Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G101.16 Capsicum annuum HOM05D004092 ORTHO05D005448 6.7e-249 863.6 453 100.0
CAN.G851.30 Capsicum annuum HOM05D004092 ORTHO05D005448 8.0e-234 813.5 447 95.7
Solyc04g074090.4 Solanum lycopersicum HOM05D004092 ORTHO05D005448 2.3e-212 742.3 447 88.1
Peaxi162Scf00041g01738 Petunia axillaris HOM05D004092 ORTHO05D005448 8.0e-202 707.2 447 84.1
Nitab4.5_0005777g0060 Nicotiana tabacum HOM05D004092 ORTHO05D005448 4.0e-161 572.0 447 71.1
MSTRG.7071 Avicennia marina HOM05D004092 ORTHO05D005448 1.5e-160 570.1 448 68.3
Actinidia35425 Actinidia chinensis HOM05D004092 ORTHO05D005448 2.2e-159 566.2 452 66.8
Hma1.2p1_0334F.1_g128570 Hydrangea macrophylla HOM05D004092 ORTHO05D005448 3.5e-157 558.9 448 67.4
Oeu051991.1 Olea europaea HOM05D004092 ORTHO05D005448 1.8e-156 556.6 448 67.0
CSS0013287 Camellia sinensis var. sinensis HOM05D004092 ORTHO05D005448 5.1e-156 555.1 450 67.1
Nitab4.5_0000232g0210 Nicotiana tabacum HOM05D004092 ORTHO05D005448 2.1e-154 549.7 447 68.7
DCAR_026669 Daucus carota HOM05D004092 ORTHO05D005448 3.7e-154 548.9 447 66.0
QL04p080030 Quercus lobata HOM05D004092 ORTHO05D005448 1.4e-153 547.0 457 64.6
QL04p079824 Quercus lobata HOM05D004092 ORTHO05D005448 1.8e-153 546.6 456 64.5
CiPaw.11G063100 Carya illinoinensis HOM05D004092 ORTHO05D005448 4.5e-152 542.0 451 65.2
Dinv19600 Davidia involucrata HOM05D004092 ORTHO05D005448 2.2e-151 539.7 456 67.1
GSVIVG01036806001 Vitis vinifera HOM05D004092 ORTHO05D005448 2.9e-151 539.3 457 65.4
Prupe.4G136600 Prunus persica HOM05D004092 ORTHO05D005448 4.9e-151 538.5 452 64.6
Sabra05G0079500 Salix brachista HOM05D004092 ORTHO05D005448 4.9e-151 538.5 453 64.0
Cc05_g16260 Coffea canephora HOM05D004092 ORTHO05D005448 8.4e-151 537.7 449 67.3
Potri.005G096900 Populus trichocarpa HOM05D004092 ORTHO05D005448 8.4e-151 537.7 453 64.0
Duzib213G0752 Durio zibethinus HOM05D004092 ORTHO05D005448 1.1e-150 537.3 451 65.0
Thecc.07G169400 Theobroma cacao HOM05D004092 ORTHO05D005448 1.1e-150 537.3 451 65.2
SGA_v2.0_scaffold186G40203 Striga asiatica HOM05D004092 ORTHO05D005448 2.5e-150 536.2 470 63.2
HanXRQChr11g0335681 Helianthus annuus HOM05D004092 ORTHO05D005448 5.5e-150 535.0 454 62.8
Ciclev10004308m.g Citrus clementina HOM05D004092 ORTHO05D005448 9.3e-150 534.3 453 62.9
Migut.M01537 Erythranthe guttata HOM05D004092 ORTHO05D005448 2.3e-148 529.6 448 64.5
Eucgr.E01785 Eucalyptus grandis HOM05D004092 ORTHO05D005448 2.3e-148 529.6 451 63.2
Glyma.12G070100 Glycine max HOM05D004092 ORTHO05D005448 5.1e-148 528.5 454 63.0
Manes.14G011200 Manihot esculenta HOM05D004092 ORTHO05D005448 4.8e-146 521.9 456 62.1
RcHm_v2.0_Chr5g0025821 Rosa chinensis HOM05D004092 ORTHO05D005448 4.8e-146 521.9 452 63.9
Cfa005512 Carpinus fangiana HOM05D004092 ORTHO05D005448 8.2e-146 521.2 452 63.3
Ca_07696_v3 Cicer arietinum L. HOM05D004092 ORTHO05D005448 1.8e-145 520.0 453 61.1
