Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G100.30 Capsicum annuum HOM05D004810 ORTHO05D006272 8.9e-56 219.9 103 100.0
Sopen01g030000 Solanum pennellii HOM05D004810 ORTHO05D006272 2.7e-36 155.2 80 87.5
Nitab4.5_0000222g0280 Nicotiana tabacum HOM05D004810 ORTHO05D006272 1.3e-35 152.9 76 90.8
Nitab4.5_0002994g0090 Nicotiana tabacum HOM05D004810 ORTHO05D006272 1.3e-35 152.9 76 90.8
TAR362G0253 Trochodendron aralioides HOM05D004810 ORTHO05D006272 1.2e-28 129.8 76 71.1
GSVIVG01028203001 Vitis vinifera HOM05D004810 ORTHO05D006272 3.5e-28 128.3 77 74.0
Atru.chr5.899 Acer truncatum HOM05D004810 ORTHO05D006272 7.8e-28 127.1 80 72.5
Duzib138G1217 Durio zibethinus HOM05D004810 ORTHO05D006272 1.7e-27 125.9 72 75.0
DCAR_018250 Daucus carota HOM05D004810 ORTHO05D006272 5.1e-27 124.4 88 65.9
PGR142G2149 Punica granatum HOM05D004810 ORTHO05D006272 6.6e-27 124.0 85 63.5
Prupe.3G004200 Prunus persica HOM05D004810 ORTHO05D006272 1.5e-26 122.9 75 69.3
Thecc.01G322600 Theobroma cacao HOM05D004810 ORTHO05D006272 2.5e-26 122.1 71 76.1
Haze_05120 Corylus avellana HOM05D004810 ORTHO05D006272 3.3e-26 121.7 80 67.5
FvH4_1g26470 Fragaria vesca HOM05D004810 ORTHO05D006272 3.3e-26 121.7 69 73.9
FAN28G1956 Fragaria x ananassa HOM05D004810 ORTHO05D006272 3.3e-26 121.7 69 73.9
Phvul.001G216500 Phaseolus vulgaris HOM05D004810 ORTHO05D006272 3.3e-26 121.7 74 75.7
RcHm_v2.0_Chr3g0486381 Rosa chinensis HOM05D004810 ORTHO05D006272 3.3e-26 121.7 69 73.9
RcHm_v2.0_Chr3g0486491 Rosa chinensis HOM05D004810 ORTHO05D006272 3.3e-26 121.7 69 73.9
HanXRQChr06g0167991 Helianthus annuus HOM05D004810 ORTHO05D006272 4.3e-26 121.3 72 72.2
Lj2C1214G2 Lonicera japonica HOM05D004810 ORTHO05D006272 4.3e-26 121.3 82 67.1
COL.COLO4_23155 Corchorus olitorius HOM05D004810 ORTHO05D006272 5.6e-26 120.9 82 70.7
FAN23G0904 Fragaria x ananassa HOM05D004810 ORTHO05D006272 5.6e-26 120.9 69 73.9
CiPaw.07G123600 Carya illinoinensis HOM05D004810 ORTHO05D006272 7.3e-26 120.6 69 75.4
FAN26G0889 Fragaria x ananassa HOM05D004810 ORTHO05D006272 7.3e-26 120.6 69 72.5
QL12p034348 Quercus lobata HOM05D004810 ORTHO05D006272 7.3e-26 120.6 78 69.2
FAN19G2038 Fragaria x ananassa HOM05D004810 ORTHO05D006272 1.2e-25 119.8 69 72.5
Lj1g0015466 Lotus japonicus HOM05D004810 ORTHO05D006272 1.2e-25 119.8 74 74.3
Aqoxy5G02779 Aquilegia oxysepala HOM05D004810 ORTHO05D006272 1.6e-25 119.4 77 66.2
Cc01_g21880 Coffea canephora HOM05D004810 ORTHO05D006272 1.6e-25 119.4 71 73.2
Lsat_1_v5_gn_8_167321 Lactuca sativa HOM05D004810 ORTHO05D006272 1.6e-25 119.4 75 70.7
Sed0025982 Sechium edule HOM05D004810 ORTHO05D006272 2.1e-25 119.0 69 72.5
MD17G1281800 Malus domestica HOM05D004810 ORTHO05D006272 2.8e-25 118.6 69 73.9
PSO170G6261 Papaver somniferum HOM05D004810 ORTHO05D006272 2.8e-25 118.6 71 73.2
PSO357G0647 Papaver somniferum HOM05D004810 ORTHO05D006272 2.8e-25 118.6 71 73.2
