Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 0.0e+00 2283.1 1287 100.0
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 0.0e+00 1699.5 1374 71.0
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 0.0e+00 1674.1 1372 70.7
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 0.0e+00 1452.2 1439 59.7
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 0.0e+00 1232.6 1050 67.0
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 0.0e+00 1159.8 1104 65.8
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.8e-302 1043.1 1035 63.8
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 9.7e-160 568.9 1479 38.3
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 4.1e-158 563.5 1610 35.6
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 4.1e-158 563.5 1610 35.6
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 4.1e-158 563.5 1610 35.6
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 7.2e-155 552.7 1679 36.0
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 8.8e-153 545.8 1445 37.0
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 2.1e-146 524.6 1377 36.5
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 2.2e-143 514.6 1571 36.5
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 1.3e-135 488.8 1495 36.2
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 6.1e-130 469.9 1410 36.2
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 1.0e-129 469.2 1539 34.6
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 3.4e-128 464.2 1370 35.3
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 1.3e-127 462.2 1565 34.7
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 6.4e-127 459.9 1401 37.3
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 1.3e-124 452.2 1377 35.5
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 1.1e-123 449.1 1520 33.4
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 7.3e-123 446.4 1488 34.9
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 9.5e-123 446.0 1416 36.3
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 1.4e-121 442.2 1418 34.8
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 2.4e-118 431.4 1344 38.3
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 1.0e-116 426.0 1281 36.4
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 3.0e-116 424.5 1520 33.2
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 1.5e-115 422.2 1498 34.6
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 9.5e-115 419.5 1604 32.4
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.6e-114 418.7 1399 34.6
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 4.7e-114 417.2 1526 35.0
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 4.0e-113 414.1 1500 33.7
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 5.2e-113 413.7 1419 33.7
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 5.2e-113 413.7 1731 32.4
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.9e-111 407.9 1437 33.0
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 6.4e-111 406.8 1469 34.4
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 2.4e-110 404.8 1332 35.1
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 3.5e-109 401.0 1394 34.1
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 4.6e-109 400.6 1469 32.2
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 7.8e-109 399.8 1441 33.4
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.5e-107 395.6 1389 38.4
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 8.9e-105 386.3 1342 34.6
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 1.5e-104 385.6 1555 32.5
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 1.5e-104 385.6 1492 33.4
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.0e-104 385.2 1458 31.4
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 3.4e-104 384.4 1414 32.7
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 5.8e-104 383.6 1461 33.7
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 1.3e-103 382.5 1369 37.1
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.3e-103 382.5 1431 32.8
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 1.7e-103 382.1 1520 34.4
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 4.6e-101 374.0 1590 33.7
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 7.8e-101 373.2 1516 33.8
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 1.0e-100 372.9 1369 36.4
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 2.3e-100 371.7 1386 33.6
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 2.1e-98 365.2 1355 35.2
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 4.7e-98 364.0 1753 31.9
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 4.4e-96 357.5 1545 33.7
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 1.9e-94 352.1 1402 33.0
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 3.2e-94 351.3 1305 36.5
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 7.1e-94 350.1 1361 35.2
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 1.7e-92 345.5 1488 34.4
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 2.3e-92 345.1 1406 33.4
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 7.3e-91 340.1 1698 33.3
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.1e-89 336.3 1793 31.2
