Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G101.22 Capsicum annuum HOM05D005222 ORTHO05D006230 2.7e-35 151.4 72 100.0
PGSC0003DMG400027040 Solanum tuberosum HOM05D005222 ORTHO05D006230 5.3e-23 110.5 79 69.6
CAN.G65.111 Capsicum annuum HOM05D005222 ORTHO05D006230 1.0e-21 106.3 55 90.9
Peaxi162Scf01064g00238 Petunia axillaris HOM05D005222 ORTHO05D006230 3.2e-20 101.3 55 83.6
Peaxi162Scf00516g00032 Petunia axillaris HOM05D005222 ORTHO05D006230 1.6e-19 99.0 55 83.6
FAN08G1832 Fragaria x ananassa HOM05D005222 ORTHO05D006230 2.1e-19 98.6 55 80.0
Nitab4.5_0000033g0050 Nicotiana tabacum HOM05D005222 ORTHO05D006230 2.1e-19 98.6 55 81.8
FAN13G0479 Fragaria x ananassa HOM05D005222 ORTHO05D006230 4.6e-19 97.4 55 78.2
Solyc06g072600.3 Solanum lycopersicum HOM05D005222 ORTHO05D006230 6.1e-19 97.1 55 80.0
Sopen06g028950 Solanum pennellii HOM05D005222 ORTHO05D006230 6.1e-19 97.1 55 80.0
Cfa018742 Carpinus fangiana HOM05D005222 ORTHO05D006230 7.9e-19 96.7 55 78.2
Haze_07194 Corylus avellana HOM05D005222 ORTHO05D006230 7.9e-19 96.7 55 78.2
FvH4_5g08990 Fragaria vesca HOM05D005222 ORTHO05D006230 7.9e-19 96.7 55 78.2
PGR083G1056 Punica granatum HOM05D005222 ORTHO05D006230 1.0e-18 96.3 54 79.6
MBI07_g24748_MAGBIO Magnolia biondii HOM05D005222 ORTHO05D006230 1.3e-18 95.9 55 78.2
RcHm_v2.0_Chr7g0189291 Rosa chinensis HOM05D005222 ORTHO05D006230 1.3e-18 95.9 55 78.2
Sc22g0003810 Simmondsia chinensis HOM05D005222 ORTHO05D006230 1.3e-18 95.9 55 78.2
Ca_16071_v3 Cicer arietinum L. HOM05D005222 ORTHO05D006230 1.8e-18 95.5 55 78.2
Prupe.5G146200 Prunus persica HOM05D005222 ORTHO05D006230 1.8e-18 95.5 55 76.4
Eucgr.B00077 Eucalyptus grandis HOM05D005222 ORTHO05D006230 2.3e-18 95.1 55 78.2
FAN18G1799 Fragaria x ananassa HOM05D005222 ORTHO05D006230 2.3e-18 95.1 55 76.4
HanXRQChr09g0273701 Helianthus annuus HOM05D005222 ORTHO05D006230 2.3e-18 95.1 55 76.4
MD14G1151000 Malus domestica HOM05D005222 ORTHO05D006230 2.3e-18 95.1 55 76.4
Lsat_1_v5_gn_4_83361 Lactuca sativa HOM05D005222 ORTHO05D006230 3.9e-18 94.4 55 76.4
Sc04g0000390 Simmondsia chinensis HOM05D005222 ORTHO05D006230 3.9e-18 94.4 55 76.4
CiPaw.11G003300 Carya illinoinensis HOM05D005222 ORTHO05D006230 5.1e-18 94.0 55 76.4
CDE06G2816 Ceratophyllum demersum HOM05D005222 ORTHO05D006230 6.7e-18 93.6 55 74.5
MD06G1135800 Malus domestica HOM05D005222 ORTHO05D006230 6.7e-18 93.6 55 74.5
CAN.G758.13 Capsicum annuum HOM05D005222 ORTHO05D006230 8.7e-18 93.2 55 74.5
Glyma.06G166600 Glycine max HOM05D005222 ORTHO05D006230 1.1e-17 92.8 55 74.5
Sabra15G0122200 Salix brachista HOM05D005222 ORTHO05D006230 1.1e-17 92.8 55 76.4
ECA232G5061 Erigeron canadensis HOM05D005222 ORTHO05D006230 1.5e-17 92.4 55 74.5
SalBow5G1462 Salvia bowleyana HOM05D005222 ORTHO05D006230 1.5e-17 92.4 51 80.4
MELO3C026182.2 Cucumis melo HOM05D005222 ORTHO05D006230 1.9e-17 92.0 52 76.9
CsaV3_1G000290 Cucumis sativus L. HOM05D005222 ORTHO05D006230 1.9e-17 92.0 52 76.9
FAN04G2766 Fragaria x ananassa HOM05D005222 ORTHO05D006230 1.9e-17 92.0 55 72.7
