Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 6.6e-99 364.0 178 100.0
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.2e-94 349.0 179 97.2
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 1.4e-93 346.3 179 96.6
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.8e-93 345.9 178 94.9
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 3.2e-93 345.1 179 95.5
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 3.2e-93 345.1 178 94.4
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 8.9e-88 327.0 177 88.1
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.4e-85 319.7 178 88.2
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 4.6e-84 314.7 178 86.0
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 6.6e-83 310.8 178 86.0
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 5.6e-82 307.8 175 85.7
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 7.5e-79 297.4 178 80.3
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 2.1e-73 279.3 167 85.6
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.5e-71 273.1 145 89.0
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 2.6e-71 272.3 167 84.4
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 3.8e-70 268.5 156 85.9
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-68 263.1 156 84.6
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 9.0e-64 247.3 185 66.5
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 2.4e-61 239.2 181 70.7
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 4.9e-54 214.9 171 63.2
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.4e-53 213.4 177 53.7
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 5.4e-53 211.5 162 63.6
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 7.1e-53 211.1 186 57.0
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 9.3e-53 210.7 151 66.9
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 9.3e-53 210.7 181 58.0
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.6e-52 209.9 174 61.5
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 2.1e-52 209.5 161 62.7
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 2.7e-52 209.1 144 65.3
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 4.6e-52 208.4 160 58.1
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 4.6e-52 208.4 175 54.3
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 6.0e-52 208.0 174 60.3
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 2.3e-51 206.1 168 59.5
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 3.0e-51 205.7 173 56.6
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.0e-51 205.7 178 57.9
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 3.0e-51 205.7 182 58.2
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 3.9e-51 205.3 170 61.8
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 3.9e-51 205.3 173 57.2
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 6.7e-51 204.5 167 61.7
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 6.7e-51 204.5 163 61.3
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.5e-50 203.4 164 59.8
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 3.3e-50 202.2 173 57.2
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 4.3e-50 201.8 140 63.6
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 4.3e-50 201.8 130 69.2
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 5.6e-50 201.4 175 54.3
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 7.4e-50 201.1 147 62.6
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 9.6e-50 200.7 145 62.1
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.6e-49 199.9 137 62.8
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.6e-49 199.9 141 61.0
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.6e-49 199.9 162 58.6
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 2.1e-49 199.5 185 52.4
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 2.1e-49 199.5 151 63.6
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.8e-49 199.1 121 69.4
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 2.8e-49 199.1 158 60.1
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 3.7e-49 198.7 182 53.8
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 4.8e-49 198.4 140 66.4
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 4.8e-49 198.4 167 59.3
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 4.8e-49 198.4 137 66.4
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 4.8e-49 198.4 167 55.1
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 4.8e-49 198.4 178 53.9
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.1e-48 197.2 178 56.2
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 1.1e-48 197.2 118 70.3
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.4e-48 196.8 147 62.6
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 5.3e-48 194.9 171 53.8
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 6.9e-48 194.5 142 59.9
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.6e-47 192.6 149 58.4
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 7.6e-47 191.0 166 56.0
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 7.6e-47 191.0 174 52.9
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 9.9e-47 190.7 159 59.1
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 9.9e-47 190.7 172 54.1
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 9.9e-47 190.7 166 54.2
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.3e-46 190.3 152 56.6
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.3e-46 190.3 152 56.6
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.3e-46 190.3 152 56.6
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 2.2e-46 189.5 167 56.9
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.9e-46 189.1 164 56.1
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 3.8e-46 188.7 166 53.6
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 3.8e-46 188.7 118 66.1
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 1.1e-45 187.2 152 55.9
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 9.3e-45 184.1 168 51.8
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 7.9e-44 181.0 167 51.5
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.8e-43 179.9 165 52.1
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 5.1e-43 178.3 149 53.7
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 1.9e-42 176.4 126 60.3
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.5e-42 176.0 133 60.2
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 4.8e-41 171.8 165 53.3
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 6.2e-41 171.4 116 63.8
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 2.6e-39 166.0 118 64.4
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 4.5e-39 165.2 140 55.0
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 2.2e-38 162.9 195 48.7
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 5.5e-37 158.3 124 54.8
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 1.3e-35 153.7 138 50.7
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 1.8e-35 153.3 155 46.5
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 6.7e-35 151.4 87 75.9
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.6e-33 146.7 181 45.9
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.8e-25 119.4 88 56.8
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.0e-19 100.9 109 48.6
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.7e-17 92.4 56 69.6
BolC2t10195H Brassica oleracea HOM05D007555 ORTHO05D009521 2.1e-12 76.6 51 88.2
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 6.1e-12 75.1 68 55.9
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 5.2e-11 72.0 175 30.9
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.7e-09 67.0 58 56.9
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 7.7e-07 58.2 87 40.2


User provided reference genes

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