TPR.G4131 Trifolium pratense HOM05D004810 ORTHO05D006272 2.8e-25 118.6 74 74.3
Glyma.19G220100 Glycine max HOM05D004810 ORTHO05D006272 3.6e-25 118.2 74 74.3
A09p01330 Brassica napus HOM05D004810 ORTHO05D006272 4.7e-25 117.9 88 61.4
MD09G1293000 Malus domestica HOM05D004810 ORTHO05D006272 4.7e-25 117.9 69 72.5
Cfa004881 Carpinus fangiana HOM05D004810 ORTHO05D006272 6.2e-25 117.5 80 66.2
AT4G01860 Arabidopsis thaliana HOM05D004810 ORTHO05D006272 8.1e-25 117.1 69 73.9
CDE05G2014 Ceratophyllum demersum HOM05D004810 ORTHO05D006272 8.1e-25 117.1 74 66.2
Lalb_Chr04g0260131 Lupinus albus HOM05D004810 ORTHO05D006272 8.1e-25 117.1 74 73.0
Nn3g21885 Nelumbo nucifera HOM05D004810 ORTHO05D006272 8.1e-25 117.1 74 63.5
Psat3g018400 Pisum sativum HOM05D004810 ORTHO05D006272 8.1e-25 117.1 74 73.0
THA.LOC104825930 Tarenaya hassleriana HOM05D004810 ORTHO05D006272 8.1e-25 117.1 69 71.0
TWI14G1319 Tripterygium wilfordii HOM05D004810 ORTHO05D006272 8.1e-25 117.1 71 74.6
BcaB01g02106 Brassica carinata HOM05D004810 ORTHO05D006272 1.1e-24 116.7 69 69.6
BcaC04g24069 Brassica carinata HOM05D004810 ORTHO05D006272 1.1e-24 116.7 69 69.6
BolC9t53072H Brassica oleracea HOM05D004810 ORTHO05D006272 1.1e-24 116.7 69 69.6
BraA09t35800Z Brassica rapa HOM05D004810 ORTHO05D006272 1.4e-24 116.3 69 68.1
Gohir.A12G121200 Gossypium hirsutum HOM05D004810 ORTHO05D006272 1.4e-24 116.3 72 70.8
Gohir.D12G125000 Gossypium hirsutum HOM05D004810 ORTHO05D006272 1.4e-24 116.3 72 70.8
Gorai.008G136000 Gossypium raimondii HOM05D004810 ORTHO05D006272 1.4e-24 116.3 72 70.8
Medtr7g110260 Medicago truncatula HOM05D004810 ORTHO05D006272 1.4e-24 116.3 74 73.0
AL6G51450 Arabidopsis lyrata HOM05D004810 ORTHO05D006272 1.8e-24 115.9 69 72.5
ATR0796G051 Amborella trichopoda HOM05D004810 ORTHO05D006272 2.4e-24 115.5 72 69.4
Ca_09236_v3 Cicer arietinum L. HOM05D004810 ORTHO05D006272 3.1e-24 115.2 76 71.1
Thhalv10027621m.g Eutrema salsugineum HOM05D004810 ORTHO05D006272 3.1e-24 115.2 82 61.0
C09p01390 Brassica napus HOM05D004810 ORTHO05D006272 4.0e-24 114.8 69 69.6
MELO3C012913.2 Cucumis melo HOM05D004810 ORTHO05D006272 4.0e-24 114.8 69 71.0
CsaV3_3G031590 Cucumis sativus L. HOM05D004810 ORTHO05D006272 4.0e-24 114.8 69 71.0
Carub.0006s3538 Capsella rubella HOM05D004810 ORTHO05D006272 6.8e-24 114.0 69 69.6
CSS0019531 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 8.9e-24 113.6 85 63.5
Ciclev10018506m.g Citrus clementina HOM05D004810 ORTHO05D006272 8.9e-24 113.6 75 70.7
Potri.002G189400 Populus trichocarpa HOM05D004810 ORTHO05D006272 8.9e-24 113.6 71 70.4
arahy.Tifrunner.gnm1.ann1.NAX4N2 Arachis hypogaea HOM05D004810 ORTHO05D006272 1.5e-23 112.8 74 70.3
arahy.Tifrunner.gnm1.ann1.RS5E8T Arachis hypogaea HOM05D004810 ORTHO05D006272 1.5e-23 112.8 74 70.3
