Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p73860 Brassica napus HOM05D006717 ORTHO05D008139 1.5e-55 219.2 103 100.0
C09p73850 Brassica napus HOM05D006717 ORTHO05D008139 1.3e-54 216.1 103 99.0
BolC9t60119H Brassica oleracea HOM05D006717 ORTHO05D008139 3.7e-54 214.5 102 99.0
A10p32920 Brassica napus HOM05D006717 ORTHO05D008139 8.9e-48 193.4 100 92.0
BraA10t45329Z Brassica rapa HOM05D006717 ORTHO05D008139 2.0e-47 192.2 100 92.0
BolC8t50409H Brassica oleracea HOM05D006717 ORTHO05D008139 2.0e-23 112.5 96 61.5
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 3.5e-20 101.7 96 51.0
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 3.5e-20 101.7 96 51.0
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 1.7e-19 99.4 92 50.0
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 2.3e-19 99.0 92 50.0
BraA10t42559Z Brassica rapa HOM05D006717 ORTHO05D008139 1.1e-18 96.7 96 46.9
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 9.0e-16 87.0 92 45.7
A09p45790 Brassica napus HOM05D006717 ORTHO05D008139 1.2e-15 86.7 72 58.3
BraA09t40040Z Brassica rapa HOM05D006717 ORTHO05D008139 1.5e-15 86.3 72 58.3
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.4e-15 85.1 96 43.8
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.4e-14 80.5 96 50.0
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.4e-13 79.7 96 47.9
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 3.5e-12 75.1 92 40.2
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.6e-12 74.7 92 41.3
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.0e-11 73.6 96 41.7
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 8.7e-11 70.5 93 43.0
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 8.7e-11 70.5 93 43.0
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.9e-10 69.3 96 43.8
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 1.6e-09 66.2 93 41.9
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.4e-08 63.2 97 39.2
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 5.3e-08 61.2 96 37.5
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.4e-07 58.5 93 37.6
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 5.8e-07 57.8 99 31.3
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.8e-07 57.8 93 37.6
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 9.9e-07 57.0 72 40.3
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.7e-06 56.2 97 34.0
Thhalv10009471m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.7e-06 56.2 65 41.5
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.2e-06 55.8 92 37.0
BolC5t34110H Brassica oleracea HOM05D006717 ORTHO05D008139 2.9e-06 55.5 34 64.7
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 2.9e-06 55.5 73 37.0
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 3.8e-06 55.1 72 40.3
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 4.9e-06 54.7 73 38.4
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.9e-06 54.7 96 34.4
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.9e-06 54.7 73 37.0
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 8.4e-06 53.9 92 32.6
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.4e-06 53.9 65 41.5
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 8.4e-06 53.9 69 36.2


User provided reference genes

Program Settings