Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1001.42 Capsicum annuum HOM05D004909 ORTHO05D009625 4.7e-288 993.8 495 100.0
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 1.6e-107 394.0 253 78.3
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 1.8e-106 390.6 253 77.5
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.1e-103 381.3 273 72.2
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.5e-84 317.8 273 63.4
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 1.1e-58 231.9 251 48.6
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 5.9e-57 226.1 240 49.2
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 5.9e-57 226.1 240 49.2
CAN.G335.18 Capsicum annuum HOM05D004909 ORTHO05D009625 4.0e-53 213.4 129 82.2
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 2.4e-50 204.1 249 45.0
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 4.6e-49 199.9 146 68.5
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 1.1e-45 188.7 260 39.6
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 6.6e-40 169.5 196 46.4
EL10Ac1g02203 Beta vulgaris HOM05D004909 ORTHO05D009625 1.5e-39 168.3 257 39.3
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 2.3e-37 161.0 201 43.8
Hma1.2p1_0295F.1_g116730 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 2.6e-36 157.5 218 39.0
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 1.3e-35 155.2 184 45.7
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 2.9e-35 154.1 230 42.2
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 1.4e-34 151.8 250 38.0
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 3.0e-32 144.1 269 36.1
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 3.3e-31 140.6 243 39.5
SHI49389 Sapria himalayana HOM05D004909 ORTHO05D009625 2.1e-30 137.9 175 45.1
SHI49457 Sapria himalayana HOM05D004909 ORTHO05D009625 2.1e-30 137.9 174 46.6
SHI35986 Sapria himalayana HOM05D004909 ORTHO05D009625 2.4e-29 134.4 215 40.5
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.9e-29 132.5 205 42.4
SHI41761 Sapria himalayana HOM05D004909 ORTHO05D009625 1.9e-26 124.8 180 42.2
RcHm_v2.0_MTg0498751 Rosa chinensis HOM05D004909 ORTHO05D009625 7.1e-26 122.9 188 37.2
SHI40430 Sapria himalayana HOM05D004909 ORTHO05D009625 1.1e-23 115.5 213 36.6
EL10As7g23793 Beta vulgaris HOM05D004909 ORTHO05D009928 4.0e-21 107.1 147 38.8
SHI43987 Sapria himalayana HOM05D004909 ORTHO05D009625 1.2e-20 105.5 128 49.2
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 2.0e-20 104.8 152 40.8
CsaV3_UNG207880 Cucumis sativus L. HOM05D004909 ORTHO05D009625 5.8e-20 103.2 227 34.8
CAN.G1180.18 Capsicum annuum HOM05D025468 ORTHO05D019542 1.6e-14 85.1 47 89.4
SHI35576 Sapria himalayana HOM05D004909 ORTHO05D009625 2.1e-14 84.7 93 50.5
CAN.G82.5 Capsicum annuum HOM05D025468 ORTHO05D019542 2.8e-14 84.3 47 87.2
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 2.8e-14 84.3 168 36.9
CAN.G438.81 Capsicum annuum HOM05D025468 ORTHO05D019542 7.6e-12 76.3 47 85.1
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 6.4e-11 73.2 71 54.9
SGA_v2.0_scaffold119G32792 Striga asiatica HOM05D004909 ORTHO05D009625 6.4e-11 73.2 70 54.3
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 7.1e-10 69.7 107 38.3
SHI51920 Sapria himalayana HOM05D009967 ORTHO05D009625 6.0e-09 66.6 56 57.1
SHI39947 Sapria himalayana HOM05D004909 ORTHO05D009625 1.3e-08 65.5 113 37.2
CAN.G1.9 Capsicum annuum HOM05D025468 ORTHO05D019542 2.3e-08 64.7 34 91.2
SGA_v2.0_scaffold255G45542 Striga asiatica HOM05D004909 ORTHO05D009625 3.9e-08 63.9 123 35.8
SHI29964 Sapria himalayana HOM05D004909 ORTHO05D009625 1.1e-07 62.4 115 37.4
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 5.6e-07 60.1 76 44.7
Duzib116G0563 Durio zibethinus HOM05D004909 ORTHO05D009625 1.6e-06 58.5 67 47.8


User provided reference genes

Program Settings