 104.8 104 51.0
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 5.0e-21 104.4 102 53.9
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 1.1e-20 103.2 102 57.8
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 1.1e-20 103.2 105 54.3
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 1.9e-20 102.4 109 47.7
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.9e-20 102.4 103 52.4
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.6e-19 99.4 118 50.8
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.1e-19 99.0 106 50.9
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 2.1e-19 99.0 106 50.9
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 2.1e-19 99.0 106 50.9
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 2.1e-19 99.0 106 50.9
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 8.0e-19 97.1 103 46.6
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 1.4e-18 96.3 105 45.7
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 3.0e-18 95.1 103 48.5
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 4.0e-18 94.7 108 50.9
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.0e-18 94.7 111 50.5
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.5e-17 92.8 103 45.6
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 4.4e-17 91.3 105 48.6
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 4.4e-17 91.3 108 49.1
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 5.7e-17 90.9 106 49.1
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 5.7e-17 90.9 105 47.6
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 7.5e-17 90.5 106 49.1
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.7e-16 89.4 92 54.3
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.7e-16 89.4 106 48.1
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-16 88.6 67 70.1
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 4.8e-16 87.8 84 57.1
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 8.3e-16 87.0 106 46.2
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-15 86.7 109 46.8
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 1.4e-15 86.3 108 46.3
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 9.1e-15 83.6 105 47.6
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 1.6e-14 82.8 85 54.1
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 5.9e-14 80.9 70 65.7
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 7.7e-14 80.5 81 55.6
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.0e-13 80.1 103 44.7
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.7e-13 79.3 146 39.7
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 2.3e-13 79.0 38 89.5
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 2.3e-13 79.0 50 76.0
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 8.6e-13 77.0 70 58.6
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.5e-12 76.3 80 50.0
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.5e-12 76.3 80 50.0
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 2.5e-12 75.5 83 51.8
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 1.2e-11 73.2 80 45.0
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 3.6e-11 71.6 89 48.3
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 4.7e-11 71.2 38 78.9
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.0e-10 70.1 36 83.3
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.0e-10 68.6 128 29.7
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 6.8e-10 67.4 73 50.7
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 8.8e-10 67.0 108 39.8
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.2e-09 66.6 96 39.6
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 4.4e-09 64.7 108 34.3
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 5.7e-09 64.3 69 52.2
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.8e-09 63.5 50 66.0
DCAR_001330 Daucus carota HOM05D000751 ORTHO05D005618 3.1e-07 58.5 39 74.4
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 4.5e-06 54.7 107 31.8
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 7.8e-06 53.9 110 30.9


User provided reference genes

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