Phvul.011G076150 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 4.1e-145 518.8 452 62.2
Phvul.L001854 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 4.1e-145 518.8 452 62.2
Phvul.L001940 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 4.1e-145 518.8 452 62.2
CANSAT80G2562 Cannabis sativa HOM05D004092 ORTHO05D005448 5.3e-145 518.5 446 63.7
SalBow8G5525 Salvia bowleyana HOM05D004092 ORTHO05D005448 6.9e-145 518.1 445 63.8
ClCG09G022650 Citrullus lanatus HOM05D004092 ORTHO05D005448 2.0e-144 516.5 454 63.2
Lj1g0019540 Lotus japonicus HOM05D004092 ORTHO05D005448 4.5e-144 515.4 451 60.1
ECA236G4689 Erigeron canadensis HOM05D004092 ORTHO05D005448 6.5e-143 511.5 450 62.4
arahy.Tifrunner.gnm1.ann1.7JS6EV Arachis hypogaea HOM05D004092 ORTHO05D005448 1.4e-142 510.4 454 61.0
VMungo1127G2087 Vigna mungo HOM05D004092 ORTHO05D005448 1.4e-142 510.4 456 61.2
arahy.Tifrunner.gnm1.ann1.R5WWIH Arachis hypogaea HOM05D004092 ORTHO05D005448 1.9e-142 510.0 454 61.0
Gohir.A13G122400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 1.9e-142 510.0 453 61.4
SalBow6G4089 Salvia bowleyana HOM05D004092 ORTHO05D005448 1.9e-142 510.0 455 62.4
Lsat_1_v5_gn_7_110180 Lactuca sativa HOM05D004092 ORTHO05D005448 2.5e-142 509.6 455 62.0
Glyma.10G245700 Glycine max HOM05D004092 ORTHO05D005448 5.5e-142 508.4 452 61.9
Gorai.013G141600 Gossypium raimondii HOM05D004092 ORTHO05D005448 7.2e-142 508.1 454 61.7
CsaV3_7G022820 Cucumis sativus L. HOM05D004092 ORTHO05D005448 9.4e-142 507.7 453 61.6
Gohir.D13G126400 Gossypium hirsutum HOM05D004092 ORTHO05D005448 9.4e-142 507.7 454 61.5
SalBow6G0067 Salvia bowleyana HOM05D004092 ORTHO05D005448 9.4e-142 507.7 455 62.2
TWI38G0748 Tripterygium wilfordii HOM05D004092 ORTHO05D005448 9.4e-142 507.7 450 62.0
Atru.chr1.122 Acer truncatum HOM05D004092 ORTHO05D005448 1.2e-141 507.3 454 61.9
MELO3C012616.2 Cucumis melo HOM05D004092 ORTHO05D005448 4.6e-141 505.4 455 62.0
FvH4_3g15370 Fragaria vesca HOM05D004092 ORTHO05D005448 6.1e-141 505.0 458 62.4
Sc08g0008610 Simmondsia chinensis HOM05D004092 ORTHO05D005448 6.1e-141 505.0 452 60.2
COL.COLO4_07946 Corchorus olitorius HOM05D004092 ORTHO05D005448 7.9e-141 504.6 456 61.4
TAR362G1264 Trochodendron aralioides HOM05D004092 ORTHO05D005448 7.9e-141 504.6 452 61.1
Psat3g124440 Pisum sativum HOM05D004092 ORTHO05D005448 1.4e-140 503.8 453 59.6
Lalb_Chr01g0007101 Lupinus albus HOM05D004092 ORTHO05D005448 2.3e-140 503.1 452 60.2
TPR.G6646 Trifolium pratense HOM05D004092 ORTHO05D005448 1.9e-139 500.0 454 60.8
Lalb_Chr03g0031641 Lupinus albus HOM05D004092 ORTHO05D005448 2.5e-139 499.6 451 60.3
MD05G1223600 Malus domestica HOM05D004092 ORTHO05D005448 1.3e-138 497.3 450 61.3
MD10G1205100 Malus domestica HOM05D004092 ORTHO05D005448 1.7e-138 496.9 450 61.6
Medtr7g070240 Medicago truncatula HOM05D004092 ORTHO05D005448 2.8e-138 496.1 454 58.8
Sed0009567 Sechium edule HOM05D004092 ORTHO05D005448 2.8e-138 496.1 453 61.8
