Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1.9 Capsicum annuum HOM05D025468 ORTHO05D019542 6.8e-113 410.6 197 100.0
CAN.G82.5 Capsicum annuum HOM05D025468 ORTHO05D019542 1.0e-68 263.8 196 68.9
CAN.G1180.18 Capsicum annuum HOM05D025468 ORTHO05D019542 2.6e-48 196.1 112 85.7
Duzib235G1144 Durio zibethinus HOM05D002881 ORTHO05D002983 1.5e-24 117.1 186 36.6
Thecc.10G091900 Theobroma cacao HOM05D002881 ORTHO05D010329 1.1e-19 100.9 86 50.0
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 1.5e-19 100.5 178 33.7
Thecc.06G098800 Theobroma cacao HOM05D002881 ORTHO05D010329 5.7e-19 98.6 173 32.4
Thecc.04G051200 Theobroma cacao HOM05D002881 ORTHO05D002983 1.3e-18 97.4 122 41.8
Gorai.002G202700 Gossypium raimondii HOM05D002881 ORTHO05D002983 4.1e-17 92.4 125 38.4
Thecc.03G050000 Theobroma cacao HOM05D002881 ORTHO05D010329 1.0e-15 87.8 163 31.9
Ah.02g118830 Amaranthus hybridus HOM05D025468 ORTHO05D019542 2.5e-14 83.2 56 69.6
Thecc.02G249500 Theobroma cacao HOM05D002881 ORTHO05D010329 1.2e-13 80.9 68 50.0
Thecc.02G279500 Theobroma cacao HOM05D002881 ORTHO05D010329 1.8e-12 77.0 87 37.9
Thecc.03G121800 Theobroma cacao HOM05D002881 ORTHO05D002983 5.2e-12 75.5 76 43.4
COL.COLO4_37634 Corchorus olitorius HOM05D035067 ORTHO05D010329 2.6e-11 73.2 91 36.3
MELO3C013661.2 Cucumis melo HOM05D005793 ORTHO05D010329 5.7e-11 72.0 119 34.5
Sed0006040 Sechium edule HOM05D002881 ORTHO05D010329 7.4e-11 71.6 118 36.4
MELO3C027170.2 Cucumis melo HOM05D005793 ORTHO05D010329 2.8e-10 69.7 88 39.8
MELO3C027262.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.3e-10 68.6 81 42.0
TWI23G0459 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 6.3e-10 68.6 93 41.9
CAN.G1001.42 Capsicum annuum HOM05D004909 ORTHO05D009625 2.4e-09 66.6 34 91.2
COL.COLO4_08519 Corchorus olitorius HOM05D035067 ORTHO05D010329 2.4e-09 66.6 91 35.2
TWI56G0801 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 3.1e-09 66.2 93 40.9
CAN.G438.81 Capsicum annuum HOM05D025468 ORTHO05D019542 9.1e-09 64.7 34 91.2
CsaV3_5G027550 Cucumis sativus L. HOM05D005793 ORTHO05D010329 4.5e-08 62.4 98 31.6
MELO3C027473.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.3e-07 60.8 93 34.4
MELO3C033709.2 Cucumis melo HOM05D005793 ORTHO05D010329 6.5e-07 58.5 70 41.4
MELO3C031903.2 Cucumis melo HOM05D005793 ORTHO05D010329 1.5e-06 57.4 58 46.6
Thecc.08G197700 Theobroma cacao HOM05D002881 ORTHO05D010329 4.2e-06 55.8 135 28.9
MELO3C033588.2 Cucumis melo HOM05D005793 ORTHO05D010329 5.5e-06 55.5 54 46.3
MELO3C031989.2 Cucumis melo HOM05D005793 ORTHO05D010329 9.4e-06 54.7 60 43.3


User provided reference genes

Program Settings