Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 9.7e-107 390.2 201 100.0
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 1.2e-45 187.2 117 83.8
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 2.8e-45 186.0 117 85.5
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 2.8e-45 186.0 117 85.5
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 4.4e-43 178.7 117 77.8
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 5.8e-43 178.3 117 80.3
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 7.5e-43 177.9 117 77.8
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 2.9e-42 176.0 117 77.8
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 1.1e-41 174.1 113 80.5
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.4e-41 173.7 112 80.4
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 1.9e-41 173.3 117 76.9
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.9e-41 173.3 120 75.0
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 2.4e-41 172.9 113 79.6
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.2e-41 172.6 120 75.8
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 5.4e-41 171.8 117 76.9
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 7.0e-41 171.4 117 76.9
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 9.2e-41 171.0 120 75.8
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 1.2e-40 170.6 117 78.6
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 1.6e-40 170.2 113 78.8
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 1.6e-40 170.2 117 75.2
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 4.6e-40 168.7 120 75.0
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 4.6e-40 168.7 114 77.2
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 7.8e-40 167.9 117 73.5
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 7.8e-40 167.9 120 75.0
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 1.0e-39 167.5 117 75.2
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 1.3e-39 167.2 120 74.2
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 1.7e-39 166.8 117 73.5
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 1.7e-39 166.8 117 72.6
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 1.7e-39 166.8 120 73.3
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 2.3e-39 166.4 120 75.0
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 3.0e-39 166.0 117 75.2
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 3.0e-39 166.0 123 70.7
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.0e-39 166.0 117 75.2
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 3.9e-39 165.6 117 75.2
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 5.1e-39 165.2 120 74.2
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 5.1e-39 165.2 120 74.2
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 6.6e-39 164.9 117 74.4
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 8.6e-39 164.5 122 70.5
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 8.6e-39 164.5 120 74.2
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 1.1e-38 164.1 117 75.2
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 1.5e-38 163.7 117 74.4
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 1.5e-38 163.7 122 73.0
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 1.9e-38 163.3 120 71.7
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.5e-38 162.9 122 70.5
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 2.5e-38 162.9 119 72.3
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 2.5e-38 162.9 117 71.8
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 3.3e-38 162.5 120 70.8
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.3e-38 162.5 122 70.5
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 3.3e-38 162.5 114 74.6
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 4.3e-38 162.2 120 72.5
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 5.6e-38 161.8 118 69.5
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 5.6e-38 161.8 117 72.6
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 5.6e-38 161.8 117 70.1
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 5.6e-38 161.8 116 74.1
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 7.3e-38 161.4 117 72.6
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.6e-37 160.2 121 71.1
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 2.1e-37 159.8 113 73.5
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 2.1e-37 159.8 119 72.3
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 2.8e-37 159.5 117 72.6
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 3.6e-37 159.1 121 70.2
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 3.6e-37 159.1 117 69.2
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 3.6e-37 159.1 120 71.7
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 6.2e-37 158.3 121 70.2
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 6.2e-37 158.3 110 74.5
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 8.1e-37 157.9 133 63.9
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 1.1e-36 157.5 140 64.3
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 1.4e-36 157.1 113 71.7
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 2.3e-36 156.4 119 71.4
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 3.1e-36 156.0 117 72.6
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 3.1e-36 156.0 121 69.4
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 6.8e-36 154.8 112 73.2
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 6.8e-36 154.8 117 70.1
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 6.8e-36 154.8 120 70.0
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 6.8e-36 154.8 133 63.9
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.2e-35 154.1 117 68.4
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 1.5e-35 153.7 112 74.1
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 2.0e-35 153.3 115 72.2
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 2.6e-35 152.9 117 72.6
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 3.4e-35 152.5 109 75.2
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 3.4e-35 152.5 109 75.2
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 3.4e-35 152.5 114 71.9
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 7.5e-35 151.4 108 76.9
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 1.3e-34 150.6 122 69.7
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 2.2e-34 149.8 108 75.0
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 2.2e-34 149.8 108 75.0
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 2.9e-34 149.4 106 75.5
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 2.9e-34 149.4 106 75.5
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.9e-34 149.4 140 60.7
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 8.3e-34 147.9 118 67.8
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 1.4e-33 147.1 124 65.3
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 1.9e-33 146.7 117 70.1
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 2.4e-33 146.4 119 66.4
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 3.2e-33 146.0 114 70.2
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 3.2e-33 146.0 114 70.2
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 4.1e-33 145.6 118 64.4
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 1.6e-32 143.7 108 70.4
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 2.7e-32 142.9 106 70.8
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 1.6e-29 133.7 117 62.4
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.4e-28 129.8 104 65.4
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.2e-25 119.4 91 67.0
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 1.6e-24 117.1 82 73.2
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 2.7e-24 116.3 79 75.9
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 5.1e-23 112.1 72 79.2
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.0e-20 102.4 103 55.3
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.4e-19 99.4 103 54.4
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 3.8e-18 95.9 79 60.8
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 6.4e-18 95.1 115 48.7
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 9.3e-17 91.3 103 51.5
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.0e-16 88.6 73 65.8
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 1.3e-13 80.9 124 41.9
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.4e-12 77.4 83 53.0
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.8e-12 77.0 46 82.6
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 5.3e-12 75.5 44 79.5
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 1.3e-10 70.9 45 77.8
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 1.3e-10 70.9 117 44.4
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.3e-06 56.2 63 58.7
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 5.6e-06 55.5 94 37.2


User provided reference genes

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