Sopen00g013080 Solanum pennellii HOM05D004092 ORTHO05D005448 6.5e-135 485.0 287 89.5
PGR044G0523 Punica granatum HOM05D004092 ORTHO05D005448 2.7e-133 479.6 457 60.0
Sp5g34210 Schrenkiella parvula HOM05D004092 ORTHO05D005448 1.0e-132 477.6 447 57.3
AUR62026892 Chenopodium quinoa HOM05D004092 ORTHO05D005448 3.0e-132 476.1 442 60.4
FAN11G0738 Fragaria x ananassa HOM05D004092 ORTHO05D005448 3.0e-132 476.1 439 62.2
Carub.0002s2602 Capsella rubella HOM05D004092 ORTHO05D005448 6.7e-132 474.9 447 57.7
FAN16G3313 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.3e-130 470.7 439 62.0
Aa31LG4G1850 Aethionema arabicum HOM05D004092 ORTHO05D005448 2.2e-130 469.9 452 56.2
CDE01G0334 Ceratophyllum demersum HOM05D004092 ORTHO05D005448 4.8e-130 468.8 456 57.0
MBI18_g01899_MAGBIO Magnolia biondii HOM05D004092 ORTHO05D005448 8.2e-130 468.0 457 60.0
AL2G39620 Arabidopsis lyrata HOM05D004092 ORTHO05D005448 1.4e-129 467.2 447 55.9
AT1G79150 Arabidopsis thaliana HOM05D004092 ORTHO05D005448 1.8e-129 466.8 451 56.5
Aqoxy3G03661 Aquilegia oxysepala HOM05D004092 ORTHO05D005448 5.3e-129 465.3 454 58.6
CARHR072800 Cardamine hirsuta HOM05D004092 ORTHO05D005448 9.1e-129 464.5 445 56.6
Lju337C5G4 Lonicera japonica HOM05D004092 ORTHO05D005448 9.1e-129 464.5 432 62.0
FAN25G1415 Fragaria x ananassa HOM05D004092 ORTHO05D005448 1.5e-128 463.8 439 60.6
BcaC08g47477 Brassica carinata HOM05D004092 ORTHO05D005448 2.9e-127 459.5 447 56.8
C06p53020 Brassica napus HOM05D004092 ORTHO05D005448 2.9e-127 459.5 447 56.8
BolC6t40319H Brassica oleracea HOM05D004092 ORTHO05D005448 8.5e-127 458.0 447 56.4
THA.LOC104808127 Tarenaya hassleriana HOM05D004092 ORTHO05D005448 1.1e-126 457.6 454 56.2
A07p44270 Brassica napus HOM05D004092 ORTHO05D005448 1.9e-126 456.8 447 56.2
BraA07t31936Z Brassica rapa HOM05D004092 ORTHO05D005448 1.9e-126 456.8 447 56.2
PSO063G0010 Papaver somniferum HOM05D004092 ORTHO05D005448 1.2e-125 454.1 458 55.0
EL10Ac2g03277 Beta vulgaris HOM05D004092 ORTHO05D005448 5.2e-124 448.7 489 54.8
BcaNung04898 Brassica carinata HOM05D004092 ORTHO05D005448 2.6e-123 446.4 400 59.5
ATR0763G063 Amborella trichopoda HOM05D004092 ORTHO05D005448 2.2e-122 443.4 451 55.4
PSO782G4649 Papaver somniferum HOM05D004092 ORTHO05D005448 2.2e-122 443.4 455 53.8
AUR62016815 Chenopodium quinoa HOM05D004092 ORTHO05D005448 4.8e-122 442.2 446 56.5
BcaB02g08669 Brassica carinata HOM05D004092 ORTHO05D005448 5.3e-121 438.7 449 54.3
Zm00001eb020130 Zea mays HOM05D004092 ORTHO05D005448 4.5e-120 435.6 452 54.6
Cpa.g.sc4.30 Carica papaya HOM05D004092 ORTHO05D005448 1.1e-118 431.0 355 65.1
Os06g0498500 Oryza sativa ssp. japonica HOM05D004092 ORTHO05D005448 9.4e-118 427.9 454 54.4
HPP92_004307 Vanilla planifolia HOM05D004092 ORTHO05D005448 2.1e-117 426.8 455 54.3
vmacro09775 Vaccinium macrocarpon HOM05D004092 ORTHO05D005448 5.9e-112 408.7 543 47.7
SEGI_30171 Sequoiadendron giganteum HOM05D004092 ORTHO05D005448 4.2e-110 402.5 457 49.7
