Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p74800 Brassica napus HOM05D000896 ORTHO05D000594 2.1e-41 171.8 78 100.0
C09p74810 Brassica napus HOM05D000896 ORTHO05D000594 6.1e-41 170.2 78 98.7
BcaC04g22224 Brassica carinata HOM05D000896 ORTHO05D000594 4.4e-15 84.3 39 92.3
A09p17570 Brassica napus HOM05D000896 ORTHO05D000594 4.4e-15 84.3 39 92.3
C09p21870 Brassica napus HOM05D000896 ORTHO05D000594 4.4e-15 84.3 39 92.3
BolC9t55092H Brassica oleracea HOM05D000896 ORTHO05D000594 4.4e-15 84.3 39 92.3
BraA09t37387Z Brassica rapa HOM05D000896 ORTHO05D000594 4.4e-15 84.3 39 92.3
BcaB07g31212 Brassica carinata HOM05D000896 ORTHO05D000594 5.7e-15 84.0 39 92.3
AT3G24850 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 2.7e-12 75.1 37 81.1
AL3G40940 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 4.6e-12 74.3 37 81.1
AL3G40610 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 5.9e-12 73.9 37 78.4
BolC1t01330H Brassica oleracea HOM05D000896 ORTHO05D000594 2.9e-11 71.6 35 85.7
Carub.0003s2555 Capsella rubella HOM05D000896 ORTHO05D000594 6.6e-11 70.5 37 73.0
AL3G40220 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.1e-10 69.7 37 75.7
AL7G25460 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.1e-10 69.7 38 78.9
AL1G15890 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 2.5e-10 68.6 38 73.7
Carub.0001s0530 Capsella rubella HOM05D000896 ORTHO05D000594 5.6e-10 67.4 38 73.7
AL7G52070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 7.3e-10 67.0 38 73.7
AT5G24050 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.2e-09 66.2 37 67.6
Thhalv10029259m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.1e-09 65.5 37 70.3
Thhalv10029471m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.8e-09 65.1 37 73.0
Thhalv10029136m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 8.0e-09 63.5 34 73.5
AT5G38490 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.4e-08 62.8 38 68.4
AT5G38500 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.8e-08 62.4 38 68.4
BcaC05g27223 Brassica carinata HOM05D000896 ORTHO05D000594 1.8e-08 62.4 35 65.7
A09p34210 Brassica napus HOM05D000896 ORTHO05D000594 1.8e-08 62.4 35 65.7
C05p31330 Brassica napus HOM05D000896 ORTHO05D000594 1.8e-08 62.4 35 65.7
BolC5t31856H Brassica oleracea HOM05D000896 ORTHO05D000594 1.8e-08 62.4 35 65.7
BraA09t38969Z Brassica rapa HOM05D000896 ORTHO05D000594 1.8e-08 62.4 35 65.7
Carub.0007s1353 Capsella rubella HOM05D000896 ORTHO05D000594 1.8e-08 62.4 38 71.1
Thhalv10009508m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 2.3e-08 62.0 37 64.9
AT1G05930 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 3.1e-08 61.6 34 76.5
AL7G52080 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 4.0e-08 61.2 38 68.4
Thhalv10029469m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 6.8e-08 60.5 34 70.6
CARHR291830 Cardamine hirsuta HOM05D000896 ORTHO05D000594 1.2e-07 59.7 37 67.6
BcaB07g32861 Brassica carinata HOM05D000896 ORTHO05D000594 2.6e-07 58.5 35 65.7
SpUn1102_0010 Schrenkiella parvula HOM05D000896 ORTHO05D000594 2.6e-07 58.5 37 67.6
Carub.0007s3741 Capsella rubella HOM05D000896 ORTHO05D000594 3.4e-07 58.2 38 68.4
Sp6g07490 Schrenkiella parvula HOM05D000896 ORTHO05D000594 4.4e-07 57.8 37 64.9
BcaB02g06859 Brassica carinata HOM05D000896 ORTHO05D000594 5.8e-07 57.4 38 65.8
Thhalv10009706m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 5.8e-07 57.4 37 62.2
Thhalv10009730m.g Eutrema salsugineum HOM05D000896 ORTHO05D000594 5.8e-07 57.4 37 62.2
Carub.0322s0001 Capsella rubella HOM05D000896 ORTHO05D000594 9.8e-07 56.6 35 71.4
AT1G32030 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 1.3e-06 56.2 32 62.5
BcaC05g24385 Brassica carinata HOM05D000896 ORTHO05D000594 1.3e-06 56.2 38 65.8
C05p03790 Brassica napus HOM05D000896 ORTHO05D000594 1.3e-06 56.2 38 65.8
BolC5t29156H Brassica oleracea HOM05D000896 ORTHO05D000594 1.3e-06 56.2 38 65.8
CARHR263700 Cardamine hirsuta HOM05D000896 ORTHO05D000594 1.3e-06 56.2 36 66.7
AL1G46070 Arabidopsis lyrata HOM05D000896 ORTHO05D000594 1.7e-06 55.8 30 60.0
AT3G49610 Arabidopsis thaliana HOM05D000896 ORTHO05D000594 2.9e-06 55.1 38 63.2
BcaC05g24317 Brassica carinata HOM05D000896 ORTHO05D000594 4.9e-06 54.3 41 58.5
C05p04280 Brassica napus HOM05D000896 ORTHO05D000594 4.9e-06 54.3 41 58.5
BolC5t29203H Brassica oleracea HOM05D000896 ORTHO05D000594 4.9e-06 54.3 41 58.5


User provided reference genes

Program Settings