Nitab4.5_0001464g0100 Nicotiana tabacum HOM05D005222 ORTHO05D006230 1.9e-17 92.0 55 74.5
Hund02474 Selenicereus undatus HOM05D005222 ORTHO05D006230 1.9e-17 92.0 55 74.5
Dinv23190 Davidia involucrata HOM05D005222 ORTHO05D006230 2.5e-17 91.7 55 74.5
Lalb_Chr08g0237411 Lupinus albus HOM05D005222 ORTHO05D006230 2.5e-17 91.7 55 72.7
THA.LOC104811566 Tarenaya hassleriana HOM05D005222 ORTHO05D006230 2.5e-17 91.7 55 74.5
Aa31LG3G7230 Aethionema arabicum HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 74.5
CSS0012412 Camellia sinensis var. sinensis HOM05D005222 ORTHO05D006230 3.3e-17 91.3 53 75.5
Cc04_g09830 Coffea canephora HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 76.4
DCAR_016362 Daucus carota HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 70.9
Glyma.04G198900 Glycine max HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 72.7
Nn3g16353 Nelumbo nucifera HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 72.7
PSO063G7191 Papaver somniferum HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 74.5
PSO782G1904 Papaver somniferum HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 74.5
Phvul.009G163100 Phaseolus vulgaris HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 72.7
Potri.015G102000 Populus trichocarpa HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 74.5
TWI39G0019 Tripterygium wilfordii HOM05D005222 ORTHO05D006230 3.3e-17 91.3 55 74.5
EL10Ac5g11344 Beta vulgaris HOM05D005222 ORTHO05D006230 4.3e-17 90.9 55 72.7
AUR62029544 Chenopodium quinoa HOM05D005222 ORTHO05D006230 4.3e-17 90.9 55 74.5
AUR62034814 Chenopodium quinoa HOM05D005222 ORTHO05D006230 4.3e-17 90.9 55 74.5
ClCG06G018150 Citrullus lanatus HOM05D005222 ORTHO05D006230 4.3e-17 90.9 53 73.6
PGSC0003DMG400004338 Solanum tuberosum HOM05D005222 ORTHO05D006230 4.3e-17 90.9 55 72.7
GSVIVG01008600001 Vitis vinifera HOM05D005222 ORTHO05D006230 4.3e-17 90.9 55 72.7
ATR0582G313 Amborella trichopoda HOM05D005222 ORTHO05D006230 7.4e-17 90.1 53 73.6
CSS0034357 Camellia sinensis var. sinensis HOM05D005222 ORTHO05D006230 7.4e-17 90.1 53 73.6
Lj1g0004473 Lotus japonicus HOM05D005222 ORTHO05D006230 7.4e-17 90.1 55 72.7
Nitab4.5_0011312g0030 Nicotiana tabacum HOM05D005222 ORTHO05D006230 7.4e-17 90.1 53 75.5
Thecc.03G136000 Theobroma cacao HOM05D005222 ORTHO05D006230 7.4e-17 90.1 55 72.7
TWI23G0048 Tripterygium wilfordii HOM05D005222 ORTHO05D006230 7.4e-17 90.1 55 72.7
CSS0000670 Camellia sinensis var. sinensis HOM05D005222 ORTHO05D006230 9.7e-17 89.7 53 73.6
CDE02G1328 Ceratophyllum demersum HOM05D005222 ORTHO05D006230 9.7e-17 89.7 55 70.9
Medtr3g098820 Medicago truncatula HOM05D005222 ORTHO05D006230 9.7e-17 89.7 55 70.9
Actinidia25544 Actinidia chinensis HOM05D005222 ORTHO05D006230 1.3e-16 89.4 53 73.6
Rhsim08G0194200 Rhododendron simsii HOM05D005222 ORTHO05D006230 1.3e-16 89.4 53 71.7
Sopen03g028390 Solanum pennellii HOM05D005222 ORTHO05D006230 1.3e-16 89.4 55 70.9