Thhalv10018125m.g Eutrema salsugineum HOM05D004092 ORTHO05D005448 4.4e-99 365.9 318 60.1
AagrBONN_evm.TU.Sc2ySwM_117.3368 Anthoceros agrestis HOM05D004092 ORTHO05D005448 6.4e-90 335.5 454 43.4
Nn5g27645 Nelumbo nucifera HOM05D004092 ORTHO05D005448 1.2e-88 331.3 447 46.8
SMO169G0313 Selaginella moellendorffii HOM05D004092 ORTHO05D005448 2.8e-77 293.5 471 42.0
Mapoly0001s0281 Marchantia polymorpha HOM05D004092 ORTHO05D005448 2.2e-74 283.9 450 41.3
Pp3c3_9760 Physcomitrium patens HOM05D004092 ORTHO05D005448 3.7e-74 283.1 468 39.1
Rhsim04G0123500 Rhododendron simsii HOM05D004092 ORTHO05D005448 1.3e-71 274.6 233 60.9
Haze_01706 Corylus avellana HOM05D004092 ORTHO05D005448 5.1e-71 272.7 219 68.9
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 1.9e-70 270.8 219 68.0
unitig_32.g11083 Utricularia gibba HOM05D004092 ORTHO05D005448 5.6e-70 269.2 231 59.7
CBR_g30814 Chara braunii HOM05D004092 ORTHO05D005448 1.5e-62 244.6 443 37.2
SHI21022 Sapria himalayana HOM05D004092 ORTHO05D005448 3.1e-60 236.9 195 65.1
unitig_32.g11084 Utricularia gibba HOM05D004092 ORTHO05D005448 2.5e-54 217.2 197 60.9
Sopen00g012990 Solanum pennellii HOM05D004092 ORTHO05D005448 1.3e-53 214.9 140 82.9
Lsat_1_v5_gn_2_21921 Lactuca sativa HOM05D004092 ORTHO05D005448 1.8e-52 211.1 147 71.4
Phvul.011G073301 Phaseolus vulgaris HOM05D004092 ORTHO05D005448 1.6e-45 188.0 172 60.5
SalBow7G2721 Salvia bowleyana HOM05D004092 ORTHO05D005448 4.2e-41 173.3 153 60.8
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 7.1e-41 172.6 205 51.2
Haze_01705 Corylus avellana HOM05D004092 ORTHO05D005448 3.5e-40 170.2 171 55.0
Eucgr.G02299 Eucalyptus grandis HOM05D004092 ORTHO05D005448 1.0e-39 168.7 214 46.3
Psat1g207400 Pisum sativum HOM05D004092 ORTHO05D005448 3.9e-39 166.8 170 56.5
Eucgr.F00934 Eucalyptus grandis HOM05D004092 ORTHO05D005448 6.2e-37 159.5 227 41.9
SalBow1G6550 Salvia bowleyana HOM05D004092 ORTHO05D005448 6.7e-31 139.4 179 46.4
Rhsim04G0004800 Rhododendron simsii HOM05D004092 ORTHO05D005448 1.3e-29 135.2 117 59.0
MCO10G157 Micromonas commoda HOM05D004092 ORTHO05D005448 2.0e-27 127.9 453 28.3
Glyma.11G148802 Glycine max HOM05D004092 ORTHO05D016651 9.7e-22 109.0 102 55.9
Cre16.g659600 Chlamydomonas reinhardtii HOM05D004092 ORTHO05D005448 4.4e-14 83.6 440 23.0
Actinidia37123 Actinidia chinensis HOM05D004092 ORTHO05D005448 9.1e-12 75.9 115 46.1
ECA232G3953 Erigeron canadensis HOM05D015936 ORTHO05D022524 2.9e-10 70.9 65 58.5
arahy.Tifrunner.gnm1.ann1.83PK1U Arachis hypogaea HOM05D004092 ORTHO05D016651 1.5e-09 68.6 75 49.3
PRCOL_00003431 Prasinoderma coloniale HOM05D004092 ORTHO05D005448 2.6e-06 57.8 344 23.3
RhsimUnG0180500 Rhododendron simsii HOM05D004092 ORTHO05D005448 4.4e-06 57.0 117 32.5
Actinidia37122 Actinidia chinensis HOM05D004092 ORTHO05D005448 9.7e-06 55.8 135 35.6


User provided reference genes

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