Oeu044753.1 Olea europaea HOM05D004810 ORTHO05D006272 2.0e-23 112.5 77 64.9
CSS0014565 Camellia sinensis var. sinensis HOM05D004810 ORTHO05D006272 2.6e-23 112.1 85 62.4
AUR62011731 Chenopodium quinoa HOM05D004810 ORTHO05D006272 2.6e-23 112.1 73 63.0
AUR62024565 Chenopodium quinoa HOM05D004810 ORTHO05D006272 2.6e-23 112.1 73 63.0
Sp6g01700 Schrenkiella parvula HOM05D004810 ORTHO05D006272 2.6e-23 112.1 69 68.1
Aa31LG5G1530 Aethionema arabicum HOM05D004810 ORTHO05D006272 4.4e-23 111.3 69 68.1
Manes.05G010600 Manihot esculenta HOM05D004810 ORTHO05D006272 5.8e-23 110.9 71 69.0
Sabra02G0166300 Salix brachista HOM05D004810 ORTHO05D006272 7.6e-23 110.5 71 69.0
Actinidia21354 Actinidia chinensis HOM05D004810 ORTHO05D006272 9.9e-23 110.2 79 64.6
HPP92_017301 Vanilla planifolia HOM05D004810 ORTHO05D006272 9.9e-23 110.2 79 65.8
Rhsim13G0000700 Rhododendron simsii HOM05D004810 ORTHO05D006272 1.3e-22 109.8 85 62.4
SGA_v2.0_scaffold80G25689 Striga asiatica HOM05D004810 ORTHO05D006272 1.7e-22 109.4 85 58.8
vmacro02367 Vaccinium macrocarpon HOM05D004810 ORTHO05D006272 1.7e-22 109.4 85 61.2
Migut.D00025 Erythranthe guttata HOM05D004810 ORTHO05D006272 1.1e-21 106.7 69 66.7
Dinv12097 Davidia involucrata HOM05D004810 ORTHO05D006272 5.4e-21 104.4 58 77.6
EL10As5g23578 Beta vulgaris HOM05D004810 ORTHO05D006272 7.1e-21 104.0 68 64.7
Eucgr.K00589 Eucalyptus grandis HOM05D004810 ORTHO05D006272 9.2e-21 103.6 72 62.5
MSTRG.21726 Avicennia marina HOM05D004810 ORTHO05D006272 1.2e-20 103.2 69 63.8
Os03g0111800 Oryza sativa ssp. japonica HOM05D004810 ORTHO05D006272 1.6e-20 102.8 75 57.3
MBI18_g09625_MAGBIO Magnolia biondii HOM05D004810 ORTHO05D006272 8.7e-19 97.1 74 56.8
Actinidia06394 Actinidia chinensis HOM05D004810 ORTHO05D006272 2.5e-18 95.5 75 58.7
FAN24G0870 Fragaria x ananassa HOM05D004810 ORTHO05D006272 6.2e-17 90.9 52 71.2
VMungo1383G1823 Vigna mungo HOM05D004810 ORTHO05D006272 5.3e-16 87.8 56 71.4
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 3.4e-15 85.1 46 71.7
SEGI_21204 Sequoiadendron giganteum HOM05D004810 ORTHO05D006272 3.8e-14 81.6 78 51.3
SMO137G0268 Selaginella moellendorffii HOM05D004810 ORTHO05D006272 4.9e-14 81.3 65 49.2
Zm00001eb404090 Zea mays HOM05D004810 ORTHO05D006272 2.7e-12 75.5 51 58.8
Hund09692 Selenicereus undatus HOM05D004810 ORTHO05D006272 6.0e-12 74.3 52 61.5
Mapoly0020s0127 Marchantia polymorpha HOM05D004810 ORTHO05D006272 7.8e-12 73.9 98 37.8
Pp3c3_23690 Physcomitrium patens HOM05D004810 ORTHO05D006272 3.3e-10 68.6 94 41.5
AagrBONN_evm.TU.Sc2ySwM_344.1995 Anthoceros agrestis HOM05D004810 ORTHO05D006272 5.3e-08 61.2 79 43.0
FvH4_2g08080 Fragaria vesca HOM05D004810 ORTHO05D006272 2.6e-07 58.9 50 50.0
FvH4_6g28340 Fragaria vesca HOM05D003050 ORTHO05D006272 3.8e-06 55.1 38 60.5


User provided reference genes

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