Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 9.0e-128 460.3 237 100.0
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 7.8e-124 447.2 237 98.7
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.3e-123 446.4 237 94.1
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 8.7e-123 443.7 237 94.5
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 6.2e-121 437.6 238 92.9
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 8.7e-115 417.2 237 89.5
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 4.9e-102 374.8 237 80.6
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 3.8e-94 348.6 238 78.6
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 3.2e-93 345.5 237 74.3
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 9.4e-93 344.0 238 75.2
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 3.5e-79 298.9 244 62.7
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 2.2e-65 253.1 237 54.0
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 7.5e-58 228.0 161 70.2
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 6.8e-51 204.9 237 50.2
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 3.4e-50 202.6 237 46.0
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.2e-49 199.9 237 47.3
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.2e-49 199.9 237 47.3
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 2.8e-49 199.5 238 45.4
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 6.3e-49 198.4 236 43.6
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 7.0e-48 194.9 237 46.4
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 2.0e-47 193.4 238 43.7
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 2.0e-47 193.4 240 48.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 2.0e-47 193.4 237 43.5
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 3.5e-47 192.6 238 45.4
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 4.5e-47 192.2 239 43.9
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 5.9e-47 191.8 238 44.5
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 8.6e-46 188.0 239 43.9
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 7.3e-45 184.9 241 41.9
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 1.6e-44 183.7 240 42.1
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 2.1e-44 183.3 242 43.0
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 2.1e-44 183.3 241 43.2
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 4.7e-44 182.2 168 50.6
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 8.0e-44 181.4 237 41.4
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.8e-43 180.3 233 42.1
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 2.3e-43 179.9 239 43.1
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 3.1e-43 179.5 238 42.0
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.1e-43 179.5 238 43.3
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 3.1e-43 179.5 207 46.4
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 6.8e-43 178.3 238 43.3
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 8.9e-43 177.9 238 42.4
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 5.8e-42 175.3 168 50.0
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 7.5e-42 174.9 238 42.0
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 1.7e-41 173.7 241 39.4
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.9e-41 172.9 240 39.2
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 3.7e-41 172.6 233 38.6
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.1e-40 171.0 238 39.1
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 1.4e-40 170.6 182 48.9
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.4e-40 170.6 241 39.0
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 1.9e-40 170.2 163 48.5
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.6e-39 167.2 241 38.2
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 2.0e-39 166.8 237 42.2
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 3.5e-39 166.0 169 46.7
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.5e-39 166.0 242 39.3
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 4.6e-39 165.6 241 38.2
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 4.6e-39 165.6 227 42.3
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 4.6e-39 165.6 201 43.3
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 7.8e-39 164.9 217 42.9
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.0e-38 164.5 241 40.7
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 2.3e-38 163.3 211 42.2
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 3.0e-38 162.9 237 38.0
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 5.0e-38 162.2 217 42.4
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 1.1e-37 161.0 240 40.0
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.5e-37 160.6 171 43.9
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.5e-37 160.6 240 37.1
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 1.9e-37 160.2 168 44.0
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.9e-37 160.2 181 42.0
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 1.9e-37 160.2 168 44.6
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 5.6e-37 158.7 207 42.0
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 5.6e-37 158.7 210 40.5
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 7.3e-37 158.3 212 40.6
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 7.3e-37 158.3 214 41.1
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 2.1e-36 156.8 204 40.2
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 4.0e-35 152.5 241 41.5
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 5.2e-35 152.1 192 43.2
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 2.6e-34 149.8 263 38.0
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 5.8e-34 148.7 169 41.4
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 9.8e-34 147.9 170 41.2
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.3e-33 147.5 171 41.5
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 3.7e-33 146.0 171 40.9
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 6.4e-33 145.2 230 36.5
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 6.4e-33 145.2 171 41.5
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.6e-31 140.6 175 39.4
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 1.0e-30 137.9 180 38.9
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.9e-29 133.7 238 34.0
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 3.3e-29 132.9 240 34.6
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 3.3e-29 132.9 168 38.7
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 7.3e-29 131.7 121 54.5
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 7.3e-29 131.7 181 36.5
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.6e-28 130.6 237 37.6
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 2.1e-28 130.2 194 38.1
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 2.0e-26 123.6 191 38.2
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 4.4e-26 122.5 181 35.4
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 3.6e-20 102.8 158 37.3
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 6.2e-20 102.1 86 52.3
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 1.4e-19 100.9 121 38.8
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 6.8e-19 98.6 122 38.5
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 1.2e-18 97.8 84 58.3
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 6.6e-14 82.0 94 38.3
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 1.9e-13 80.5 76 50.0
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 6.2e-12 75.5 149 34.2
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 1.1e-11 74.7 194 28.9
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.4e-11 73.6 76 51.3
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 4.0e-11 72.8 78 44.9
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.9e-09 65.9 61 54.1
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 6.4e-09 65.5 189 24.9


User provided reference genes

Program Settings