TAR629G0657 Trochodendron aralioides HOM05D005222 ORTHO05D006230 1.3e-16 89.4 55 70.9
unitig_0.g1255 Utricularia gibba HOM05D005222 ORTHO05D006230 1.3e-16 89.4 51 74.5
Ciclev10033230m.g Citrus clementina HOM05D005222 ORTHO05D006230 1.6e-16 89.0 55 70.9
COL.COLO4_16662 Corchorus olitorius HOM05D005222 ORTHO05D006230 1.6e-16 89.0 55 72.7
Dinv11207 Davidia involucrata HOM05D005222 ORTHO05D006230 1.6e-16 89.0 55 70.9
Duzib205G1725 Durio zibethinus HOM05D005222 ORTHO05D006230 1.6e-16 89.0 55 72.7
Lj4g0026334 Lotus japonicus HOM05D005222 ORTHO05D006230 1.6e-16 89.0 55 70.9
Potri.012G103400 Populus trichocarpa HOM05D005222 ORTHO05D006230 1.6e-16 89.0 55 72.7
QL05p049336 Quercus lobata HOM05D005222 ORTHO05D006230 1.6e-16 89.0 52 75.0
QL10p001732 Quercus lobata HOM05D005222 ORTHO05D006230 1.6e-16 89.0 52 75.0
ClCG04G004850 Citrullus lanatus HOM05D005222 ORTHO05D006230 2.2e-16 88.6 52 73.1
Migut.D01295 Erythranthe guttata HOM05D005222 ORTHO05D006230 2.2e-16 88.6 51 72.5
Manes.06G123800 Manihot esculenta HOM05D005222 ORTHO05D006230 2.8e-16 88.2 55 70.9
CANSAT80G0210 Cannabis sativa HOM05D005222 ORTHO05D006230 4.8e-16 87.4 53 67.9
TPR.G21582 Trifolium pratense HOM05D005222 ORTHO05D006230 4.8e-16 87.4 53 75.5
AL8G24980 Arabidopsis lyrata HOM05D005222 ORTHO05D006230 8.2e-16 86.7 52 71.2
Sabra12G0075900 Salix brachista HOM05D005222 ORTHO05D006230 8.2e-16 86.7 55 70.9
Atru.chr6.1879 Acer truncatum HOM05D005222 ORTHO05D006230 1.1e-15 86.3 52 71.2
arahy.Tifrunner.gnm1.ann1.122S7D Arachis hypogaea HOM05D005222 ORTHO05D006230 1.1e-15 86.3 52 75.0
Hma1.2p1_0168F.1_g074260 Hydrangea macrophylla HOM05D005222 ORTHO05D006230 1.1e-15 86.3 55 67.3
Pp3c22_9040 Physcomitrium patens HOM05D005222 ORTHO05D006230 1.1e-15 86.3 54 68.5
Sp6g12920 Schrenkiella parvula HOM05D005222 ORTHO05D006230 1.1e-15 86.3 52 71.2
arahy.Tifrunner.gnm1.ann1.5QWD0G Arachis hypogaea HOM05D005222 ORTHO05D006230 1.4e-15 85.9 52 75.0
Gohir.A12G192500 Gossypium hirsutum HOM05D005222 ORTHO05D006230 1.4e-15 85.9 55 67.3
Gorai.008G209300 Gossypium raimondii HOM05D005222 ORTHO05D006230 1.4e-15 85.9 55 67.3
Os08g0535600 Oryza sativa ssp. japonica HOM05D005222 ORTHO05D006230 1.4e-15 85.9 51 72.5
Psat5g053520 Pisum sativum HOM05D001135 ORTHO05D006230 1.4e-15 85.9 51 70.6
GSVIVG01033034001 Vitis vinifera HOM05D005222 ORTHO05D006230 1.4e-15 85.9 55 67.3
AT5G50810 Arabidopsis thaliana HOM05D005222 ORTHO05D006230 1.8e-15 85.5 52 71.2
Manes.14G047400 Manihot esculenta HOM05D005222 ORTHO05D006230 1.8e-15 85.5 55 67.3
TAR374G1676 Trochodendron aralioides HOM05D005222 ORTHO05D006230 1.8e-15 85.5 55 67.3
Carub.0008s1080 Capsella rubella HOM05D005222 ORTHO05D006230 2.4e-15 85.1 52 69.2
Pp3c18_15660 Physcomitrium patens HOM05D005222 ORTHO05D006230 2.4e-15 85.1 55 69.1
Rhsim12G0178200 Rhododendron simsii HOM05D005222 ORTHO05D006230 3.1e-15 84.7 53 69.8
Solyc03g097640.3 Solanum lycopersicum HOM05D005222 ORTHO05D006230 3.1e-15 84.7 51 70.6
Duzib084G0042 Durio zibethinus HOM05D005222 ORTHO05D006230 4.1e-15 84.3 55 65.5
