Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1001.36 Capsicum annuum HOM05D003666 ORTHO05D004770 5.6e-40 167.2 84 100.0
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 1.0e-33 146.4 84 89.3
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.0e-33 146.4 84 89.3
Sopen11g018270 Solanum pennellii HOM05D003666 ORTHO05D004770 1.0e-33 146.4 84 89.3
CAN.G1.7 Capsicum annuum HOM05D003666 ORTHO05D004770 1.3e-33 146.0 84 86.9
Peaxi162Scf01767g00002 Petunia axillaris HOM05D003666 ORTHO05D004770 1.7e-33 145.6 82 90.2
Solyc00g500187.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 5.0e-33 144.1 81 90.1
Solyc00g500251.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 5.0e-33 144.1 81 90.1
AL3G44310 Arabidopsis lyrata HOM05D003666 ORTHO05D004770 2.5e-32 141.7 84 86.9
CAN.G65.28 Capsicum annuum HOM05D003666 ORTHO05D004770 3.3e-32 141.4 84 86.9
Hma1.2p1_0257F.1_g103600 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 3.3e-32 141.4 82 87.8
Nn1g09940 Nelumbo nucifera HOM05D003666 ORTHO05D004770 3.3e-32 141.4 84 86.9
RcHm_v2.0_MTg0498651 Rosa chinensis HOM05D003666 ORTHO05D004770 4.3e-32 141.0 82 87.8
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 4.3e-32 141.0 81 87.7
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.3e-32 140.2 84 85.7
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.3e-32 140.2 84 85.7
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 7.3e-32 140.2 84 85.7
Lalb_Chr00c24g0407361 Lupinus albus HOM05D003666 ORTHO05D004770 9.5e-32 139.8 84 85.7
Lalb_Chr01g0010981 Lupinus albus HOM05D003666 ORTHO05D004770 9.5e-32 139.8 84 85.7
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 1.2e-31 139.4 78 91.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 1.2e-31 139.4 83 85.5
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 1.2e-31 139.4 83 85.5
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 1.6e-31 139.0 84 85.7
Aa31csc553G50 Aethionema arabicum HOM05D003666 ORTHO05D004770 2.8e-31 138.3 82 86.6
CAN.G85.17 Capsicum annuum HOM05D003666 ORTHO05D004770 2.8e-31 138.3 84 84.5
Peaxi162Scf00530g00005 Petunia axillaris HOM05D003666 ORTHO05D004770 2.8e-31 138.3 81 87.7
arahy.Tifrunner.gnm1.ann1.DQZY30 Arachis hypogaea HOM05D003666 ORTHO05D004770 1.1e-30 136.3 82 85.4
arahy.Tifrunner.gnm1.ann1.G61VPX Arachis hypogaea HOM05D003666 ORTHO05D004770 1.1e-30 136.3 82 85.4
Medtr0082s0060 Medicago truncatula HOM05D003666 ORTHO05D004770 1.4e-30 136.0 82 85.4
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 1.4e-30 136.0 78 88.5
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.1e-30 134.8 78 88.5
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 4.0e-30 134.4 78 88.5
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 6.8e-30 133.7 81 84.0
Nitab4.5_0000172g0090 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.2e-29 132.9 81 85.2
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.5e-29 132.5 78 87.2
Lalb_Chr06g0172221 Lupinus albus HOM05D003666 ORTHO05D004770 4.4e-29 131.0 84 81.0
Nitab4.5_0006085g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 9.8e-29 129.8 81 81.5
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 1.3e-28 129.4 78 85.9
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 1.3e-28 129.4 78 85.9
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 2.9e-28 128.3 76 86.8
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 2.9e-28 128.3 76 86.8
SEGI_24024 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 4.9e-28 127.5 82 76.8
SEGI_34311 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 4.9e-28 127.5 82 76.8
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 6.4e-28 127.1 78 84.6
Lalb_Chr06g0172341 Lupinus albus HOM05D003666 ORTHO05D004770 6.4e-28 127.1 80 81.2
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 8.3e-28 126.7 76 86.8
Psat4g185400 Pisum sativum HOM05D003666 ORTHO05D004770 2.7e-26 121.7 82 75.6
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 1.0e-25 119.8 71 84.5
SHI21047 Sapria himalayana HOM05D003666 ORTHO05D004770 3.1e-22 108.2 84 70.2
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.9e-20 101.7 82 68.3
Gohir.A12G076865 Gossypium hirsutum HOM05D003666 ORTHO05D004770 2.7e-18 95.1 58 84.5
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.9e-16 89.0 63 73.0
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 2.8e-15 85.1 52 84.6
Nitab4.5_0001788g0230 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.6e-15 84.7 49 89.8
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 2.0e-13 79.0 47 87.2
Solyc10g062000.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.9e-12 75.1 53 71.7
SHI36045 Sapria himalayana HOM05D003666 ORTHO05D004770 1.6e-10 69.3 40 80.0
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 2.5e-08 62.0 41 82.9
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 9.6e-08 60.1 74 40.5
arahy.Tifrunner.gnm1.ann1.A5I0RB Arachis hypogaea HOM05D003666 ORTHO05D004770 1.2e-07 59.7 37 83.8
SHI01159 Sapria himalayana HOM05D003666 ORTHO05D004770 4.7e-07 57.8 55 56.4


User provided reference genes

Program Settings