Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p72450 Brassica napus HOM05D003012 ORTHO05D002833 3.0e-72 275.0 132 100.0
A10p31750 Brassica napus HOM05D003012 ORTHO05D002833 4.3e-55 218.0 136 82.4
BolC9t59988H Brassica oleracea HOM05D003012 ORTHO05D002833 4.3e-55 218.0 136 80.1
BraA10t45220Z Brassica rapa HOM05D003012 ORTHO05D002833 4.3e-55 218.0 136 82.4
A10p31770 Brassica napus HOM05D003012 ORTHO05D002833 1.3e-30 136.7 142 54.2
BraA10t45222Z Brassica rapa HOM05D003012 ORTHO05D002833 1.3e-30 136.7 142 54.2
BcaC06g32140 Brassica carinata HOM05D003012 ORTHO05D002833 2.8e-30 135.6 143 53.8
BcaC06g32139 Brassica carinata HOM05D003012 ORTHO05D002833 8.2e-30 134.0 143 53.1
Thhalv10015869m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 9.1e-29 130.6 141 51.1
C09p72440 Brassica napus HOM05D003012 ORTHO05D002833 1.2e-28 130.2 132 56.8
C09p72460 Brassica napus HOM05D003012 ORTHO05D002833 5.9e-28 127.9 154 50.0
BolC9t59987H Brassica oleracea HOM05D003012 ORTHO05D002833 7.2e-26 120.9 132 53.8
BolC9t59989H Brassica oleracea HOM05D003012 ORTHO05D002833 9.4e-26 120.6 119 52.1
A10p31740 Brassica napus HOM05D003012 ORTHO05D002833 2.7e-25 119.0 131 54.2
BraA10t45221Z Brassica rapa HOM05D003012 ORTHO05D002833 6.1e-25 117.9 127 51.2
BcaB04g19638 Brassica carinata HOM05D003012 ORTHO05D002833 1.0e-24 117.1 144 49.3
A10p31760 Brassica napus HOM05D003012 ORTHO05D002833 1.3e-22 110.2 128 49.2
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 1.1e-18 97.1 129 45.7
AT5G04350 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 8.0e-17 90.9 132 43.2
Sp6g38380 Schrenkiella parvula HOM05D003012 ORTHO05D002833 1.7e-14 83.2 103 51.5
BcaC06g32138 Brassica carinata HOM05D003012 ORTHO05D002833 1.3e-11 73.6 72 50.0
Carub.0007s3746 Capsella rubella HOM05D003012 ORTHO05D002833 2.5e-10 69.3 138 34.8
CARHR208940 Cardamine hirsuta HOM05D003012 ORTHO05D002833 2.1e-09 66.2 135 37.8
A07p19700 Brassica napus HOM05D003012 ORTHO05D002833 1.0e-08 63.9 118 35.6
Carub.0007s3750 Capsella rubella HOM05D003012 ORTHO05D002833 1.4e-08 63.5 139 34.5
BcaC08g44379 Brassica carinata HOM05D003012 ORTHO05D002833 4.0e-08 62.0 121 37.2
C06p18130 Brassica napus HOM05D003012 ORTHO05D002833 4.0e-08 62.0 121 37.2
BolC6t37021H Brassica oleracea HOM05D003012 ORTHO05D002833 4.0e-08 62.0 121 37.2
BraA07t29670Z Brassica rapa HOM05D003012 ORTHO05D002833 4.0e-08 62.0 121 37.2
BolC4t26548H Brassica oleracea HOM05D003012 ORTHO05D002833 5.2e-08 61.6 137 35.8
Carub.0007s3747 Capsella rubella HOM05D003012 ORTHO05D002833 8.8e-08 60.8 138 34.1
Carub.0007s3551 Capsella rubella HOM05D008305 ORTHO05D010625 1.5e-07 60.1 117 33.3
BcaB01g05892 Brassica carinata HOM05D003012 ORTHO05D002833 2.6e-07 59.3 138 34.8
C03p01980 Brassica napus HOM05D003012 ORTHO05D002833 2.6e-07 59.3 138 34.8
BolC3t12752H Brassica oleracea HOM05D003012 ORTHO05D002833 2.6e-07 59.3 138 34.8
AL6G13980 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 4.4e-07 58.5 119 37.0
A03p01630 Brassica napus HOM05D003012 ORTHO05D002833 4.4e-07 58.5 138 34.8
BraA03t09538Z Brassica rapa HOM05D003012 ORTHO05D002833 4.4e-07 58.5 138 34.8
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 6.3e-06 54.7 100 37.0
Carub.0007s3550 Capsella rubella HOM05D008305 ORTHO05D010625 6.3e-06 54.7 119 34.5
BcaNung05795 Brassica carinata HOM05D003012 ORTHO05D002833 8.2e-06 54.3 138 34.1


User provided reference genes

Program Settings