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 1.4e-89 335.9 1355 36.4
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.0e-88 332.0 1415 33.3
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 2.0e-88 332.0 1281 35.3
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 1.1e-86 326.2 1392 35.5
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 2.4e-86 325.1 1482 33.7
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 1.8e-84 318.9 1389 31.9
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.6e-82 312.4 898 41.6
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 1.8e-81 308.9 1342 35.3
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 9.0e-81 306.6 1302 30.4
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 2.6e-80 305.1 1150 29.5
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 3.8e-79 301.2 831 40.4
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 1.8e-76 292.4 1335 32.8
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 2.2e-71 275.4 1076 30.3
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 2.9e-71 275.0 1288 30.1
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 7.1e-70 270.4 1269 27.7
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.2e-69 269.6 225 59.1
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 6.9e-65 253.8 709 44.0
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 3.4e-64 251.5 1497 26.3
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 1.3e-63 249.6 175 65.1
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.7e-63 249.2 533 36.2
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 3.8e-63 248.1 684 43.0
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 1.1e-62 246.5 198 60.1
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 1.5e-59 236.1 175 62.9
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 2.6e-56 225.3 520 35.0
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 1.0e-55 223.4 140 67.9
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 6.5e-55 220.7 1663 30.5
Oeu017421.1 Olea europaea HOM05D005457 ORTHO05D006350 1.4e-52 213.0 491 33.8
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 5.9e-48 197.6 1339 27.3
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 1.1e-46 193.4 1099 27.0
RcHm_v2.0_Chr5g0067361 Rosa chinensis HOM05D005457 ORTHO05D006350 1.1e-46 193.4 364 36.0
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 7.2e-46 190.7 1014 27.2
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 6.1e-45 187.6 1109 27.1
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 2.3e-44 185.7 1119 24.5
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 1.3e-42 179.9 183 51.4
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 2.8e-42 178.7 242 43.8
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 5.3e-41 174.5 112 63.4
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 7.0e-41 174.1 429 33.8
Psat5g196760 Pisum sativum HOM05D005457 ORTHO05D002728 2.0e-40 172.6 166 53.6
Actinidia25125 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.8e-39 168.3 96 74.0
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 2.3e-36 159.1 477 31.4
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 2.6e-35 155.6 641 29.2
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 5.7e-35 154.5 171 45.6
Cpa.g.sc112.91 Carica papaya HOM05D005457 ORTHO05D006350 1.0e-31 143.7 118 59.3
SEGI_21152 Sequoiadendron giganteum HOM05D005457 ORTHO05D006350 1.7e-31 142.9 176 46.0
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 5.0e-31 141.4 152 48.7
Prupe.6G064700 Prunus persica HOM05D005457 ORTHO05D006350 1.9e-30 139.4 683 33.8
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 3.6e-29 135.2 204 41.2
Nitab4.5_0006476g0020 Nicotiana tabacum HOM05D005457 ORTHO05D006350 6.8e-28 131.0 80 75.0
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 9.8e-27 127.1 460 29.1
CDE09G0768 Ceratophyllum demersum HOM05D005457 ORTHO05D006350 2.4e-25 122.5 140 49.3
CSS0043795 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 3.1e-25 122.1 85 63.5
CSS0046602 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 3.1e-25 122.1 85 63.5
Duzib170G0589 Durio zibethinus HOM05D005457 ORTHO05D006350 3.2e-22 112.1 302 33.1
CDE02G3816 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 9.8e-19 100.5 180 38.3
unitig_27.g24807 Utricularia gibba HOM05D005457 ORTHO05D006350 2.4e-17 95.9 157 38.9
CBR_g49555 Chara braunii HOM05D005457 ORTHO05D006350 2.0e-16 92.8 140 27.9
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 1.3e-15 90.1 48 77.1
CBR_g34582 Chara braunii HOM05D005457 ORTHO05D006350 2.5e-14 85.9 97 39.2
CBR_g44392 Chara braunii HOM05D005457 ORTHO05D006350 2.5e-14 85.9 114 36.0
PGSC0003DMG400009632 Solanum tuberosum HOM05D005457 ORTHO05D006350 5.6e-14 84.7 44 93.2
CBR_g34581 Chara braunii HOM05D005457 ORTHO05D006350 1.6e-13 83.2 131 29.8
CBR_g34583 Chara braunii HOM05D005457 ORTHO05D006350 6.1e-13 81.3 96 37.5
CBR_g29779 Chara braunii HOM05D005457 ORTHO05D006350 1.0e-12 80.5 213 26.8
unitig_27.g24810 Utricularia gibba HOM05D005457 ORTHO05D006350 3.4e-11 75.5 97 41.2


User provided reference genes

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