Gohir.D12G194600 Gossypium hirsutum HOM05D005222 ORTHO05D006230 4.1e-15 84.3 55 65.5
CARHR257460 Cardamine hirsuta HOM05D005222 ORTHO05D006230 5.3e-15 84.0 49 73.5
vmacro16739 Vaccinium macrocarpon HOM05D005222 ORTHO05D006230 5.3e-15 84.0 53 69.8
Zm00001eb036900 Zea mays HOM05D005222 ORTHO05D006230 5.3e-15 84.0 51 68.6
Mapoly0022s0111 Marchantia polymorpha HOM05D005222 ORTHO05D006230 6.9e-15 83.6 54 66.7
CARHR232420 Cardamine hirsuta HOM05D005222 ORTHO05D006230 9.0e-15 83.2 54 66.7
Aqoxy3G01691 Aquilegia oxysepala HOM05D005222 ORTHO05D006230 1.2e-14 82.8 47 72.3
SEGI_36916 Sequoiadendron giganteum HOM05D005222 ORTHO05D006230 1.5e-14 82.4 53 67.9
VMungo0464G1435 Vigna mungo HOM05D005222 ORTHO05D006230 1.5e-14 82.4 49 71.4
Zm00001eb175490 Zea mays HOM05D005222 ORTHO05D006230 2.0e-14 82.0 51 66.7
Thhalv10015178m.g Eutrema salsugineum HOM05D005222 ORTHO05D006230 7.7e-14 80.1 49 71.4
Glyma.05G202400 Glycine max HOM05D005222 ORTHO05D006230 7.7e-14 80.1 55 61.8
Sc07g0003580 Simmondsia chinensis HOM05D005222 ORTHO05D006230 7.7e-14 80.1 53 64.2
SMO356G0192 Selaginella moellendorffii HOM05D005222 ORTHO05D006230 1.7e-13 79.0 51 64.7
ATR1096G067 Amborella trichopoda HOM05D005222 ORTHO05D006230 3.8e-13 77.8 52 61.5
Aqoxy5G03239 Aquilegia oxysepala HOM05D005222 ORTHO05D006230 6.5e-13 77.0 50 64.0
BcaC08g43896 Brassica carinata HOM05D005222 ORTHO05D006230 6.5e-13 77.0 52 67.3
C06p12810 Brassica napus HOM05D005222 ORTHO05D006230 6.5e-13 77.0 52 67.3
MBI13_g38964_MAGBIO Magnolia biondii HOM05D005222 ORTHO05D006230 8.5e-13 76.6 55 58.2
A03p16580 Brassica napus HOM05D005222 ORTHO05D006230 1.4e-12 75.9 51 64.7
C03p19510 Brassica napus HOM05D005222 ORTHO05D006230 1.4e-12 75.9 51 64.7
BolC3t14332H Brassica oleracea HOM05D005222 ORTHO05D006230 1.4e-12 75.9 51 64.7
BraA03t10945Z Brassica rapa HOM05D005222 ORTHO05D006230 1.4e-12 75.9 51 64.7
BcaNung03992 Brassica carinata HOM05D005222 ORTHO05D006230 4.2e-12 74.3 52 63.5
BcaC09g50823 Brassica carinata HOM05D005222 ORTHO05D006230 5.5e-12 73.9 52 63.5
A01p16290 Brassica napus HOM05D005222 ORTHO05D006230 5.5e-12 73.9 52 63.5
C01p20320 Brassica napus HOM05D005222 ORTHO05D006230 5.5e-12 73.9 52 63.5
BolC1t01961H Brassica oleracea HOM05D005222 ORTHO05D006230 5.5e-12 73.9 52 63.5
BraA01t01568Z Brassica rapa HOM05D005222 ORTHO05D006230 5.5e-12 73.9 52 63.5
Os11g0131700 Oryza sativa ssp. japonica HOM05D005222 ORTHO05D006230 1.2e-11 72.8 49 63.3
Os12g0128600 Oryza sativa ssp. japonica HOM05D005222 ORTHO05D006230 6.1e-11 70.5 49 59.2
Zm00001eb163550 Zea mays HOM05D005222 ORTHO05D006230 1.1e-09 66.2 50 54.0
HPP92_001283 Vanilla planifolia HOM05D005222 ORTHO05D006230 2.5e-09 65.1 51 56.9
Nn7g37129 Nelumbo nucifera HOM05D005222 ORTHO05D006230 4.3e-09 64.3 45 57.8
FvH4_5g07110 Fragaria vesca HOM05D005222 ORTHO05D006230 1.4e-07 59.3 47 55.3
FAN08G2230 Fragaria x ananassa HOM05D005222 ORTHO05D006230 2.6e-06 55.1 53 47.2


User provided reference genes

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