Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.8e-64 248.4 124 100.0
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 4.6e-59 231.1 124 89.5
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 3.9e-58 228.0 124 88.7
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 3.9e-58 228.0 124 88.7
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 2.5e-57 225.3 124 87.9
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.7e-49 196.8 113 84.1
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.5e-46 189.5 109 84.4
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 7.2e-36 154.1 117 63.2
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 2.7e-35 152.1 120 61.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 3.6e-35 151.8 120 61.7
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 3.6e-35 151.8 121 62.8
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 4.7e-35 151.4 119 63.0
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 7.9e-35 150.6 119 63.0
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.0e-34 150.2 126 62.7
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.4e-34 149.8 124 62.9
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.8e-34 149.4 125 60.8
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.3e-34 149.1 121 62.0
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 3.9e-34 148.3 120 63.3
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 3.9e-34 148.3 129 58.9
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 6.7e-34 147.5 131 59.5
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 6.7e-34 147.5 126 59.5
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 1.1e-33 146.7 119 61.3
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.5e-33 146.4 126 61.1
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 2.6e-33 145.6 125 59.2
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 2.6e-33 145.6 120 60.0
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 4.4e-33 144.8 121 62.8
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 4.4e-33 144.8 113 62.8
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 5.7e-33 144.4 119 61.3
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 5.7e-33 144.4 119 61.3
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 5.7e-33 144.4 120 60.0
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 7.4e-33 144.1 120 59.2
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.3e-32 143.3 126 58.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 2.2e-32 142.5 128 59.4
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 2.8e-32 142.1 126 59.5
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.8e-32 142.1 120 56.7
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 2.8e-32 142.1 115 62.6
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 4.8e-32 141.4 120 59.2
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 8.2e-32 140.6 119 61.3
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 1.1e-31 140.2 123 62.6
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.8e-31 139.4 111 62.2
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.8e-31 139.4 118 61.0
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 1.8e-31 139.4 122 59.0
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 2.4e-31 139.0 129 55.0
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 2.4e-31 139.0 121 57.9
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.4e-31 139.0 113 57.5
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 2.4e-31 139.0 120 57.5
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 3.1e-31 138.7 122 57.4
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 7.0e-31 137.5 113 60.2
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 9.1e-31 137.1 122 55.7
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 9.1e-31 137.1 114 63.2
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.6e-30 136.3 112 58.9
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.6e-30 136.3 138 52.9
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 1.6e-30 136.3 127 54.3
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 2.0e-30 136.0 123 56.9
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 2.6e-30 135.6 110 56.4
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 2.6e-30 135.6 110 56.4
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 2.6e-30 135.6 110 56.4
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.6e-30 135.6 128 55.5
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 3.5e-30 135.2 127 52.8
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 3.5e-30 135.2 116 54.3
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 4.5e-30 134.8 119 56.3
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 5.9e-30 134.4 110 60.9
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 5.9e-30 134.4 111 60.4
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 7.7e-30 134.0 128 54.7
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.7e-30 134.0 128 54.7
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.0e-29 133.7 113 59.3
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.3e-29 133.3 110 54.5
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.3e-29 133.3 118 51.7
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 1.3e-29 133.3 127 52.8
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.7e-29 132.9 113 56.6
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.7e-29 132.9 113 56.6
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 2.2e-29 132.5 110 53.6
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 2.2e-29 132.5 110 55.5
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.2e-29 132.5 127 54.3
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.2e-29 132.5 117 55.6
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 3.8e-29 131.7 110 55.5
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.8e-29 131.7 113 55.8
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 3.8e-29 131.7 119 53.8
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 3.8e-29 131.7 120 55.8
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 5.0e-29 131.3 126 54.8
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 1.1e-28 130.2 119 58.0
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.5e-28 129.8 123 55.3
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.5e-28 129.8 110 54.5
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.5e-28 129.8 110 54.5
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.5e-28 129.8 121 58.7
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 4.2e-28 128.3 125 52.8
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 5.5e-28 127.9 110 53.6
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 7.2e-28 127.5 123 54.5
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 7.2e-28 127.5 121 54.5
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 7.2e-28 127.5 122 54.9
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.2e-28 127.5 113 51.3
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 7.2e-28 127.5 113 51.3
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 9.4e-28 127.1 121 55.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.1e-27 125.9 130 53.1
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 3.6e-27 125.2 121 53.7
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 6.1e-27 124.4 123 53.7
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 8.0e-27 124.0 124 51.6
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 8.0e-27 124.0 113 58.4
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 8.0e-27 124.0 113 58.4
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 6.7e-26 120.9 114 55.3
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 7.5e-25 117.5 103 59.2
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 2.2e-24 115.9 122 47.5
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.2e-24 115.9 121 47.9
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.7e-24 115.2 105 50.5
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 1.8e-23 112.8 126 52.4
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 5.0e-21 104.8 127 52.0
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.8e-16 89.0 75 56.0
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 6.3e-16 87.8 66 63.6
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 2.0e-09 66.2 127 33.9
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 5.7e-09 64.7 120 34.2


User provided reference genes

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